RNA–Protein interactions for RNA: ENST00000559941.1

CHRNA3-207, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 592 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-207ENST00000559941 SLC38A7Q9NVC3 462 aa22.4■■□□□ 1.18
CHRNA3-207ENST00000559941 ZDHHC7Q9NXF8 308 aa22.4■■□□□ 1.18
CHRNA3-207ENST00000559941 DOCK6Q96HP0 2047 aa22.4■■□□□ 1.18
CHRNA3-207ENST00000559941 KCNE1P15382 129 aa22.39■■□□□ 1.17
CHRNA3-207ENST00000559941 PLCG1P19174 1290 aa22.39■■□□□ 1.17
CHRNA3-207ENST00000559941 FGFR3P22607 806 aa22.39■■□□□ 1.17
CHRNA3-207ENST00000559941 IGFBP6P24592 240 aaPredicted RBP22.39■■□□□ 1.17
CHRNA3-207ENST00000559941 SOX4Q06945 474 aaPredicted RBP22.39■■□□□ 1.17
CHRNA3-207ENST00000559941 MTMR3Q13615 1198 aa22.39■■□□□ 1.17
CHRNA3-207ENST00000559941 PTPAQ15257 358 aa22.39■■□□□ 1.17
CHRNA3-207ENST00000559941 SMG7Q92540 1137 aaKnown RBP22.39■■□□□ 1.17
CHRNA3-207ENST00000559941 DDX27Q96GQ7 796 aaKnown RBP22.39■■□□□ 1.17
CHRNA3-207ENST00000559941 ZMAT2Q96NC0 199 aaKnown RBP22.39■■□□□ 1.17
CHRNA3-207ENST00000559941 CCSER1Q9C0I3 900 aa22.39■■□□□ 1.17
CHRNA3-207ENST00000559941 CNTN3Q9P232 1028 aa22.39■■□□□ 1.17
CHRNA3-207ENST00000559941 CLIC4Q9Y696 253 aa22.39■■□□□ 1.17
CHRNA3-207ENST00000559941 ASGR2P07307 311 aa22.38■■□□□ 1.17
CHRNA3-207ENST00000559941 HARSP12081 509 aaKnown RBP22.38■■□□□ 1.17
CHRNA3-207ENST00000559941 ZNF131P52739 623 aa22.38■■□□□ 1.17
CHRNA3-207ENST00000559941 RESTQ13127 1097 aa22.38■■□□□ 1.17
CHRNA3-207ENST00000559941 DHX8Q14562 1220 aaKnown RBP22.38■■□□□ 1.17
CHRNA3-207ENST00000559941 MCM6Q14566 821 aa22.38■■□□□ 1.17
CHRNA3-207ENST00000559941 NOLC1Q14978 699 aaKnown RBP eCLIP22.38■■□□□ 1.17
CHRNA3-207ENST00000559941 HAUS6Q7Z4H7 955 aa22.38■■□□□ 1.17
CHRNA3-207ENST00000559941 FBXL6Q8N531 539 aa22.38■■□□□ 1.17
CHRNA3-207ENST00000559941 C3orf58Q8NDZ4 430 aa22.38■■□□□ 1.17
CHRNA3-207ENST00000559941 RAD54LQ92698 747 aa22.38■■□□□ 1.17
CHRNA3-207ENST00000559941 PRKD2Q9BZL6 878 aa22.38■■□□□ 1.17
CHRNA3-207ENST00000559941 FBXW11Q9UKB1 542 aa22.38■■□□□ 1.17
CHRNA3-207ENST00000559941 KMT2EQ8IZD2 1858 aa22.38■■□□□ 1.17
CHRNA3-207ENST00000559941 CLUHO75153 1309 aa22.37■■□□□ 1.17
CHRNA3-207ENST00000559941 CLDN3O15551 220 aa22.37■■□□□ 1.17
CHRNA3-207ENST00000559941 MEFVO15553 781 aaPredicted RBP22.37■■□□□ 1.17
CHRNA3-207ENST00000559941 TRAPPC3O43617 180 aa22.37■■□□□ 1.17
CHRNA3-207ENST00000559941 ZMYND10O75800 440 aa22.37■■□□□ 1.17
CHRNA3-207ENST00000559941 SCP2P22307 547 aa22.37■■□□□ 1.17
CHRNA3-207ENST00000559941 MCL1Q07820 350 aa22.37■■□□□ 1.17
CHRNA3-207ENST00000559941 SUGP1Q8IWZ8 645 aaKnown RBP22.37■■□□□ 1.17
CHRNA3-207ENST00000559941 RASSF8Q8NHQ8 419 aa22.37■■□□□ 1.17
CHRNA3-207ENST00000559941 STAMQ92783 540 aa22.37■■□□□ 1.17
CHRNA3-207ENST00000559941 ANKFY1Q9P2R3 1169 aa22.37■■□□□ 1.17
CHRNA3-207ENST00000559941 MTRRQ9UBK8 725 aa22.37■■□□□ 1.17
CHRNA3-207ENST00000559941 ADAM12O43184 909 aa22.36■■□□□ 1.17
CHRNA3-207ENST00000559941 FAM13AO94988 1023 aa22.36■■□□□ 1.17
CHRNA3-207ENST00000559941 BRCC3P46736 316 aa22.36■■□□□ 1.17
CHRNA3-207ENST00000559941 SLC10A6Q3KNW5 377 aa22.36■■□□□ 1.17
CHRNA3-207ENST00000559941 MYCT1Q8N699 235 aa22.36■■□□□ 1.17
CHRNA3-207ENST00000559941 LARP4BQ92615 738 aaKnown RBP22.36■■□□□ 1.17
CHRNA3-207ENST00000559941 PIDD1Q9HB75 910 aa22.36■■□□□ 1.17
CHRNA3-207ENST00000559941 PARVGQ9HBI0 331 aa22.36■■□□□ 1.17
CHRNA3-207ENST00000559941 FBXO2Q9UK22 296 aaPredicted RBP22.36■■□□□ 1.17
CHRNA3-207ENST00000559941 SRPRBQ9Y5M8 271 aaKnown RBP22.36■■□□□ 1.17
CHRNA3-207ENST00000559941 K7ELQ4 463 aaPredicted RBP22.35■■□□□ 1.17
CHRNA3-207ENST00000559941 PODXLO00592 558 aa22.35■■□□□ 1.17
CHRNA3-207ENST00000559941 N4BP1O75113 896 aaKnown RBP22.35■■□□□ 1.17
CHRNA3-207ENST00000559941 MARCKSP29966 332 aaPredicted RBP22.35■■□□□ 1.17
CHRNA3-207ENST00000559941 RPL9P32969 192 aaKnown RBP22.35■■□□□ 1.17
CHRNA3-207ENST00000559941 DDIT3P35638 169 aa22.35■■□□□ 1.17
CHRNA3-207ENST00000559941 RAB33AQ14088 237 aa22.35■■□□□ 1.17
CHRNA3-207ENST00000559941 SEZ6Q53EL9 994 aa22.35■■□□□ 1.17
CHRNA3-207ENST00000559941 FAM173BQ6P4H8 233 aa22.35■■□□□ 1.17
CHRNA3-207ENST00000559941 USP49Q70CQ1 688 aa22.35■■□□□ 1.17
CHRNA3-207ENST00000559941 BICD1Q96G01 975 aa22.35■■□□□ 1.17
CHRNA3-207ENST00000559941 EPSTI1Q96J88 318 aa22.35■■□□□ 1.17
CHRNA3-207ENST00000559941 HAPLN2Q9GZV7 340 aa22.35■■□□□ 1.17
CHRNA3-207ENST00000559941 SMOC2Q9H3U7 446 aa22.35■■□□□ 1.17
CHRNA3-207ENST00000559941 BACE2Q9Y5Z0 518 aa22.35■■□□□ 1.17
CHRNA3-207ENST00000559941 TRAK2O60296 914 aa22.34■■□□□ 1.17
CHRNA3-207ENST00000559941 PIGRP01833 764 aa22.34■■□□□ 1.17
CHRNA3-207ENST00000559941 KRT18P05783 430 aaKnown RBP22.34■■□□□ 1.17
CHRNA3-207ENST00000559941 TKTP29401 623 aaKnown RBP22.34■■□□□ 1.17
CHRNA3-207ENST00000559941 OR1D2P34982 312 aa22.34■■□□□ 1.17
CHRNA3-207ENST00000559941 LIN9Q5TKA1 542 aa22.34■■□□□ 1.17
CHRNA3-207ENST00000559941 RSPO2Q6UXX9 243 aaPredicted RBP22.34■■□□□ 1.17
CHRNA3-207ENST00000559941 C18orf25Q96B23 403 aaPredicted RBP22.34■■□□□ 1.17
CHRNA3-207ENST00000559941 PLEKHA5Q9HAU0 1116 aa22.34■■□□□ 1.17
CHRNA3-207ENST00000559941 TBX20Q9UMR3 447 aa22.34■■□□□ 1.17
CHRNA3-207ENST00000559941 MTMR6Q9Y217 621 aa22.34■■□□□ 1.17
CHRNA3-207ENST00000559941 WDFY4Q6ZS81 3184 aa22.34■■□□□ 1.17
CHRNA3-207ENST00000559941 I3L4J1 428 aa22.33■■□□□ 1.17
CHRNA3-207ENST00000559941 K7ENM7 598 aa22.33■■□□□ 1.17
CHRNA3-207ENST00000559941 CLTAP09496 248 aa22.33■■□□□ 1.17
CHRNA3-207ENST00000559941 HNRNPA1P09651 372 aaKnown RBP eCLIP22.33■■□□□ 1.17
CHRNA3-207ENST00000559941 HOXA9P31269 272 aa22.33■■□□□ 1.17
CHRNA3-207ENST00000559941 GBP2P32456 591 aaPredicted RBP22.33■■□□□ 1.17
CHRNA3-207ENST00000559941 MATR3P43243 847 aaKnown RBP eCLIP22.33■■□□□ 1.17
CHRNA3-207ENST00000559941 LIG4P49917 911 aa22.33■■□□□ 1.17
CHRNA3-207ENST00000559941 SPECC1Q5M775 1068 aa22.33■■□□□ 1.17
CHRNA3-207ENST00000559941 ANKS3Q6ZW76 656 aa22.33■■□□□ 1.17
CHRNA3-207ENST00000559941 MYADMQ96S97 322 aa22.33■■□□□ 1.17
CHRNA3-207ENST00000559941 FIZ1Q96SL8 496 aa22.33■■□□□ 1.17
CHRNA3-207ENST00000559941 KCNK12Q9HB15 430 aa22.33■■□□□ 1.17
CHRNA3-207ENST00000559941 FOXD4L1Q9NU39 408 aa22.33■■□□□ 1.17
CHRNA3-207ENST00000559941 IGSF9Q9P2J2 1179 aa22.33■■□□□ 1.17
CHRNA3-207ENST00000559941 CCDC39Q9UFE4 941 aa22.33■■□□□ 1.17
CHRNA3-207ENST00000559941 MORC2Q9Y6X9 1032 aaPredicted RBP22.33■■□□□ 1.17
CHRNA3-207ENST00000559941 MYH15Q9Y2K3 1946 aa22.33■■□□□ 1.16
CHRNA3-207ENST00000559941 TBCAO75347 108 aaKnown RBP22.32■■□□□ 1.16
CHRNA3-207ENST00000559941 C8AP07357 584 aa22.32■■□□□ 1.16
CHRNA3-207ENST00000559941 ABCD1P33897 745 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms