RNA–Protein interactions for RNA: ENST00000554439.5

PRPF39-207, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,982 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-207ENST00000554439 STXBP3O00186 592 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 CEP104O60308 925 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 SMNDC1O75940 238 aaKnown RBP eCLIP2.78□□□□□ -1.966e-25■■■□□ 17.2
PRPF39-207ENST00000554439 NEBLO76041 1014 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 SHBGP04278 402 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 GSTP1P09211 210 aaKnown RBP2.78□□□□□ -1.96
PRPF39-207ENST00000554439 CYP19A1P11511 503 aaPredicted RBP2.78□□□□□ -1.96
PRPF39-207ENST00000554439 ACTN1P12814 892 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 NME1P15531 152 aaKnown RBP2.78□□□□□ -1.96
PRPF39-207ENST00000554439 EIF2AK2P19525 551 aaKnown RBP2.78□□□□□ -1.96
PRPF39-207ENST00000554439 FGFR3P22607 806 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 TFAP4Q01664 338 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 PABPC4Q13310 644 aaKnown RBP eCLIP2.78□□□□□ -1.96
PRPF39-207ENST00000554439 RAPGEF1Q13905 1077 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 PPP2R5AQ15172 486 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 NAB2Q15742 525 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 MAN2A1Q16706 1144 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 NBPF9Q3BBW0 867 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 FAM83BQ5T0W9 1011 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 EMC10Q5UCC4 262 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 PPP4R3AQ6IN85 833 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 TMED8Q6PL24 325 aaPredicted RBP2.78□□□□□ -1.96
PRPF39-207ENST00000554439 VHLLQ6RSH7 139 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 LRRC55Q6ZSA7 311 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 KCNK18Q7Z418 384 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 ADAT2Q7Z6V5 191 aaKnown RBP2.78□□□□□ -1.96
PRPF39-207ENST00000554439 SYT9Q86SS6 491 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 RPAINQ86UA6 219 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 SPATS2Q86XZ4 545 aaKnown RBP2.78□□□□□ -1.96
PRPF39-207ENST00000554439 FAM114A1Q8IWE2 563 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 NELFCDQ8IXH7 590 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 MREGQ8N565 214 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 SLC44A5Q8NCS7 719 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 GPBAR1Q8TDU6 330 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 NOC3LQ8WTT2 800 aaKnown RBP2.78□□□□□ -1.96
PRPF39-207ENST00000554439 HVCN1Q96D96 273 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 MFSD3Q96ES6 412 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 STAMBPL1Q96FJ0 436 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 THOC1Q96FV9 657 aaKnown RBP2.78□□□□□ -1.96
PRPF39-207ENST00000554439 SLC9A7Q96T83 725 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 C7orf25Q9BPX7 421 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 LSM14BQ9BX40 385 aaKnown RBP2.78□□□□□ -1.96
PRPF39-207ENST00000554439 EMILIN2Q9BXX0 1053 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 DPH5Q9H2P9 285 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 VEZTQ9HBM0 779 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 VAT1LQ9HCJ6 419 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 DCP1AQ9NPI6 582 aaPredicted RBP2.78□□□□□ -1.96
PRPF39-207ENST00000554439 PLCB1Q9NQ66 1216 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 PRDM11Q9NQV5 511 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 TCP11L1Q9NUJ3 509 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 BLOC1S4Q9NUP1 217 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 GMIPQ9P107 970 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 MAD2L2Q9UI95 211 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 KLF15Q9UIH9 416 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.78□□□□□ -1.96
PRPF39-207ENST00000554439 NR2E1Q9Y466 385 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 L3MBTL1Q9Y468 752 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 DLEC1Q9Y238 1755 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 CCDC88AQ3V6T2 1871 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 NHSL1Q5SYE7 1610 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 A0A1B0GUL6 1792 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 ZNF142P52746 1687 aaPredicted RBP2.77□□□□□ -1.97
PRPF39-207ENST00000554439 NPHP3-ACAD11A0A0J9YXS1 232 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 A6NNZ2 444 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 TNFRSF10CO14798 259 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 TM4SF5O14894 197 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 TTI1O43156 1089 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 SART1O43290 800 aaKnown RBP2.77□□□□□ -1.97
PRPF39-207ENST00000554439 SLC37A4O43826 429 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 SUSD5O60279 629 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 CAND2O75155 1236 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 RFPL3O75679 317 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 GHRHP01286 108 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 CAPNS1P04632 268 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 OR52Z1P0C646 297 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 MYBP10242 640 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 IL2RBP14784 551 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 GCFC2P16383 781 aaKnown RBP2.77□□□□□ -1.97
PRPF39-207ENST00000554439 MX2P20592 715 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 DRD4P21917 467 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 CALML3P27482 149 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 PRDX5P30044 214 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 CLNS1AP54105 237 aaKnown RBP2.77□□□□□ -1.97
PRPF39-207ENST00000554439 PPP2R2AP63151 447 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 ELF3P78545 371 aaPredicted RBP2.77□□□□□ -1.97
PRPF39-207ENST00000554439 MECOMQ03112 1051 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 GRB10Q13322 594 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 NAA25Q14CX7 972 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 TUBB8Q3ZCM7 444 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 SLC9C1Q4G0N8 1177 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 FBLN7Q53RD9 439 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 FAM133BQ5BKY9 247 aaKnown RBP2.77□□□□□ -1.97
PRPF39-207ENST00000554439 SFMBT2Q5VUG0 894 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 CDCP2Q5VXM1 449 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 NAIF1Q69YI7 327 aaPredicted RBP2.77□□□□□ -1.97
PRPF39-207ENST00000554439 HIBCHQ6NVY1 386 aaPredicted RBP2.77□□□□□ -1.97
PRPF39-207ENST00000554439 CNNM4Q6P4Q7 775 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 CPLX4Q7Z7G2 160 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 ZNF34Q8IZ26 560 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 CACNA2D3Q8IZS8 1091 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms