RNA–Protein interactions for RNA: ENST00000561090.5

IPO4-217, Transcript of importin 4, human

TSL 2

Gene IPO4, Length 3,632 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IPO4-217	ENST00000561090	EDN1	P05305	212 aa		12	□□□□□ -0.49
IPO4-217	ENST00000561090	CHRNB2	P17787	502 aa		12	□□□□□ -0.49
IPO4-217	ENST00000561090	ELF1	P32519	619 aa		12	□□□□□ -0.49
IPO4-217	ENST00000561090	ORC1	Q13415	861 aa		12	□□□□□ -0.49
IPO4-217	ENST00000561090	TRIP13	Q15645	432 aa	Predicted RBP	12	□□□□□ -0.49
IPO4-217	ENST00000561090	DCAF12L1	Q5VU92	463 aa		12	□□□□□ -0.49
IPO4-217	ENST00000561090	EMB	Q6PCB8	327 aa		12	□□□□□ -0.49
IPO4-217	ENST00000561090	RNF149	Q8NC42	400 aa		12	□□□□□ -0.49
IPO4-217	ENST00000561090	CDHR1	Q96JP9	859 aa		12	□□□□□ -0.49
IPO4-217	ENST00000561090	INO80B	Q9C086	356 aa	Predicted RBP	12	□□□□□ -0.49
IPO4-217	ENST00000561090	NEUROG2	Q9H2A3	272 aa		12	□□□□□ -0.49
IPO4-217	ENST00000561090	DNAJC17	Q9NVM6	304 aa	Known RBP	12	□□□□□ -0.49
IPO4-217	ENST00000561090	CNOT8	Q9UFF9	292 aa	Known RBP	12	□□□□□ -0.49
IPO4-217	ENST00000561090	PCDHB4	Q9Y5E5	795 aa		12	□□□□□ -0.49
IPO4-217	ENST00000561090	KIAA1217	Q5T5P2	1943 aa		12	□□□□□ -0.49
IPO4-217	ENST00000561090	UMODL1	Q5DID0	1318 aa		12	□□□□□ -0.49
IPO4-217	ENST00000561090	TCRBV7S2A1N4T	A0A589	114 aa		12	□□□□□ -0.49
IPO4-217	ENST00000561090	HLA-DRA	P01903	254 aa		12	□□□□□ -0.49
IPO4-217	ENST00000561090	KRT19	P08727	400 aa		12	□□□□□ -0.49
IPO4-217	ENST00000561090	FAM133B	Q5BKY9	247 aa	Known RBP	12	□□□□□ -0.49
IPO4-217	ENST00000561090	CCDC25	Q86WR0	208 aa		12	□□□□□ -0.49
IPO4-217	ENST00000561090	OR5B17	Q8NGF7	314 aa		12	□□□□□ -0.49
IPO4-217	ENST00000561090	PBK	Q96KB5	322 aa		12	□□□□□ -0.49
IPO4-217	ENST00000561090	C11orf70	Q9BRQ4	267 aa		12	□□□□□ -0.49
IPO4-217	ENST00000561090	HEMGN	Q9BXL5	484 aa		12	□□□□□ -0.49
IPO4-217	ENST00000561090	EPN3	Q9H201	632 aa		12	□□□□□ -0.49
IPO4-217	ENST00000561090	TMEM8A	Q9HCN3	771 aa		12	□□□□□ -0.49
IPO4-217	ENST00000561090	RNF19A	Q9NV58	838 aa		12	□□□□□ -0.49
IPO4-217	ENST00000561090	KLHL11	Q9NVR0	708 aa		12	□□□□□ -0.49
IPO4-217	ENST00000561090	ATAD5	Q96QE3	1844 aa		12	□□□□□ -0.49
IPO4-217	ENST00000561090	STBD1	O95210	358 aa		12	□□□□□ -0.49
IPO4-217	ENST00000561090	TFAM	Q00059	246 aa	Known RBP	12	□□□□□ -0.49
IPO4-217	ENST00000561090	PTGIS	Q16647	500 aa		12	□□□□□ -0.49
IPO4-217	ENST00000561090	ZNF564	Q8TBZ8	553 aa	Predicted RBP	12	□□□□□ -0.49
IPO4-217	ENST00000561090	MAP3K20	Q9NYL2	800 aa	Known RBP	12	□□□□□ -0.49
IPO4-217	ENST00000561090	FBXL5	Q9UKA1	691 aa		12	□□□□□ -0.49
IPO4-217	ENST00000561090	CP	P00450	1065 aa		11.99	□□□□□ -0.49
IPO4-217	ENST00000561090	FDX1	P10109	184 aa		11.99	□□□□□ -0.49
IPO4-217	ENST00000561090	PLTP	P55058	493 aa		11.99	□□□□□ -0.49
IPO4-217	ENST00000561090	FMO1	Q01740	532 aa		11.99	□□□□□ -0.49
IPO4-217	ENST00000561090	C9orf131	Q5VYM1	1079 aa		11.99	□□□□□ -0.49
IPO4-217	ENST00000561090	ALS2CL	Q60I27	953 aa		11.99	□□□□□ -0.49
IPO4-217	ENST00000561090	CCDC50	Q8IVM0	306 aa		11.99	□□□□□ -0.49
IPO4-217	ENST00000561090	C18orf8	Q96DM3	657 aa		11.99	□□□□□ -0.49
IPO4-217	ENST00000561090	HAPLN2	Q9GZV7	340 aa		11.99	□□□□□ -0.49
IPO4-217	ENST00000561090	ANAPC7	Q9UJX3	599 aa		11.99	□□□□□ -0.49
IPO4-217	ENST00000561090	ATP8A1	Q9Y2Q0	1164 aa		11.99	□□□□□ -0.49
IPO4-217	ENST00000561090	GSTTP1	A0A1W2PQM5	241 aa		11.99	□□□□□ -0.49
IPO4-217	ENST00000561090	VIM	P08670	466 aa	Known RBP	11.99	□□□□□ -0.49
IPO4-217	ENST00000561090	MDH1	P40925	334 aa	Known RBP	11.99	□□□□□ -0.49
IPO4-217	ENST00000561090	KIF22	Q14807	665 aa		11.99	□□□□□ -0.49
IPO4-217	ENST00000561090	FAM182A	Q5T1J6	154 aa		11.99	□□□□□ -0.49
IPO4-217	ENST00000561090	LBX2	Q6XYB7	198 aa		11.99	□□□□□ -0.49
IPO4-217	ENST00000561090	TBC1D1	Q86TI0	1168 aa	Predicted RBP	11.99	□□□□□ -0.49
IPO4-217	ENST00000561090	CEP120	Q8N960	986 aa		11.99	□□□□□ -0.49
IPO4-217	ENST00000561090	OLIG1	Q8TAK6	271 aa		11.99	□□□□□ -0.49
IPO4-217	ENST00000561090	MGARP	Q8TDB4	240 aa		11.99	□□□□□ -0.49
IPO4-217	ENST00000561090	HELQ	Q8TDG4	1101 aa		11.99	□□□□□ -0.49
IPO4-217	ENST00000561090	NXF1	Q9UBU9	619 aa	Known RBP	11.99	□□□□□ -0.49
IPO4-217	ENST00000561090	MAFG	O15525	162 aa		11.99	□□□□□ -0.49
IPO4-217	ENST00000561090	CLDN3	O15551	220 aa		11.99	□□□□□ -0.49
IPO4-217	ENST00000561090	DKC1	O60832	514 aa	Known RBP eCLIP	11.99	□□□□□ -0.49
IPO4-217	ENST00000561090	CLCN3	P51790	818 aa		11.99	□□□□□ -0.49
IPO4-217	ENST00000561090	KCTD2	Q14681	263 aa		11.99	□□□□□ -0.49
IPO4-217	ENST00000561090	BRDT	Q58F21	947 aa	Predicted RBP	11.99	□□□□□ -0.49
IPO4-217	ENST00000561090	CACNA2D3	Q8IZS8	1091 aa		11.99	□□□□□ -0.49
IPO4-217	ENST00000561090	C1orf54	Q8WWF1	131 aa		11.99	□□□□□ -0.49
IPO4-217	ENST00000561090	MAGOHB	Q96A72	148 aa	Known RBP	11.99	□□□□□ -0.49
IPO4-217	ENST00000561090	CYFIP2	Q96F07	1278 aa		11.99	□□□□□ -0.49
IPO4-217	ENST00000561090	SPATA33	Q96N06	139 aa		11.99	□□□□□ -0.49
IPO4-217	ENST00000561090	MYH9	P35579	1960 aa	Known RBP	11.99	□□□□□ -0.49
IPO4-217	ENST00000561090	SYNGAP1	Q96PV0	1343 aa		11.98	□□□□□ -0.49
IPO4-217	ENST00000561090	IREB2	P48200	963 aa	Known RBP	11.98	□□□□□ -0.49
IPO4-217	ENST00000561090	NFIL3	Q16649	462 aa		11.98	□□□□□ -0.49
IPO4-217	ENST00000561090	SWT1	Q5T5J6	900 aa	Known RBP	11.98	□□□□□ -0.49
IPO4-217	ENST00000561090	TDRD10	Q5VZ19	366 aa	Known RBP	11.98	□□□□□ -0.49
IPO4-217	ENST00000561090	CNPY4	Q8N129	248 aa		11.98	□□□□□ -0.49
IPO4-217	ENST00000561090	SUCLA2	Q9P2R7	463 aa	Predicted RBP	11.98	□□□□□ -0.49
IPO4-217	ENST00000561090	RNF14	Q9UBS8	474 aa		11.98	□□□□□ -0.49
IPO4-217	ENST00000561090	STK38L	Q9Y2H1	464 aa		11.98	□□□□□ -0.49
IPO4-217	ENST00000561090	SHOX2	O60902	331 aa	Predicted RBP	11.98	□□□□□ -0.49
IPO4-217	ENST00000561090	RTN2	O75298	545 aa		11.98	□□□□□ -0.49
IPO4-217	ENST00000561090	WEE2	P0C1S8	567 aa		11.98	□□□□□ -0.49
IPO4-217	ENST00000561090	MYBL1	P10243	752 aa		11.98	□□□□□ -0.49
IPO4-217	ENST00000561090	PYGM	P11217	842 aa		11.98	□□□□□ -0.49
IPO4-217	ENST00000561090	RRM1	P23921	792 aa		11.98	□□□□□ -0.49
IPO4-217	ENST00000561090	USP37	Q86T82	979 aa		11.98	□□□□□ -0.49
IPO4-217	ENST00000561090	FAM71A	Q8IYT1	594 aa		11.98	□□□□□ -0.49
IPO4-217	ENST00000561090	ACSF2	Q96CM8	615 aa	Predicted RBP	11.98	□□□□□ -0.49
IPO4-217	ENST00000561090	OPTN	Q96CV9	577 aa		11.98	□□□□□ -0.49
IPO4-217	ENST00000561090	ATP6V1G3	Q96LB4	118 aa		11.98	□□□□□ -0.49
IPO4-217	ENST00000561090	NRBP2	Q9NSY0	501 aa		11.98	□□□□□ -0.49
IPO4-217	ENST00000561090	COL11A1	P12107	1806 aa	Predicted RBP	11.98	□□□□□ -0.49
IPO4-217	ENST00000561090	FER1L6	Q2WGJ9	1857 aa		11.98	□□□□□ -0.49
IPO4-217	ENST00000561090	THAP12	O43422	761 aa		11.98	□□□□□ -0.49
IPO4-217	ENST00000561090	FARP2	O94887	1054 aa	Predicted RBP	11.98	□□□□□ -0.49
IPO4-217	ENST00000561090	SLCO1A2	P46721	670 aa		11.98	□□□□□ -0.49
IPO4-217	ENST00000561090	MAGOH	P61326	146 aa	Known RBP	11.98	□□□□□ -0.49
IPO4-217	ENST00000561090	MYO1E	Q12965	1108 aa		11.98	□□□□□ -0.49
IPO4-217	ENST00000561090	CAPS	Q13938	189 aa		11.98	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 42 ms