RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 Q7L0L9 218 aa24.38■■□□□ 1.49
SYNGR3-202ENST00000562045 VSTM4Q8IW00 320 aa24.38■■□□□ 1.49
SYNGR3-202ENST00000562045 SPC24Q8NBT2 197 aa24.38■■□□□ 1.49
SYNGR3-202ENST00000562045 TCHPQ9BT92 498 aa24.38■■□□□ 1.49
SYNGR3-202ENST00000562045 KLK14Q9P0G3 267 aa24.38■■□□□ 1.49
SYNGR3-202ENST00000562045 INPP5FQ9Y2H2 1132 aa24.38■■□□□ 1.49
SYNGR3-202ENST00000562045 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.38■■□□□ 1.49
SYNGR3-202ENST00000562045 GOLGA6L6A8MZA4 724 aa24.37■■□□□ 1.49
SYNGR3-202ENST00000562045 MEFVO15553 781 aaPredicted RBP24.37■■□□□ 1.49
SYNGR3-202ENST00000562045 TEX33O43247 280 aa24.37■■□□□ 1.49
SYNGR3-202ENST00000562045 VWA3BQ502W6 1294 aa24.37■■□□□ 1.49
SYNGR3-202ENST00000562045 ZBTB41Q5SVQ8 909 aa24.37■■□□□ 1.49
SYNGR3-202ENST00000562045 PPP2R2DQ66LE6 453 aa24.37■■□□□ 1.49
SYNGR3-202ENST00000562045 PGBD4Q96DM1 585 aa24.37■■□□□ 1.49
SYNGR3-202ENST00000562045 TMEM117Q9H0C3 514 aa24.37■■□□□ 1.49
SYNGR3-202ENST00000562045 NDST4Q9H3R1 872 aa24.37■■□□□ 1.49
SYNGR3-202ENST00000562045 RSAD1Q9HA92 442 aa24.37■■□□□ 1.49
SYNGR3-202ENST00000562045 SLC28A3Q9HAS3 691 aa24.37■■□□□ 1.49
SYNGR3-202ENST00000562045 MIOSQ9NXC5 875 aa24.37■■□□□ 1.49
SYNGR3-202ENST00000562045 TRANK1O15050 2925 aa24.37■■□□□ 1.49
SYNGR3-202ENST00000562045 TDRD15B5MCY1 1934 aaKnown RBP24.37■■□□□ 1.49
SYNGR3-202ENST00000562045 MAPK13O15264 365 aa24.36■■□□□ 1.49
SYNGR3-202ENST00000562045 MLH1P40692 756 aa24.36■■□□□ 1.49
SYNGR3-202ENST00000562045 UBXN1Q04323 297 aa24.36■■□□□ 1.49
SYNGR3-202ENST00000562045 MCL1Q07820 350 aa24.36■■□□□ 1.49
SYNGR3-202ENST00000562045 HSP90AA2PQ14568 343 aaPredicted RBP24.36■■□□□ 1.49
SYNGR3-202ENST00000562045 DCAF4L1Q3SXM0 396 aa24.36■■□□□ 1.49
SYNGR3-202ENST00000562045 FKBP15Q5T1M5 1219 aa24.36■■□□□ 1.49
SYNGR3-202ENST00000562045 THNSL1Q8IYQ7 743 aa24.36■■□□□ 1.49
SYNGR3-202ENST00000562045 CMTR2Q8IYT2 770 aaKnown RBP24.36■■□□□ 1.49
SYNGR3-202ENST00000562045 FAM161BQ96MY7 647 aa24.36■■□□□ 1.49
SYNGR3-202ENST00000562045 GAD1Q99259 594 aa24.36■■□□□ 1.49
SYNGR3-202ENST00000562045 C17orf80Q9BSJ5 609 aa24.36■■□□□ 1.49
SYNGR3-202ENST00000562045 MTUS1Q9ULD2 1270 aa24.36■■□□□ 1.49
SYNGR3-202ENST00000562045 FAM189A1O60320 539 aa24.35■■□□□ 1.49
SYNGR3-202ENST00000562045 B4GALT3O60512 393 aa24.35■■□□□ 1.49
SYNGR3-202ENST00000562045 NOLC1Q14978 699 aaKnown RBP eCLIP24.35■■□□□ 1.49
SYNGR3-202ENST00000562045 FIBCD1Q8N539 461 aa24.35■■□□□ 1.49
SYNGR3-202ENST00000562045 GSTCDQ8NEC7 633 aa24.35■■□□□ 1.49
SYNGR3-202ENST00000562045 ZSWIM2Q8NEG5 633 aa24.35■■□□□ 1.49
SYNGR3-202ENST00000562045 PARP2Q9UGN5 583 aa24.35■■□□□ 1.49
SYNGR3-202ENST00000562045 RALGAPA2Q2PPJ7 1873 aa24.35■■□□□ 1.49
SYNGR3-202ENST00000562045 CITO14578 2027 aa24.35■■□□□ 1.49
SYNGR3-202ENST00000562045 ARL5CA6NH57 179 aa24.35■■□□□ 1.49
SYNGR3-202ENST00000562045 EPOPA6NHQ4 379 aa24.35■■□□□ 1.49
SYNGR3-202ENST00000562045 CLDN3O15551 220 aa24.35■■□□□ 1.49
SYNGR3-202ENST00000562045 RECQL4O94761 1208 aa24.35■■□□□ 1.49
SYNGR3-202ENST00000562045 PTMAP06454 111 aaKnown RBP24.35■■□□□ 1.49
SYNGR3-202ENST00000562045 MCF2P10911 925 aa24.35■■□□□ 1.49
SYNGR3-202ENST00000562045 SPECC1LQ69YQ0 1117 aa24.35■■□□□ 1.49
SYNGR3-202ENST00000562045 INTS8Q75QN2 995 aaKnown RBP24.35■■□□□ 1.49
SYNGR3-202ENST00000562045 TMC6Q7Z403 805 aa24.35■■□□□ 1.49
SYNGR3-202ENST00000562045 BORCS6Q96GS4 357 aa24.35■■□□□ 1.49
SYNGR3-202ENST00000562045 ZNF576Q9H609 170 aa24.35■■□□□ 1.49
SYNGR3-202ENST00000562045 CWH43Q9H720 699 aa24.35■■□□□ 1.49
SYNGR3-202ENST00000562045 KIAA1586Q9HCI6 787 aa24.35■■□□□ 1.49
SYNGR3-202ENST00000562045 IMPACTQ9P2X3 320 aa24.35■■□□□ 1.49
SYNGR3-202ENST00000562045 PLAGL2Q9UPG8 496 aa24.35■■□□□ 1.49
SYNGR3-202ENST00000562045 A0A0B4J269 797 aa24.34■■□□□ 1.49
SYNGR3-202ENST00000562045 POMCP01189 267 aa24.34■■□□□ 1.49
SYNGR3-202ENST00000562045 PBX1P40424 430 aa24.34■■□□□ 1.49
SYNGR3-202ENST00000562045 TNFSF9P41273 254 aa24.34■■□□□ 1.49
SYNGR3-202ENST00000562045 MATR3P43243 847 aaKnown RBP eCLIP24.34■■□□□ 1.49
SYNGR3-202ENST00000562045 ABI1Q8IZP0 508 aa24.34■■□□□ 1.49
SYNGR3-202ENST00000562045 GPD1LQ8N335 351 aa24.34■■□□□ 1.49
SYNGR3-202ENST00000562045 FBXL18Q96ME1 805 aa24.34■■□□□ 1.49
SYNGR3-202ENST00000562045 TBC1D13Q9NVG8 400 aa24.34■■□□□ 1.49
SYNGR3-202ENST00000562045 RNF216Q9NWF9 866 aaPredicted RBP24.34■■□□□ 1.49
SYNGR3-202ENST00000562045 MYO9BQ13459 2157 aa24.33■■□□□ 1.49
SYNGR3-202ENST00000562045 EYSQ5T1H1 3165 aa24.33■■□□□ 1.49
SYNGR3-202ENST00000562045 A0A1W2PQC6 194 aa24.33■■□□□ 1.49
SYNGR3-202ENST00000562045 HOXA2O43364 376 aa24.33■■□□□ 1.49
SYNGR3-202ENST00000562045 LDHAP00338 332 aaKnown RBP24.33■■□□□ 1.49
SYNGR3-202ENST00000562045 KRT13P13646 458 aa24.33■■□□□ 1.49
SYNGR3-202ENST00000562045 GRM5P41594 1212 aa24.33■■□□□ 1.49
SYNGR3-202ENST00000562045 SNRNP35Q16560 246 aaKnown RBP24.33■■□□□ 1.49
SYNGR3-202ENST00000562045 NOMO2Q5JPE7 1267 aa24.33■■□□□ 1.49
SYNGR3-202ENST00000562045 GLB1LQ6UWU2 654 aa24.33■■□□□ 1.49
SYNGR3-202ENST00000562045 RDH13Q8NBN7 331 aa24.33■■□□□ 1.49
SYNGR3-202ENST00000562045 SAAL1Q96ER3 474 aa24.33■■□□□ 1.49
SYNGR3-202ENST00000562045 ANK1P16157 1881 aa24.33■■□□□ 1.48
SYNGR3-202ENST00000562045 PBX3P40426 434 aa24.32■■□□□ 1.48
SYNGR3-202ENST00000562045 SCNN1GP51170 649 aa24.32■■□□□ 1.48
SYNGR3-202ENST00000562045 BFSP1Q12934 665 aa24.32■■□□□ 1.48
SYNGR3-202ENST00000562045 DCAF17Q5H9S7 520 aaPredicted RBP24.32■■□□□ 1.48
SYNGR3-202ENST00000562045 TCERG1LQ5VWI1 586 aa24.32■■□□□ 1.48
SYNGR3-202ENST00000562045 ZNF280BQ86YH2 543 aa24.32■■□□□ 1.48
SYNGR3-202ENST00000562045 MSTO1Q9BUK6 570 aa24.32■■□□□ 1.48
SYNGR3-202ENST00000562045 AGO2Q9UKV8 859 aaKnown RBP24.32■■□□□ 1.48
SYNGR3-202ENST00000562045 GIT1Q9Y2X7 761 aa24.32■■□□□ 1.48
SYNGR3-202ENST00000562045 ITIH6Q6UXX5 1313 aa24.32■■□□□ 1.48
SYNGR3-202ENST00000562045 COL4A4P53420 1690 aaPredicted RBP24.32■■□□□ 1.48
SYNGR3-202ENST00000562045 GOLGA8IPA6NC78 632 aa24.32■■□□□ 1.48
SYNGR3-202ENST00000562045 GOLGA8JA6NMD2 632 aa24.32■■□□□ 1.48
SYNGR3-202ENST00000562045 RFXAPO00287 272 aa24.32■■□□□ 1.48
SYNGR3-202ENST00000562045 EXTL3O43909 919 aa24.32■■□□□ 1.48
SYNGR3-202ENST00000562045 CLP1Q92989 425 aaKnown RBP24.32■■□□□ 1.48
SYNGR3-202ENST00000562045 SLC35C1Q96A29 364 aa24.32■■□□□ 1.48
SYNGR3-202ENST00000562045 PDCD11Q14690 1871 aaKnown RBP24.32■■□□□ 1.48
SYNGR3-202ENST00000562045 REV3LO60673 3130 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms