RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 SFNP31947 248 aa10.18□□□□□ -0.78
PRKCH-218ENST00000555628 GRM5P41594 1212 aa10.18□□□□□ -0.78
PRKCH-218ENST00000555628 JAK3P52333 1124 aa10.18□□□□□ -0.78
PRKCH-218ENST00000555628 NECTIN1Q15223 517 aa10.18□□□□□ -0.78
PRKCH-218ENST00000555628 RTN1Q16799 776 aa10.18□□□□□ -0.78
PRKCH-218ENST00000555628 MTERF2Q49AM1 385 aa10.18□□□□□ -0.78
PRKCH-218ENST00000555628 RTP2Q5QGT7 225 aa10.18□□□□□ -0.78
PRKCH-218ENST00000555628 ZBTB41Q5SVQ8 909 aa10.18□□□□□ -0.78
PRKCH-218ENST00000555628 DIEXFQ68CQ4 756 aaKnown RBP10.18□□□□□ -0.78
PRKCH-218ENST00000555628 FUT10Q6P4F1 479 aa10.18□□□□□ -0.78
PRKCH-218ENST00000555628 ELMSAN1Q6PJG2 1045 aa10.18□□□□□ -0.78
PRKCH-218ENST00000555628 MTSS1LQ765P7 747 aa10.18□□□□□ -0.78
PRKCH-218ENST00000555628 RHPN2Q8IUC4 686 aa10.18□□□□□ -0.78
PRKCH-218ENST00000555628 NPAS3Q8IXF0 933 aa10.18□□□□□ -0.78
PRKCH-218ENST00000555628 REXO1Q8N1G1 1221 aaKnown RBP10.18□□□□□ -0.78
PRKCH-218ENST00000555628 RDM1Q8NG50 284 aa10.18□□□□□ -0.78
PRKCH-218ENST00000555628 PHKBQ93100 1093 aa10.18□□□□□ -0.78
PRKCH-218ENST00000555628 NLRP4Q96MN2 994 aa10.18□□□□□ -0.78
PRKCH-218ENST00000555628 CDK15Q96Q40 435 aa10.18□□□□□ -0.78
PRKCH-218ENST00000555628 KXD1Q9BQD3 176 aa10.18□□□□□ -0.78
PRKCH-218ENST00000555628 EIF2AQ9BY44 585 aaKnown RBP10.18□□□□□ -0.78
PRKCH-218ENST00000555628 INO80BQ9C086 356 aaPredicted RBP10.18□□□□□ -0.78
PRKCH-218ENST00000555628 CHRDQ9H2X0 955 aa10.18□□□□□ -0.78
PRKCH-218ENST00000555628 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.18□□□□□ -0.78
PRKCH-218ENST00000555628 USP18Q9UMW8 372 aa10.18□□□□□ -0.78
PRKCH-218ENST00000555628 IPPQ9Y573 584 aa10.18□□□□□ -0.78
PRKCH-218ENST00000555628 ZMYM2Q9UBW7 1377 aa10.17□□□□□ -0.78
PRKCH-218ENST00000555628 ADAM12O43184 909 aa10.17□□□□□ -0.78
PRKCH-218ENST00000555628 HNRNPA1P09651 372 aaKnown RBP eCLIP10.17□□□□□ -0.78
PRKCH-218ENST00000555628 FCARP24071 287 aa10.17□□□□□ -0.78
PRKCH-218ENST00000555628 MLH1P40692 756 aa10.17□□□□□ -0.78
PRKCH-218ENST00000555628 OR1G1P47890 313 aa10.17□□□□□ -0.78
PRKCH-218ENST00000555628 SCNN1GP51170 649 aa10.17□□□□□ -0.78
PRKCH-218ENST00000555628 RCAN1P53805 252 aa10.17□□□□□ -0.78
PRKCH-218ENST00000555628 EXOSC10Q01780 885 aaKnown RBP10.17□□□□□ -0.78
PRKCH-218ENST00000555628 SPEM2Q0P670 501 aa10.17□□□□□ -0.78
PRKCH-218ENST00000555628 COL9A2Q14055 689 aaPredicted RBP10.17□□□□□ -0.78
PRKCH-218ENST00000555628 CREB3L3Q68CJ9 461 aa10.17□□□□□ -0.78
PRKCH-218ENST00000555628 LAIR1Q6GTX8 287 aa10.17□□□□□ -0.78
PRKCH-218ENST00000555628 TPRG1Q6ZUI0 275 aa10.17□□□□□ -0.78
PRKCH-218ENST00000555628 ETNPPLQ8TBG4 499 aa10.17□□□□□ -0.78
PRKCH-218ENST00000555628 SECISBP2LQ93073 1101 aaKnown RBP10.17□□□□□ -0.78
PRKCH-218ENST00000555628 GAD1Q99259 594 aa10.17□□□□□ -0.78
PRKCH-218ENST00000555628 CLSTN3Q9BQT9 956 aa10.17□□□□□ -0.78
PRKCH-218ENST00000555628 PLA2G2FQ9BZM2 168 aa10.17□□□□□ -0.78
PRKCH-218ENST00000555628 DHX33Q9H6R0 707 aaKnown RBP10.17□□□□□ -0.78
PRKCH-218ENST00000555628 PIDD1Q9HB75 910 aa10.17□□□□□ -0.78
PRKCH-218ENST00000555628 WRAP73Q9P2S5 460 aaPredicted RBP10.17□□□□□ -0.78
PRKCH-218ENST00000555628 SAMM50Q9Y512 469 aa10.17□□□□□ -0.78
PRKCH-218ENST00000555628 COL4A3BPQ9Y5P4 624 aa10.17□□□□□ -0.78
PRKCH-218ENST00000555628 RALGAPA1Q6GYQ0 2036 aa10.16□□□□□ -0.78
PRKCH-218ENST00000555628 GCN1Q92616 2671 aaKnown RBP10.16□□□□□ -0.78
PRKCH-218ENST00000555628 TICRRQ7Z2Z1 1910 aa10.16□□□□□ -0.78
PRKCH-218ENST00000555628 ZBTB43O43298 467 aa10.16□□□□□ -0.78
PRKCH-218ENST00000555628 CHMP2AO43633 222 aa10.16□□□□□ -0.78
PRKCH-218ENST00000555628 TSPAN1O60635 241 aa10.16□□□□□ -0.78
PRKCH-218ENST00000555628 GAS7O60861 476 aa10.16□□□□□ -0.78
PRKCH-218ENST00000555628 ECI2O75521 394 aa10.16□□□□□ -0.78
PRKCH-218ENST00000555628 RETP07949 1114 aa10.16□□□□□ -0.78
PRKCH-218ENST00000555628 PFKPQ01813 784 aa10.16□□□□□ -0.78
PRKCH-218ENST00000555628 GAS6Q14393 721 aa10.16□□□□□ -0.78
PRKCH-218ENST00000555628 CSRP2Q16527 193 aa10.16□□□□□ -0.78
PRKCH-218ENST00000555628 SLC5A9Q2M3M2 681 aa10.16□□□□□ -0.78
PRKCH-218ENST00000555628 USP41Q3LFD5 358 aa10.16□□□□□ -0.78
PRKCH-218ENST00000555628 LRCH2Q5VUJ6 765 aa10.16□□□□□ -0.78
PRKCH-218ENST00000555628 PLA2G4FQ68DD2 849 aa10.16□□□□□ -0.78
PRKCH-218ENST00000555628 PRSS55Q6UWB4 352 aaPredicted RBP10.16□□□□□ -0.78
PRKCH-218ENST00000555628 PRR23CQ6ZRP0 262 aa10.16□□□□□ -0.78
PRKCH-218ENST00000555628 SRGAP1Q7Z6B7 1085 aa10.16□□□□□ -0.78
PRKCH-218ENST00000555628 PIK3R5Q8WYR1 880 aa10.16□□□□□ -0.78
PRKCH-218ENST00000555628 PAAF1Q9BRP4 392 aa10.16□□□□□ -0.78
PRKCH-218ENST00000555628 C1QTNF2Q9BXJ5 285 aa10.16□□□□□ -0.78
PRKCH-218ENST00000555628 UBN1Q9NPG3 1134 aa10.16□□□□□ -0.78
PRKCH-218ENST00000555628 SEMA4GQ9NTN9 838 aa10.16□□□□□ -0.78
PRKCH-218ENST00000555628 GMPR2Q9P2T1 348 aaKnown RBP10.16□□□□□ -0.78
PRKCH-218ENST00000555628 CACNG4Q9UBN1 327 aa10.16□□□□□ -0.78
PRKCH-218ENST00000555628 GMEB2Q9UKD1 530 aa10.16□□□□□ -0.78
PRKCH-218ENST00000555628 ADAM28Q9UKQ2 775 aa10.16□□□□□ -0.78
PRKCH-218ENST00000555628 HES2Q9Y543 173 aa10.16□□□□□ -0.78
PRKCH-218ENST00000555628 CYP3A7-CYP3A51PA0A087WV96 503 aa10.15□□□□□ -0.78
PRKCH-218ENST00000555628 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.15□□□□□ -0.78
PRKCH-218ENST00000555628 C8AP07357 584 aa10.15□□□□□ -0.78
PRKCH-218ENST00000555628 CYP3A7P24462 503 aa10.15□□□□□ -0.78
PRKCH-218ENST00000555628 DNM2P50570 870 aa10.15□□□□□ -0.78
PRKCH-218ENST00000555628 LIMK1P53667 647 aa10.15□□□□□ -0.78
PRKCH-218ENST00000555628 NPEPPSP55786 919 aa10.15□□□□□ -0.78
PRKCH-218ENST00000555628 CREMQ03060 361 aa10.15□□□□□ -0.78
PRKCH-218ENST00000555628 ADCY1Q08828 1119 aa10.15□□□□□ -0.78
PRKCH-218ENST00000555628 LAMTOR4Q0VGL1 99 aa10.15□□□□□ -0.78
PRKCH-218ENST00000555628 NNTQ13423 1086 aa10.15□□□□□ -0.78
PRKCH-218ENST00000555628 NAB2Q15742 525 aa10.15□□□□□ -0.78
PRKCH-218ENST00000555628 Q4G0T1 1027 aa10.15□□□□□ -0.78
PRKCH-218ENST00000555628 WDR44Q5JSH3 913 aa10.15□□□□□ -0.78
PRKCH-218ENST00000555628 GLYCTKQ8IVS8 523 aa10.15□□□□□ -0.78
PRKCH-218ENST00000555628 CELF5Q8N6W0 485 aaKnown RBP10.15□□□□□ -0.78
PRKCH-218ENST00000555628 CNNM3Q8NE01 707 aa10.15□□□□□ -0.78
PRKCH-218ENST00000555628 LNX1Q8TBB1 728 aaPredicted RBP10.15□□□□□ -0.78
PRKCH-218ENST00000555628 PRPF31Q8WWY3 499 aaKnown RBP10.15□□□□□ -0.78
PRKCH-218ENST00000555628 DNASE1L2Q92874 299 aa10.15□□□□□ -0.78
PRKCH-218ENST00000555628 CCDC51Q96ER9 411 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms