RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 SP100P23497 879 aaPredicted RBP16.6■□□□□ 0.25
SNRPA1-210ENST00000560383 DSG1Q02413 1049 aa16.6■□□□□ 0.25
SNRPA1-210ENST00000560383 HSP90AA2PQ14568 343 aaPredicted RBP16.6■□□□□ 0.25
SNRPA1-210ENST00000560383 E2F4Q16254 413 aa16.6■□□□□ 0.25
SNRPA1-210ENST00000560383 KIAA0319Q5VV43 1072 aa16.6■□□□□ 0.25
SNRPA1-210ENST00000560383 ELMSAN1Q6PJG2 1045 aa16.6■□□□□ 0.25
SNRPA1-210ENST00000560383 SHC4Q6S5L8 630 aa16.6■□□□□ 0.25
SNRPA1-210ENST00000560383 CYP26C1Q6V0L0 522 aa16.6■□□□□ 0.25
SNRPA1-210ENST00000560383 ZBTB33Q86T24 672 aa16.6■□□□□ 0.25
SNRPA1-210ENST00000560383 C12orf76Q8N812 135 aaPredicted RBP16.6■□□□□ 0.25
SNRPA1-210ENST00000560383 KREMEN2Q8NCW0 462 aa16.6■□□□□ 0.25
SNRPA1-210ENST00000560383 DDX12PQ92771 950 aa16.6■□□□□ 0.25
SNRPA1-210ENST00000560383 PAAF1Q9BRP4 392 aa16.6■□□□□ 0.25
SNRPA1-210ENST00000560383 TCHPQ9BT92 498 aa16.6■□□□□ 0.25
SNRPA1-210ENST00000560383 RXFP1Q9HBX9 757 aa16.6■□□□□ 0.25
SNRPA1-210ENST00000560383 SEL1LQ9UBV2 794 aa16.6■□□□□ 0.25
SNRPA1-210ENST00000560383 RCOR1Q9UKL0 485 aa16.6■□□□□ 0.25
SNRPA1-210ENST00000560383 ADAM28Q9UKQ2 775 aa16.6■□□□□ 0.25
SNRPA1-210ENST00000560383 CFAP45Q9UL16 551 aa16.6■□□□□ 0.25
SNRPA1-210ENST00000560383 ZDHHC9Q9Y397 364 aa16.6■□□□□ 0.25
SNRPA1-210ENST00000560383 MTCL1Q9Y4B5 1905 aaKnown RBP16.6■□□□□ 0.25
SNRPA1-210ENST00000560383 FRMD3A2A2Y4 597 aa16.59■□□□□ 0.25
SNRPA1-210ENST00000560383 K7ENM7 598 aa16.59■□□□□ 0.25
SNRPA1-210ENST00000560383 CLDN3O15551 220 aa16.59■□□□□ 0.25
SNRPA1-210ENST00000560383 MEFVO15553 781 aaPredicted RBP16.59■□□□□ 0.25
SNRPA1-210ENST00000560383 PAPLNO95428 1278 aa16.59■□□□□ 0.25
SNRPA1-210ENST00000560383 KCNE1P15382 129 aa16.59■□□□□ 0.25
SNRPA1-210ENST00000560383 STAT6P42226 847 aa16.59■□□□□ 0.25
SNRPA1-210ENST00000560383 YARSP54577 528 aaKnown RBP16.59■□□□□ 0.25
SNRPA1-210ENST00000560383 NOLC1Q14978 699 aaKnown RBP eCLIP16.59■□□□□ 0.25
SNRPA1-210ENST00000560383 FUT10Q6P4F1 479 aa16.59■□□□□ 0.25
SNRPA1-210ENST00000560383 TMC5Q6UXY8 1006 aa16.59■□□□□ 0.25
SNRPA1-210ENST00000560383 CCDC149Q6ZUS6 474 aa16.59■□□□□ 0.25
SNRPA1-210ENST00000560383 TAS1R1Q7RTX1 841 aa16.59■□□□□ 0.25
SNRPA1-210ENST00000560383 MAP4K3Q8IVH8 894 aa16.59■□□□□ 0.25
SNRPA1-210ENST00000560383 HDAC7Q8WUI4 952 aa16.59■□□□□ 0.25
SNRPA1-210ENST00000560383 ACAP3Q96P50 834 aa16.59■□□□□ 0.25
SNRPA1-210ENST00000560383 STRA6Q9BX79 667 aa16.59■□□□□ 0.25
SNRPA1-210ENST00000560383 PANK2Q9BZ23 570 aa16.59■□□□□ 0.25
SNRPA1-210ENST00000560383 GPR62Q9BZJ7 368 aa16.59■□□□□ 0.25
SNRPA1-210ENST00000560383 HAPLN2Q9GZV7 340 aa16.59■□□□□ 0.25
SNRPA1-210ENST00000560383 CUEDC2Q9H467 287 aa16.59■□□□□ 0.25
SNRPA1-210ENST00000560383 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.59■□□□□ 0.25
SNRPA1-210ENST00000560383 CNTN3Q9P232 1028 aa16.59■□□□□ 0.25
SNRPA1-210ENST00000560383 MYO10Q9HD67 2058 aa16.58■□□□□ 0.25
SNRPA1-210ENST00000560383 USP34Q70CQ2 3546 aa16.58■□□□□ 0.25
SNRPA1-210ENST00000560383 SMIM28A0A1B0GU29 152 aa16.58■□□□□ 0.24
SNRPA1-210ENST00000560383 CASTOR2A6NHX0 329 aa16.58■□□□□ 0.24
SNRPA1-210ENST00000560383 SPDYE4A6NLX3 237 aa16.58■□□□□ 0.24
SNRPA1-210ENST00000560383 TMEM189-UBE2V1I3L0A0 370 aa16.58■□□□□ 0.24
SNRPA1-210ENST00000560383 C2CD2LO14523 706 aa16.58■□□□□ 0.24
SNRPA1-210ENST00000560383 TEX28O15482 410 aa16.58■□□□□ 0.24
SNRPA1-210ENST00000560383 PPP1R37O75864 691 aa16.58■□□□□ 0.24
SNRPA1-210ENST00000560383 WEE2P0C1S8 567 aa16.58■□□□□ 0.24
SNRPA1-210ENST00000560383 GAP43P17677 238 aa16.58■□□□□ 0.24
SNRPA1-210ENST00000560383 NMT1P30419 496 aaKnown RBP16.58■□□□□ 0.24
SNRPA1-210ENST00000560383 CREMQ03060 361 aa16.58■□□□□ 0.24
SNRPA1-210ENST00000560383 DNM1Q05193 864 aaKnown RBP16.58■□□□□ 0.24
SNRPA1-210ENST00000560383 FOXD4L6Q3SYB3 417 aaPredicted RBP16.58■□□□□ 0.24
SNRPA1-210ENST00000560383 FOXD4L3Q6VB84 417 aaPredicted RBP16.58■□□□□ 0.24
SNRPA1-210ENST00000560383 DYMQ7RTS9 669 aa16.58■□□□□ 0.24
SNRPA1-210ENST00000560383 ZNF720Q7Z2F6 126 aa16.58■□□□□ 0.24
SNRPA1-210ENST00000560383 ACSF2Q96CM8 615 aaPredicted RBP16.58■□□□□ 0.24
SNRPA1-210ENST00000560383 HVCN1Q96D96 273 aa16.58■□□□□ 0.24
SNRPA1-210ENST00000560383 SNX27Q96L92 541 aa16.58■□□□□ 0.24
SNRPA1-210ENST00000560383 MAN1C1Q9NR34 630 aa16.58■□□□□ 0.24
SNRPA1-210ENST00000560383 OLFML3Q9NRN5 406 aa16.58■□□□□ 0.24
SNRPA1-210ENST00000560383 KBTBD4Q9NVX7 518 aa16.58■□□□□ 0.24
SNRPA1-210ENST00000560383 FNIP2Q9P278 1114 aa16.58■□□□□ 0.24
SNRPA1-210ENST00000560383 ANKFY1Q9P2R3 1169 aa16.58■□□□□ 0.24
SNRPA1-210ENST00000560383 CACNG4Q9UBN1 327 aa16.58■□□□□ 0.24
SNRPA1-210ENST00000560383 PCDHA7Q9UN72 937 aa16.58■□□□□ 0.24
SNRPA1-210ENST00000560383 MYH15Q9Y2K3 1946 aa16.57■□□□□ 0.24
SNRPA1-210ENST00000560383 SF3B1O75533 1304 aaKnown RBP eCLIP16.57■□□□□ 0.247e-7■■■■■ 63.2
SNRPA1-210ENST00000560383 HNRNPDLO14979 420 aaKnown RBP16.57■□□□□ 0.24
SNRPA1-210ENST00000560383 FAM189A1O60320 539 aa16.57■□□□□ 0.24
SNRPA1-210ENST00000560383 GLUD1P00367 558 aa16.57■□□□□ 0.24
SNRPA1-210ENST00000560383 NUBP1P53384 320 aa16.57■□□□□ 0.24
SNRPA1-210ENST00000560383 PTPN5P54829 565 aa16.57■□□□□ 0.24
SNRPA1-210ENST00000560383 OSTNP61366 133 aa16.57■□□□□ 0.24
SNRPA1-210ENST00000560383 SLC10A6Q3KNW5 377 aa16.57■□□□□ 0.24
SNRPA1-210ENST00000560383 USP41Q3LFD5 358 aa16.57■□□□□ 0.24
SNRPA1-210ENST00000560383 GLRA4Q5JXX5 417 aa16.57■□□□□ 0.24
SNRPA1-210ENST00000560383 KANK3Q6NY19 840 aa16.57■□□□□ 0.24
SNRPA1-210ENST00000560383 OTOP3Q7RTS5 596 aa16.57■□□□□ 0.24
SNRPA1-210ENST00000560383 SFR1Q86XK3 245 aa16.57■□□□□ 0.24
SNRPA1-210ENST00000560383 PDILTQ8N807 584 aa16.57■□□□□ 0.24
SNRPA1-210ENST00000560383 RABGGTAQ92696 567 aa16.57■□□□□ 0.24
SNRPA1-210ENST00000560383 UROC1Q96N76 676 aa16.57■□□□□ 0.24
SNRPA1-210ENST00000560383 ZMAT2Q96NC0 199 aaKnown RBP16.57■□□□□ 0.24
SNRPA1-210ENST00000560383 TNMDQ9H2S6 317 aa16.57■□□□□ 0.24
SNRPA1-210ENST00000560383 ZHX3Q9H4I2 956 aa16.57■□□□□ 0.24
SNRPA1-210ENST00000560383 A0A0B4J269 797 aa16.56■□□□□ 0.24
SNRPA1-210ENST00000560383 TADA2AO75478 443 aa16.56■□□□□ 0.24
SNRPA1-210ENST00000560383 KIF4AO95239 1232 aa16.56■□□□□ 0.24
SNRPA1-210ENST00000560383 CLTAP09496 248 aa16.56■□□□□ 0.24
SNRPA1-210ENST00000560383 LIG4P49917 911 aa16.56■□□□□ 0.24
SNRPA1-210ENST00000560383 SOX4Q06945 474 aaPredicted RBP16.56■□□□□ 0.24
SNRPA1-210ENST00000560383 KYAT1Q16773 422 aa16.56■□□□□ 0.24
SNRPA1-210ENST00000560383 UPP1Q16831 310 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms