RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 ASIC4Q96FT7 647 aa13.79□□□□□ -0.2
SNX6-207ENST00000556303 SNX27Q96L92 541 aa13.79□□□□□ -0.2
SNX6-207ENST00000556303 CLSTN3Q9BQT9 956 aa13.79□□□□□ -0.2
SNX6-207ENST00000556303 PRKD2Q9BZL6 878 aa13.79□□□□□ -0.2
SNX6-207ENST00000556303 CXCL16Q9H2A7 254 aa13.79□□□□□ -0.2
SNX6-207ENST00000556303 BLOC1S4Q9NUP1 217 aa13.79□□□□□ -0.2
SNX6-207ENST00000556303 CCDC39Q9UFE4 941 aa13.79□□□□□ -0.2
SNX6-207ENST00000556303 BACE2Q9Y5Z0 518 aa13.79□□□□□ -0.2
SNX6-207ENST00000556303 CITO14578 2027 aa13.79□□□□□ -0.2
SNX6-207ENST00000556303 K7ELQ4 463 aaPredicted RBP13.78□□□□□ -0.2
SNX6-207ENST00000556303 ZMYND10O75800 440 aa13.78□□□□□ -0.2
SNX6-207ENST00000556303 PIGRP01833 764 aa13.78□□□□□ -0.2
SNX6-207ENST00000556303 HNRNPA1P09651 372 aaKnown RBP eCLIP13.78□□□□□ -0.2
SNX6-207ENST00000556303 WEE2P0C1S8 567 aa13.78□□□□□ -0.2
SNX6-207ENST00000556303 PLCG1P19174 1290 aa13.78□□□□□ -0.2
SNX6-207ENST00000556303 NUBP1P53384 320 aa13.78□□□□□ -0.2
SNX6-207ENST00000556303 RAD51AP2Q09MP3 1159 aa13.78□□□□□ -0.2
SNX6-207ENST00000556303 RAB33AQ14088 237 aa13.78□□□□□ -0.2
SNX6-207ENST00000556303 KANK3Q6NY19 840 aa13.78□□□□□ -0.2
SNX6-207ENST00000556303 HAUS6Q7Z4H7 955 aa13.78□□□□□ -0.2
SNX6-207ENST00000556303 GPBP1Q86WP2 473 aa13.78□□□□□ -0.2
SNX6-207ENST00000556303 CEP57Q86XR8 500 aa13.78□□□□□ -0.2
SNX6-207ENST00000556303 PALB2Q86YC2 1186 aa13.78□□□□□ -0.2
SNX6-207ENST00000556303 SUGP1Q8IWZ8 645 aaKnown RBP13.78□□□□□ -0.2
SNX6-207ENST00000556303 CEP120Q8N960 986 aa13.78□□□□□ -0.2
SNX6-207ENST00000556303 HASPINQ8TF76 798 aa13.78□□□□□ -0.2
SNX6-207ENST00000556303 LARP4BQ92615 738 aaKnown RBP13.78□□□□□ -0.2
SNX6-207ENST00000556303 RABGGTAQ92696 567 aa13.78□□□□□ -0.2
SNX6-207ENST00000556303 SNX21Q969T3 373 aa13.78□□□□□ -0.2
SNX6-207ENST00000556303 B3GALT6Q96L58 329 aa13.78□□□□□ -0.2
SNX6-207ENST00000556303 REEP2Q9BRK0 252 aa13.78□□□□□ -0.2
SNX6-207ENST00000556303 ST6GALNAC4Q9H4F1 302 aa13.78□□□□□ -0.2
SNX6-207ENST00000556303 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.78□□□□□ -0.2
SNX6-207ENST00000556303 IGSF9Q9P2J2 1179 aa13.78□□□□□ -0.2
SNX6-207ENST00000556303 STK17AQ9UEE5 414 aa13.78□□□□□ -0.2
SNX6-207ENST00000556303 LIMD1Q9UGP4 676 aa13.78□□□□□ -0.2
SNX6-207ENST00000556303 CDH22Q9UJ99 828 aa13.78□□□□□ -0.2
SNX6-207ENST00000556303 FBXW11Q9UKB1 542 aa13.78□□□□□ -0.2
SNX6-207ENST00000556303 ZFP37Q9Y6Q3 630 aaPredicted RBP13.78□□□□□ -0.2
SNX6-207ENST00000556303 SYN3O14994 580 aa13.77□□□□□ -0.21
SNX6-207ENST00000556303 TRAK2O60296 914 aa13.77□□□□□ -0.21
SNX6-207ENST00000556303 FAM13AO94988 1023 aa13.77□□□□□ -0.21
SNX6-207ENST00000556303 CLTAP09496 248 aa13.77□□□□□ -0.21
SNX6-207ENST00000556303 SP100P23497 879 aaPredicted RBP13.77□□□□□ -0.21
SNX6-207ENST00000556303 TXLNAP40222 546 aa13.77□□□□□ -0.21
SNX6-207ENST00000556303 GTF2BQ00403 316 aa13.77□□□□□ -0.21
SNX6-207ENST00000556303 POU5F1Q01860 360 aaKnown RBP13.77□□□□□ -0.21
SNX6-207ENST00000556303 RESTQ13127 1097 aa13.77□□□□□ -0.21
SNX6-207ENST00000556303 MCM6Q14566 821 aa13.77□□□□□ -0.21
SNX6-207ENST00000556303 KARSQ15046 597 aaKnown RBP13.77□□□□□ -0.21
SNX6-207ENST00000556303 GLRA4Q5JXX5 417 aa13.77□□□□□ -0.21
SNX6-207ENST00000556303 CD300LGQ6UXG3 332 aa13.77□□□□□ -0.21
SNX6-207ENST00000556303 CD302Q8IX05 232 aa13.77□□□□□ -0.21
SNX6-207ENST00000556303 FBXL6Q8N531 539 aa13.77□□□□□ -0.21
SNX6-207ENST00000556303 MYCT1Q8N699 235 aa13.77□□□□□ -0.21
SNX6-207ENST00000556303 SMG7Q92540 1137 aaKnown RBP13.77□□□□□ -0.21
SNX6-207ENST00000556303 ZNF707Q96C28 371 aaPredicted RBP13.77□□□□□ -0.21
SNX6-207ENST00000556303 BICD1Q96G01 975 aa13.77□□□□□ -0.21
SNX6-207ENST00000556303 ZBTB45Q96K62 511 aaPredicted RBP13.77□□□□□ -0.21
SNX6-207ENST00000556303 ZMAT2Q96NC0 199 aaKnown RBP13.77□□□□□ -0.21
SNX6-207ENST00000556303 EPS15L1Q9UBC2 864 aa13.77□□□□□ -0.21
SNX6-207ENST00000556303 MTRRQ9UBK8 725 aa13.77□□□□□ -0.21
SNX6-207ENST00000556303 CACNG4Q9UBN1 327 aa13.77□□□□□ -0.21
SNX6-207ENST00000556303 TBX20Q9UMR3 447 aa13.77□□□□□ -0.21
SNX6-207ENST00000556303 CLIC4Q9Y696 253 aa13.77□□□□□ -0.21
SNX6-207ENST00000556303 DENND4AQ7Z401 1863 aa13.76□□□□□ -0.21
SNX6-207ENST00000556303 CLUHO75153 1309 aa13.76□□□□□ -0.21
SNX6-207ENST00000556303 NPHP3-ACAD11A0A0J9YXS1 232 aa13.76□□□□□ -0.21
SNX6-207ENST00000556303 PODXLO00592 558 aa13.76□□□□□ -0.21
SNX6-207ENST00000556303 XPOTO43592 962 aaKnown RBP13.76□□□□□ -0.21
SNX6-207ENST00000556303 STX6O43752 255 aa13.76□□□□□ -0.21
SNX6-207ENST00000556303 TBCAO75347 108 aaKnown RBP13.76□□□□□ -0.21
SNX6-207ENST00000556303 RFPL2O75678 378 aa13.76□□□□□ -0.21
SNX6-207ENST00000556303 KRT18P05783 430 aaKnown RBP13.76□□□□□ -0.21
SNX6-207ENST00000556303 RPL17P18621 184 aaKnown RBP13.76□□□□□ -0.21
SNX6-207ENST00000556303 CYP3A5P20815 502 aa13.76□□□□□ -0.21
SNX6-207ENST00000556303 PAX3P23760 479 aa13.76□□□□□ -0.21
SNX6-207ENST00000556303 OSTNP61366 133 aa13.76□□□□□ -0.21
SNX6-207ENST00000556303 GRIN1Q05586 938 aa13.76□□□□□ -0.21
SNX6-207ENST00000556303 SLC10A6Q3KNW5 377 aa13.76□□□□□ -0.21
SNX6-207ENST00000556303 LIN9Q5TKA1 542 aa13.76□□□□□ -0.21
SNX6-207ENST00000556303 PRSS55Q6UWB4 352 aaPredicted RBP13.76□□□□□ -0.21
SNX6-207ENST00000556303 KRI1Q8N9T8 703 aaKnown RBP13.76□□□□□ -0.21
SNX6-207ENST00000556303 PIDD1Q9HB75 910 aa13.76□□□□□ -0.21
SNX6-207ENST00000556303 ANKFY1Q9P2R3 1169 aa13.76□□□□□ -0.21
SNX6-207ENST00000556303 SEL1LQ9UBV2 794 aa13.76□□□□□ -0.21
SNX6-207ENST00000556303 FBXO2Q9UK22 296 aaPredicted RBP13.76□□□□□ -0.21
SNX6-207ENST00000556303 MAFFQ9ULX9 164 aa13.76□□□□□ -0.21
SNX6-207ENST00000556303 MTMR6Q9Y217 621 aa13.76□□□□□ -0.21
SNX6-207ENST00000556303 C2orf16Q68DN1 1984 aa13.76□□□□□ -0.21
SNX6-207ENST00000556303 PLXNA3P51805 1871 aa13.76□□□□□ -0.21
SNX6-207ENST00000556303 VWA8A3KMH1 1905 aa13.75□□□□□ -0.21
SNX6-207ENST00000556303 H7C4K7 107 aa13.75□□□□□ -0.21
SNX6-207ENST00000556303 K7ENM7 598 aa13.75□□□□□ -0.21
SNX6-207ENST00000556303 HNRNPDLO14979 420 aaKnown RBP13.75□□□□□ -0.21
SNX6-207ENST00000556303 XYLBO75191 536 aa13.75□□□□□ -0.21
SNX6-207ENST00000556303 ADRB2P07550 413 aa13.75□□□□□ -0.21
SNX6-207ENST00000556303 SPATA31D3P0C874 917 aa13.75□□□□□ -0.21
SNX6-207ENST00000556303 LRPAP1P30533 357 aa13.75□□□□□ -0.21
SNX6-207ENST00000556303 MATR3P43243 847 aaKnown RBP eCLIP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms