RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 BACE1P56817 501 aa4.98□□□□□ -1.61
VTI1B-203ENST00000554636 RBM10P98175 930 aaKnown RBP4.98□□□□□ -1.61
VTI1B-203ENST00000554636 IFRD2Q12894 506 aaPredicted RBP4.98□□□□□ -1.61
VTI1B-203ENST00000554636 SPP2Q13103 211 aa4.98□□□□□ -1.61
VTI1B-203ENST00000554636 UBE3CQ15386 1083 aa4.98□□□□□ -1.61
VTI1B-203ENST00000554636 TESK1Q15569 626 aa4.98□□□□□ -1.61
VTI1B-203ENST00000554636 NTRK3Q16288 839 aa4.98□□□□□ -1.61
VTI1B-203ENST00000554636 MTERF2Q49AM1 385 aa4.98□□□□□ -1.61
VTI1B-203ENST00000554636 SLC9C2Q5TAH2 1124 aa4.98□□□□□ -1.61
VTI1B-203ENST00000554636 TATDN1Q6P1N9 297 aa4.98□□□□□ -1.61
VTI1B-203ENST00000554636 FERMT3Q86UX7 667 aa4.98□□□□□ -1.61
VTI1B-203ENST00000554636 RBM12BQ8IXT5 1001 aaKnown RBP4.98□□□□□ -1.61
VTI1B-203ENST00000554636 LRRC47Q8N1G4 583 aaKnown RBP4.98□□□□□ -1.61
VTI1B-203ENST00000554636 ST13P5Q8NFI4 369 aaPredicted RBP4.98□□□□□ -1.61
VTI1B-203ENST00000554636 PIP4K2CQ8TBX8 421 aa4.98□□□□□ -1.61
VTI1B-203ENST00000554636 OTUD7AQ8TE49 926 aaPredicted RBP4.98□□□□□ -1.61
VTI1B-203ENST00000554636 SDR42E1Q8WUS8 393 aa4.98□□□□□ -1.61
VTI1B-203ENST00000554636 OSBP2Q969R2 916 aa4.98□□□□□ -1.61
VTI1B-203ENST00000554636 ZNF333Q96JL9 665 aa4.98□□□□□ -1.61
VTI1B-203ENST00000554636 CRNKL1Q9BZJ0 848 aaKnown RBP4.98□□□□□ -1.61
VTI1B-203ENST00000554636 ARMT1Q9H993 441 aa4.98□□□□□ -1.61
VTI1B-203ENST00000554636 GPR27Q9NS67 375 aa4.98□□□□□ -1.61
VTI1B-203ENST00000554636 ECHDC1Q9NTX5 307 aa4.98□□□□□ -1.61
VTI1B-203ENST00000554636 NCANO14594 1321 aa4.97□□□□□ -1.61
VTI1B-203ENST00000554636 PLXNB2O15031 1838 aa4.97□□□□□ -1.61
VTI1B-203ENST00000554636 TNRC18O15417 2968 aaPredicted RBP4.97□□□□□ -1.61
VTI1B-203ENST00000554636 SMIM22K7EJ46 135 aa4.97□□□□□ -1.61
VTI1B-203ENST00000554636 SLC27A2O14975 620 aa4.97□□□□□ -1.61
VTI1B-203ENST00000554636 PRICKLE3O43900 615 aaPredicted RBP4.97□□□□□ -1.61
VTI1B-203ENST00000554636 MBD4O95243 580 aa4.97□□□□□ -1.61
VTI1B-203ENST00000554636 GH2P01242 217 aa4.97□□□□□ -1.61
VTI1B-203ENST00000554636 FGFR1P11362 822 aa4.97□□□□□ -1.61
VTI1B-203ENST00000554636 COL6A2P12110 1019 aa4.97□□□□□ -1.61
VTI1B-203ENST00000554636 SYN1P17600 705 aa4.97□□□□□ -1.61
VTI1B-203ENST00000554636 GRK2P25098 689 aa4.97□□□□□ -1.61
VTI1B-203ENST00000554636 GRK3P35626 688 aa4.97□□□□□ -1.61
VTI1B-203ENST00000554636 PSMC4P43686 418 aa4.97□□□□□ -1.61
VTI1B-203ENST00000554636 HMGCS2P54868 508 aa4.97□□□□□ -1.61
VTI1B-203ENST00000554636 GJA9P57773 515 aa4.97□□□□□ -1.61
VTI1B-203ENST00000554636 NKX3-2P78367 333 aa4.97□□□□□ -1.61
VTI1B-203ENST00000554636 GRIN1Q05586 938 aa4.97□□□□□ -1.61
VTI1B-203ENST00000554636 SSRP1Q08945 709 aaKnown RBP4.97□□□□□ -1.61
VTI1B-203ENST00000554636 HDAC1Q13547 482 aaPredicted RBP4.97□□□□□ -1.61
VTI1B-203ENST00000554636 FAM110CQ1W6H9 321 aa4.97□□□□□ -1.61
VTI1B-203ENST00000554636 CR1LQ2VPA4 569 aa4.97□□□□□ -1.61
VTI1B-203ENST00000554636 TMC5Q6UXY8 1006 aa4.97□□□□□ -1.61
VTI1B-203ENST00000554636 KBTBD3Q8NAB2 608 aa4.97□□□□□ -1.61
VTI1B-203ENST00000554636 SLC44A5Q8NCS7 719 aa4.97□□□□□ -1.61
VTI1B-203ENST00000554636 TOE1Q96GM8 510 aaKnown RBP4.97□□□□□ -1.61
VTI1B-203ENST00000554636 C12orf42Q96LP6 360 aa4.97□□□□□ -1.61
VTI1B-203ENST00000554636 CDC6Q99741 560 aa4.97□□□□□ -1.61
VTI1B-203ENST00000554636 BDH2Q9BUT1 245 aa4.97□□□□□ -1.61
VTI1B-203ENST00000554636 SPATA9Q9BWV2 254 aa4.97□□□□□ -1.61
VTI1B-203ENST00000554636 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.97□□□□□ -1.61
VTI1B-203ENST00000554636 PUS7LQ9H0K6 701 aaKnown RBP4.97□□□□□ -1.61
VTI1B-203ENST00000554636 AS3MTQ9HBK9 375 aa4.97□□□□□ -1.61
VTI1B-203ENST00000554636 MCM9Q9NXL9 1143 aa4.97□□□□□ -1.61
VTI1B-203ENST00000554636 RBPJLQ9UBG7 517 aa4.97□□□□□ -1.61
VTI1B-203ENST00000554636 SRRDQ9UH36 339 aa4.97□□□□□ -1.61
VTI1B-203ENST00000554636 SERPINB13Q9UIV8 391 aa4.97□□□□□ -1.61
VTI1B-203ENST00000554636 TRAF6Q9Y4K3 522 aa4.97□□□□□ -1.61
VTI1B-203ENST00000554636 RLFQ13129 1914 aa4.97□□□□□ -1.61
VTI1B-203ENST00000554636 A0A0G2JMZ2 1700 aa4.97□□□□□ -1.61
VTI1B-203ENST00000554636 TTC41PQ6P2S7 1318 aa4.97□□□□□ -1.61
VTI1B-203ENST00000554636 MYPNQ86TC9 1320 aa4.97□□□□□ -1.61
VTI1B-203ENST00000554636 PARP14Q460N5 1801 aa4.96□□□□□ -1.62
VTI1B-203ENST00000554636 CYP2D7A0A087X1C5 515 aa4.96□□□□□ -1.62
VTI1B-203ENST00000554636 C19orf81C9J6K1 198 aa4.96□□□□□ -1.62
VTI1B-203ENST00000554636 M0R2C6 588 aa4.96□□□□□ -1.62
VTI1B-203ENST00000554636 LTFP02788 710 aa4.96□□□□□ -1.62
VTI1B-203ENST00000554636 HOXA7P31268 230 aaPredicted RBP4.96□□□□□ -1.62
VTI1B-203ENST00000554636 THBS2P35442 1172 aa4.96□□□□□ -1.62
VTI1B-203ENST00000554636 PRMT2P55345 433 aa4.96□□□□□ -1.62
VTI1B-203ENST00000554636 PRKCZQ05513 592 aa4.96□□□□□ -1.62
VTI1B-203ENST00000554636 KIF22Q14807 665 aa4.96□□□□□ -1.62
VTI1B-203ENST00000554636 RTP5Q14D33 572 aa4.96□□□□□ -1.62
VTI1B-203ENST00000554636 ARHGEF6Q15052 776 aa4.96□□□□□ -1.62
VTI1B-203ENST00000554636 ABCB5Q2M3G0 1257 aa4.96□□□□□ -1.62
VTI1B-203ENST00000554636 PHF19Q5T6S3 580 aa4.96□□□□□ -1.62
VTI1B-203ENST00000554636 MCTP2Q6DN12 878 aa4.96□□□□□ -1.62
VTI1B-203ENST00000554636 FRMD5Q7Z6J6 570 aa4.96□□□□□ -1.62
VTI1B-203ENST00000554636 ZNF761Q86XN6 746 aaPredicted RBP4.96□□□□□ -1.62
VTI1B-203ENST00000554636 ANKRD13CQ8N6S4 541 aa4.96□□□□□ -1.62
VTI1B-203ENST00000554636 LINC00482Q8N8I6 264 aa4.96□□□□□ -1.62
VTI1B-203ENST00000554636 KYQ8NBH2 561 aa4.96□□□□□ -1.62
VTI1B-203ENST00000554636 ACER1Q8TDN7 264 aa4.96□□□□□ -1.62
VTI1B-203ENST00000554636 ADAMTS17Q8TE56 1095 aa4.96□□□□□ -1.62
VTI1B-203ENST00000554636 SMCR8Q8TEV9 937 aaPredicted RBP4.96□□□□□ -1.62
VTI1B-203ENST00000554636 SH3TC2Q8TF17 1288 aa4.96□□□□□ -1.62
VTI1B-203ENST00000554636 DCAF4Q8WV16 495 aa4.96□□□□□ -1.62
VTI1B-203ENST00000554636 APPBP2Q92624 585 aa4.96□□□□□ -1.62
VTI1B-203ENST00000554636 DYNLL2Q96FJ2 89 aa4.96□□□□□ -1.62
VTI1B-203ENST00000554636 GPATCH3Q96I76 525 aa4.96□□□□□ -1.62
VTI1B-203ENST00000554636 CDIP1Q9H305 208 aa4.96□□□□□ -1.62
VTI1B-203ENST00000554636 DTLQ9NZJ0 730 aa4.96□□□□□ -1.62
VTI1B-203ENST00000554636 TMOD4Q9NZQ9 345 aa4.96□□□□□ -1.62
VTI1B-203ENST00000554636 MORF4L1Q9UBU8 362 aa4.96□□□□□ -1.62
VTI1B-203ENST00000554636 SWAP70Q9UH65 585 aa4.96□□□□□ -1.62
VTI1B-203ENST00000554636 GABRQQ9UN88 632 aa4.96□□□□□ -1.62
VTI1B-203ENST00000554636 DUSP10Q9Y6W6 482 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms