RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 CCZ1BP86790 482 aa7.47□□□□□ -1.21
SLIRP-204ENST00000555890 CCZ1P86791 482 aaPredicted RBP7.47□□□□□ -1.21
SLIRP-204ENST00000555890 ZNF200P98182 395 aaPredicted RBP7.47□□□□□ -1.21
SLIRP-204ENST00000555890 UBXN1Q04323 297 aa7.47□□□□□ -1.21
SLIRP-204ENST00000555890 FAAP100Q0VG06 881 aa7.47□□□□□ -1.21
SLIRP-204ENST00000555890 SMAD2Q15796 467 aaKnown RBP7.47□□□□□ -1.21
SLIRP-204ENST00000555890 GNPTABQ3T906 1256 aa7.47□□□□□ -1.21
SLIRP-204ENST00000555890 ARSHQ5FYA8 562 aa7.47□□□□□ -1.21
SLIRP-204ENST00000555890 FKBP15Q5T1M5 1219 aa7.47□□□□□ -1.21
SLIRP-204ENST00000555890 B3GNT9Q6UX72 402 aa7.47□□□□□ -1.21
SLIRP-204ENST00000555890 LBX2Q6XYB7 198 aa7.47□□□□□ -1.21
SLIRP-204ENST00000555890 STXBP4Q6ZWJ1 553 aa7.47□□□□□ -1.21
SLIRP-204ENST00000555890 APTXQ7Z2E3 356 aaKnown RBP7.47□□□□□ -1.21
SLIRP-204ENST00000555890 RIOX2Q8IUF8 465 aa7.47□□□□□ -1.21
SLIRP-204ENST00000555890 ETFBKMTQ8IXQ9 262 aa7.47□□□□□ -1.21
SLIRP-204ENST00000555890 ANKRD35Q8N283 1001 aa7.47□□□□□ -1.21
SLIRP-204ENST00000555890 ARRDC4Q8NCT1 418 aa7.47□□□□□ -1.21
SLIRP-204ENST00000555890 DNERQ8NFT8 737 aa7.47□□□□□ -1.21
SLIRP-204ENST00000555890 RDM1Q8NG50 284 aa7.47□□□□□ -1.21
SLIRP-204ENST00000555890 IL31RAQ8NI17 732 aa7.47□□□□□ -1.21
SLIRP-204ENST00000555890 HPS3Q969F9 1004 aa7.47□□□□□ -1.21
SLIRP-204ENST00000555890 CCDC51Q96ER9 411 aa7.47□□□□□ -1.21
SLIRP-204ENST00000555890 CCDC43Q96MW1 224 aaKnown RBP7.47□□□□□ -1.21
SLIRP-204ENST00000555890 MPHOSPH6Q99547 160 aaKnown RBP7.47□□□□□ -1.21
SLIRP-204ENST00000555890 ZSWIM4Q9H7M6 989 aa7.47□□□□□ -1.21
SLIRP-204ENST00000555890 INTS13Q9NVM9 706 aa7.47□□□□□ -1.21
SLIRP-204ENST00000555890 TAB2Q9NYJ8 693 aa7.47□□□□□ -1.21
SLIRP-204ENST00000555890 CYP39A1Q9NYL5 469 aa7.47□□□□□ -1.21
SLIRP-204ENST00000555890 PKD2L1Q9P0L9 805 aa7.47□□□□□ -1.21
SLIRP-204ENST00000555890 SEL1LQ9UBV2 794 aa7.47□□□□□ -1.21
SLIRP-204ENST00000555890 ZNF232Q9UNY5 417 aa7.47□□□□□ -1.21
SLIRP-204ENST00000555890 PHF24Q9UPV7 400 aa7.47□□□□□ -1.21
SLIRP-204ENST00000555890 SAMM50Q9Y512 469 aa7.47□□□□□ -1.21
SLIRP-204ENST00000555890 USP3Q9Y6I4 520 aa7.47□□□□□ -1.21
SLIRP-204ENST00000555890 CREBBPQ92793 2442 aa7.47□□□□□ -1.21
SLIRP-204ENST00000555890 NPHP3-ACAD11A0A0J9YXS1 232 aa7.46□□□□□ -1.22
SLIRP-204ENST00000555890 LGALS16A8MUM7 142 aa7.46□□□□□ -1.22
SLIRP-204ENST00000555890 WDR64B1ANS9 1081 aa7.46□□□□□ -1.22
SLIRP-204ENST00000555890 KBTBD13C9JR72 458 aa7.46□□□□□ -1.22
SLIRP-204ENST00000555890 RNF223E7ERA6 249 aa7.46□□□□□ -1.22
SLIRP-204ENST00000555890 DDX39AO00148 427 aaKnown RBP7.46□□□□□ -1.22
SLIRP-204ENST00000555890 PES1O00541 588 aaKnown RBP7.46□□□□□ -1.22
SLIRP-204ENST00000555890 DHX15O43143 795 aaKnown RBP7.46□□□□□ -1.22
SLIRP-204ENST00000555890 TEX33O43247 280 aa7.46□□□□□ -1.22
SLIRP-204ENST00000555890 CALUO43852 315 aaPredicted RBP7.46□□□□□ -1.22
SLIRP-204ENST00000555890 STX10O60499 249 aa7.46□□□□□ -1.22
SLIRP-204ENST00000555890 LYPLA2O95372 231 aa7.46□□□□□ -1.22
SLIRP-204ENST00000555890 SLC25A27O95847 323 aa7.46□□□□□ -1.22
SLIRP-204ENST00000555890 TUBB4AP04350 444 aa7.46□□□□□ -1.22
SLIRP-204ENST00000555890 RPLP1P05386 114 aaKnown RBP7.46□□□□□ -1.22
SLIRP-204ENST00000555890 ACRP10323 421 aa7.46□□□□□ -1.22
SLIRP-204ENST00000555890 RPL13P26373 211 aaKnown RBP7.46□□□□□ -1.22
SLIRP-204ENST00000555890 CNGA1P29973 690 aa7.46□□□□□ -1.22
SLIRP-204ENST00000555890 NOS2P35228 1153 aa7.46□□□□□ -1.22
SLIRP-204ENST00000555890 GGCXP38435 758 aa7.46□□□□□ -1.22
SLIRP-204ENST00000555890 PBX1P40424 430 aa7.46□□□□□ -1.22
SLIRP-204ENST00000555890 QARSP47897 775 aaKnown RBP7.46□□□□□ -1.22
SLIRP-204ENST00000555890 FKBP3Q00688 224 aaKnown RBP7.46□□□□□ -1.22
SLIRP-204ENST00000555890 TBC1D8BQ0IIM8 1120 aa7.46□□□□□ -1.22
SLIRP-204ENST00000555890 ITGB3BPQ13352 177 aaPredicted RBP7.46□□□□□ -1.22
SLIRP-204ENST00000555890 STXBP2Q15833 593 aa7.46□□□□□ -1.22
SLIRP-204ENST00000555890 N4BP2L1Q5TBK1 243 aaPredicted RBP7.46□□□□□ -1.22
SLIRP-204ENST00000555890 MFSD14CQ5VZR4 134 aa7.46□□□□□ -1.22
SLIRP-204ENST00000555890 ZNF746Q6NUN9 644 aaPredicted RBP7.46□□□□□ -1.22
SLIRP-204ENST00000555890 RINT1Q6NUQ1 792 aa7.46□□□□□ -1.22
SLIRP-204ENST00000555890 C1orf186Q6ZWK4 172 aa7.46□□□□□ -1.22
SLIRP-204ENST00000555890 IRF2BP1Q8IU81 584 aa7.46□□□□□ -1.22
SLIRP-204ENST00000555890 CNGA4Q8IV77 575 aa7.46□□□□□ -1.22
SLIRP-204ENST00000555890 C17orf53Q8N3J3 647 aaPredicted RBP7.46□□□□□ -1.22
SLIRP-204ENST00000555890 PIGOQ8TEQ8 1089 aa7.46□□□□□ -1.22
SLIRP-204ENST00000555890 IQCDQ96DY2 449 aa7.46□□□□□ -1.22
SLIRP-204ENST00000555890 IFT43Q96FT9 208 aa7.46□□□□□ -1.22
SLIRP-204ENST00000555890 CNOT6LQ96LI5 555 aaKnown RBP7.46□□□□□ -1.22
SLIRP-204ENST00000555890 CEP63Q96MT8 703 aa7.46□□□□□ -1.22
SLIRP-204ENST00000555890 PANX2Q96RD6 677 aa7.46□□□□□ -1.22
SLIRP-204ENST00000555890 BAG1Q99933 345 aaPredicted RBP7.46□□□□□ -1.22
SLIRP-204ENST00000555890 SENP7Q9BQF6 1050 aa7.46□□□□□ -1.22
SLIRP-204ENST00000555890 REEP2Q9BRK0 252 aa7.46□□□□□ -1.22
SLIRP-204ENST00000555890 LXNQ9BS40 222 aa7.46□□□□□ -1.22
SLIRP-204ENST00000555890 TUBGCP2Q9BSJ2 902 aa7.46□□□□□ -1.22
SLIRP-204ENST00000555890 NOC4LQ9BVI4 516 aaKnown RBP7.46□□□□□ -1.22
SLIRP-204ENST00000555890 NUP58Q9BVL2 599 aa7.46□□□□□ -1.22
SLIRP-204ENST00000555890 NAA15Q9BXJ9 866 aaKnown RBP7.46□□□□□ -1.22
SLIRP-204ENST00000555890 A1CFQ9NQ94 594 aaKnown RBP7.46□□□□□ -1.22
SLIRP-204ENST00000555890 KCND1Q9NSA2 647 aa7.46□□□□□ -1.22
SLIRP-204ENST00000555890 TBC1D7Q9P0N9 293 aa7.46□□□□□ -1.22
SLIRP-204ENST00000555890 DBR1Q9UK59 544 aaKnown RBP7.46□□□□□ -1.22
SLIRP-204ENST00000555890 ODF2LQ9ULJ1 636 aa7.46□□□□□ -1.22
SLIRP-204ENST00000555890 PCDHA2Q9Y5H9 948 aa7.46□□□□□ -1.22
SLIRP-204ENST00000555890 NFASCO94856 1347 aa7.46□□□□□ -1.22
SLIRP-204ENST00000555890 MYH9P35579 1960 aaKnown RBP7.46□□□□□ -1.22
SLIRP-204ENST00000555890 ZNFX1Q9P2E3 1918 aaKnown RBP7.45□□□□□ -1.22
SLIRP-204ENST00000555890 SLC15A5A6NIM6 579 aa7.45□□□□□ -1.22
SLIRP-204ENST00000555890 DCDC2CA8MYV0 355 aa7.45□□□□□ -1.22
SLIRP-204ENST00000555890 SPATA31C2B4DYI2 1134 aa7.45□□□□□ -1.22
SLIRP-204ENST00000555890 KIF2AO00139 706 aaPredicted RBP7.45□□□□□ -1.22
SLIRP-204ENST00000555890 CETN3O15182 167 aa7.45□□□□□ -1.22
SLIRP-204ENST00000555890 ZSCAN12O43309 604 aa7.45□□□□□ -1.22
SLIRP-204ENST00000555890 EIF3JO75822 258 aaKnown RBP7.45□□□□□ -1.22
SLIRP-204ENST00000555890 FGBP02675 491 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms