RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-222ENST00000561431 ADAM15Q13444 863 aa5.02□□□□□ -1.61
LRRC28-222ENST00000561431 TOP3AQ13472 1001 aaPredicted RBP5.02□□□□□ -1.61
LRRC28-222ENST00000561431 MYBPC2Q14324 1141 aa5.02□□□□□ -1.61
LRRC28-222ENST00000561431 MLC1Q15049 377 aa5.02□□□□□ -1.61
LRRC28-222ENST00000561431 EIF4HQ15056 248 aaKnown RBP5.02□□□□□ -1.61
LRRC28-222ENST00000561431 PCOLCEQ15113 449 aa5.02□□□□□ -1.61
LRRC28-222ENST00000561431 NOMO1Q15155 1222 aa5.02□□□□□ -1.61
LRRC28-222ENST00000561431 VWA3BQ502W6 1294 aa5.02□□□□□ -1.61
LRRC28-222ENST00000561431 C4orf46Q504U0 113 aa5.02□□□□□ -1.61
LRRC28-222ENST00000561431 PRR31Q5SQ13 230 aa5.02□□□□□ -1.61
LRRC28-222ENST00000561431 TMEM240Q5SV17 173 aa5.02□□□□□ -1.61
LRRC28-222ENST00000561431 IFIT1BQ5T764 474 aaKnown RBP5.02□□□□□ -1.61
LRRC28-222ENST00000561431 KRT40Q6A162 431 aa5.02□□□□□ -1.61
LRRC28-222ENST00000561431 BTNL9Q6UXG8 535 aa5.02□□□□□ -1.61
LRRC28-222ENST00000561431 TSHZ1Q6ZSZ6 1077 aa5.02□□□□□ -1.61
LRRC28-222ENST00000561431 RALYLQ86SE5 291 aaKnown RBP5.02□□□□□ -1.61
LRRC28-222ENST00000561431 LYSMD2Q8IV50 215 aa5.02□□□□□ -1.61
LRRC28-222ENST00000561431 TPH2Q8IWU9 490 aa5.02□□□□□ -1.61
LRRC28-222ENST00000561431 REXO1L1PQ8IX06 675 aa5.02□□□□□ -1.61
LRRC28-222ENST00000561431 CMTR2Q8IYT2 770 aaKnown RBP5.02□□□□□ -1.61
LRRC28-222ENST00000561431 KLHL36Q8N4N3 616 aa5.02□□□□□ -1.61
LRRC28-222ENST00000561431 GLB1L3Q8NCI6 653 aaPredicted RBP5.02□□□□□ -1.61
LRRC28-222ENST00000561431 ADAMTS17Q8TE56 1095 aa5.02□□□□□ -1.61
LRRC28-222ENST00000561431 TSPEARQ8WU66 669 aa5.02□□□□□ -1.61
LRRC28-222ENST00000561431 DDX17Q92841 729 aaKnown RBP5.02□□□□□ -1.61
LRRC28-222ENST00000561431 YTHDC1Q96MU7 727 aaKnown RBP5.02□□□□□ -1.61
LRRC28-222ENST00000561431 CAMKK2Q96RR4 588 aa5.02□□□□□ -1.61
LRRC28-222ENST00000561431 RTFDC1Q9BY42 306 aaPredicted RBP5.02□□□□□ -1.61
LRRC28-222ENST00000561431 RHOBTB2Q9BYZ6 727 aa5.02□□□□□ -1.61
LRRC28-222ENST00000561431 JADE2Q9NQC1 790 aa5.02□□□□□ -1.61
LRRC28-222ENST00000561431 ZNF277Q9NRM2 450 aaPredicted RBP5.02□□□□□ -1.61
LRRC28-222ENST00000561431 RGS17Q9UGC6 210 aaPredicted RBP5.02□□□□□ -1.61
LRRC28-222ENST00000561431 SRRDQ9UH36 339 aa5.02□□□□□ -1.61
LRRC28-222ENST00000561431 INTUQ9ULD6 942 aa5.02□□□□□ -1.61
LRRC28-222ENST00000561431 RBM8AQ9Y5S9 174 aaKnown RBP5.02□□□□□ -1.61
LRRC28-222ENST00000561431 TULP4Q9NRJ4 1543 aa5.02□□□□□ -1.61
LRRC28-222ENST00000561431 TOPAZ1Q8N9V7 1692 aa5.02□□□□□ -1.61
LRRC28-222ENST00000561431 SPATA31A6Q5VVP1 1343 aa5.01□□□□□ -1.61
LRRC28-222ENST00000561431 ANKARQ7Z5J8 1434 aa5.01□□□□□ -1.61
LRRC28-222ENST00000561431 SH3D21A4FU49 640 aa5.01□□□□□ -1.61
LRRC28-222ENST00000561431 AKR1B10O60218 316 aa5.01□□□□□ -1.61
LRRC28-222ENST00000561431 DTNBO60941 627 aa5.01□□□□□ -1.61
LRRC28-222ENST00000561431 PAX3P23760 479 aa5.01□□□□□ -1.61
LRRC28-222ENST00000561431 PER3P56645 1201 aa5.01□□□□□ -1.61
LRRC28-222ENST00000561431 GJA9P57773 515 aa5.01□□□□□ -1.61
LRRC28-222ENST00000561431 CD69Q07108 199 aa5.01□□□□□ -1.61
LRRC28-222ENST00000561431 KIAA2012Q0VF49 1180 aa5.01□□□□□ -1.61
LRRC28-222ENST00000561431 ADRM1Q16186 407 aa5.01□□□□□ -1.61
LRRC28-222ENST00000561431 ANO4Q32M45 955 aa5.01□□□□□ -1.61
LRRC28-222ENST00000561431 ZMAT1Q5H9K5 638 aa5.01□□□□□ -1.61
LRRC28-222ENST00000561431 FAM26FQ5R3K3 315 aa5.01□□□□□ -1.61
LRRC28-222ENST00000561431 FAM102BQ5T8I3 360 aa5.01□□□□□ -1.61
LRRC28-222ENST00000561431 WDR78Q5VTH9 848 aa5.01□□□□□ -1.61
LRRC28-222ENST00000561431 CLIP3Q96DZ5 547 aa5.01□□□□□ -1.61
LRRC28-222ENST00000561431 SORCS2Q96PQ0 1159 aa5.01□□□□□ -1.61
LRRC28-222ENST00000561431 PRAM1Q96QH2 718 aa5.01□□□□□ -1.61
LRRC28-222ENST00000561431 UHRF1Q96T88 793 aaPredicted RBP5.01□□□□□ -1.61
LRRC28-222ENST00000561431 OSBPL6Q9BZF3 934 aa5.01□□□□□ -1.61
LRRC28-222ENST00000561431 KIAA1683Q9H0B3 1180 aa5.01□□□□□ -1.61
LRRC28-222ENST00000561431 GREM2Q9H772 168 aa5.01□□□□□ -1.61
LRRC28-222ENST00000561431 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.01□□□□□ -1.61
LRRC28-222ENST00000561431 NCDNQ9UBB6 729 aa5.01□□□□□ -1.61
LRRC28-222ENST00000561431 RCAN3Q9UKA8 241 aa5.01□□□□□ -1.61
LRRC28-222ENST00000561431 PNMA2Q9UL42 364 aa5.01□□□□□ -1.61
LRRC28-222ENST00000561431 PNMA8BQ9ULN7 279 aaPredicted RBP5.01□□□□□ -1.61
LRRC28-222ENST00000561431 VWA7Q9Y334 891 aa5.01□□□□□ -1.61
LRRC28-222ENST00000561431 COMMD10Q9Y6G5 202 aa5.01□□□□□ -1.61
LRRC28-222ENST00000561431 RGPD8O14715 1765 aaPredicted RBP5.01□□□□□ -1.61
LRRC28-222ENST00000561431 ATP7BP35670 1465 aa5□□□□□ -1.61
LRRC28-222ENST00000561431 ABCA3Q99758 1704 aa5□□□□□ -1.61
LRRC28-222ENST00000561431 TRPM3Q9HCF6 1732 aaPredicted RBP5□□□□□ -1.61
LRRC28-222ENST00000561431 MROH6A6NGR9 719 aa5□□□□□ -1.61
LRRC28-222ENST00000561431 OFD1O75665 1012 aa5□□□□□ -1.61
LRRC28-222ENST00000561431 RFPL1O75677 317 aa5□□□□□ -1.61
LRRC28-222ENST00000561431 LY86O95711 162 aa5□□□□□ -1.61
LRRC28-222ENST00000561431 FSHBP01225 129 aa5□□□□□ -1.61
LRRC28-222ENST00000561431 ZNF888P0CJ79 500 aaPredicted RBP5□□□□□ -1.61
LRRC28-222ENST00000561431 HSPA6P17066 643 aa5□□□□□ -1.61
LRRC28-222ENST00000561431 ADSLP30566 484 aaPredicted RBP5□□□□□ -1.61
LRRC28-222ENST00000561431 ADKP55263 362 aaKnown RBP5□□□□□ -1.61
LRRC28-222ENST00000561431 DLX2Q07687 328 aaPredicted RBP5□□□□□ -1.61
LRRC28-222ENST00000561431 MINDY4Q4G0A6 757 aa5□□□□□ -1.61
LRRC28-222ENST00000561431 CXorf57Q6NSI4 855 aaKnown RBP5□□□□□ -1.61
LRRC28-222ENST00000561431 BORAQ6PGQ7 559 aa5□□□□□ -1.61
LRRC28-222ENST00000561431 LARP4Q71RC2 724 aaKnown RBP eCLIP5□□□□□ -1.61
LRRC28-222ENST00000561431 MIGA2Q7L4E1 593 aa5□□□□□ -1.61
LRRC28-222ENST00000561431 C14orf80Q86SX3 495 aa5□□□□□ -1.61
LRRC28-222ENST00000561431 NRG4Q8WWG1 115 aa5□□□□□ -1.61
LRRC28-222ENST00000561431 SIN3AQ96ST3 1273 aa5□□□□□ -1.61
LRRC28-222ENST00000561431 NUP88Q99567 741 aaPredicted RBP5□□□□□ -1.61
LRRC28-222ENST00000561431 SENP7Q9BQF6 1050 aa5□□□□□ -1.61
LRRC28-222ENST00000561431 FDXACB1Q9BRP7 624 aaPredicted RBP5□□□□□ -1.61
LRRC28-222ENST00000561431 DMRT3Q9NQL9 472 aa5□□□□□ -1.61
LRRC28-222ENST00000561431 RBM12Q9NTZ6 932 aaKnown RBP5□□□□□ -1.61
LRRC28-222ENST00000561431 USP40Q9NVE5 1235 aa5□□□□□ -1.61
LRRC28-222ENST00000561431 GEMIN8Q9NWZ8 242 aaKnown RBP5□□□□□ -1.61
LRRC28-222ENST00000561431 NR2E1Q9Y466 385 aa5□□□□□ -1.61
LRRC28-222ENST00000561431 CRYBG1Q9Y4K1 1723 aa5□□□□□ -1.61
LRRC28-222ENST00000561431 RPTORQ8N122 1335 aa4.99□□□□□ -1.61
LRRC28-222ENST00000561431 QRICH2Q9H0J4 1663 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms