RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 PPFIBP1Q86W92 1011 aa19.94■□□□□ 0.78
SHMT2-206ENST00000553529 SFR1Q86XK3 245 aa19.94■□□□□ 0.78
SHMT2-206ENST00000553529 EDAQ92838 391 aa19.94■□□□□ 0.78
SHMT2-206ENST00000553529 BICD1Q96G01 975 aa19.94■□□□□ 0.78
SHMT2-206ENST00000553529 ACAP3Q96P50 834 aa19.94■□□□□ 0.78
SHMT2-206ENST00000553529 TTPALQ9BTX7 342 aa19.94■□□□□ 0.78
SHMT2-206ENST00000553529 TIPINQ9BVW5 301 aa19.94■□□□□ 0.78
SHMT2-206ENST00000553529 C17orf75Q9HAS0 396 aa19.94■□□□□ 0.78
SHMT2-206ENST00000553529 LIMD1Q9UGP4 676 aa19.94■□□□□ 0.78
SHMT2-206ENST00000553529 TBX20Q9UMR3 447 aa19.94■□□□□ 0.78
SHMT2-206ENST00000553529 SRPRBQ9Y5M8 271 aaKnown RBP19.94■□□□□ 0.78
SHMT2-206ENST00000553529 FAM189A1O60320 539 aa19.93■□□□□ 0.78
SHMT2-206ENST00000553529 TOM1L1O75674 476 aa19.93■□□□□ 0.78
SHMT2-206ENST00000553529 BRD1O95696 1058 aa19.93■□□□□ 0.78
SHMT2-206ENST00000553529 BMP15O95972 392 aa19.93■□□□□ 0.78
SHMT2-206ENST00000553529 KRT18P05783 430 aaKnown RBP19.93■□□□□ 0.78
SHMT2-206ENST00000553529 MTHFRP42898 656 aa19.93■□□□□ 0.78
SHMT2-206ENST00000553529 MATR3P43243 847 aaKnown RBP eCLIP19.93■□□□□ 0.78
SHMT2-206ENST00000553529 KCNA1Q09470 495 aa19.93■□□□□ 0.78
SHMT2-206ENST00000553529 ATAT1Q5SQI0 421 aa19.93■□□□□ 0.78
SHMT2-206ENST00000553529 ZSWIM2Q8NEG5 633 aa19.93■□□□□ 0.78
SHMT2-206ENST00000553529 SNX21Q969T3 373 aa19.93■□□□□ 0.78
SHMT2-206ENST00000553529 DDX27Q96GQ7 796 aaKnown RBP19.93■□□□□ 0.78
SHMT2-206ENST00000553529 FAM84AQ96KN4 292 aa19.93■□□□□ 0.78
SHMT2-206ENST00000553529 CNTN3Q9P232 1028 aa19.93■□□□□ 0.78
SHMT2-206ENST00000553529 ODF2LQ9ULJ1 636 aa19.93■□□□□ 0.78
SHMT2-206ENST00000553529 MTCL1Q9Y4B5 1905 aaKnown RBP19.92■□□□□ 0.78
SHMT2-206ENST00000553529 CARNS1A5YM72 827 aa19.92■□□□□ 0.78
SHMT2-206ENST00000553529 PODXLO00592 558 aa19.92■□□□□ 0.78
SHMT2-206ENST00000553529 PPEF2O14830 753 aa19.92■□□□□ 0.78
SHMT2-206ENST00000553529 TRAK2O60296 914 aa19.92■□□□□ 0.78
SHMT2-206ENST00000553529 DDIT3P35638 169 aa19.92■□□□□ 0.78
SHMT2-206ENST00000553529 SMTNP53814 917 aa19.92■□□□□ 0.78
SHMT2-206ENST00000553529 YARSP54577 528 aaKnown RBP19.92■□□□□ 0.78
SHMT2-206ENST00000553529 MCL1Q07820 350 aa19.92■□□□□ 0.78
SHMT2-206ENST00000553529 PTPN21Q16825 1174 aa19.92■□□□□ 0.78
SHMT2-206ENST00000553529 TRIM67Q6ZTA4 783 aa19.92■□□□□ 0.78
SHMT2-206ENST00000553529 PDILTQ8N807 584 aa19.92■□□□□ 0.78
SHMT2-206ENST00000553529 KREMEN2Q8NCW0 462 aa19.92■□□□□ 0.78
SHMT2-206ENST00000553529 RSAD2Q8WXG1 361 aa19.92■□□□□ 0.78
SHMT2-206ENST00000553529 PIK3R5Q8WYR1 880 aa19.92■□□□□ 0.78
SHMT2-206ENST00000553529 RIPOR3Q96MK2 946 aa19.92■□□□□ 0.78
SHMT2-206ENST00000553529 KCND2Q9NZV8 630 aa19.92■□□□□ 0.78
SHMT2-206ENST00000553529 ANK1P16157 1881 aa19.91■□□□□ 0.78
SHMT2-206ENST00000553529 TMEM221A6NGB7 291 aa19.91■□□□□ 0.78
SHMT2-206ENST00000553529 M0R296 226 aa19.91■□□□□ 0.78
SHMT2-206ENST00000553529 FGFR3P22607 806 aa19.91■□□□□ 0.78
SHMT2-206ENST00000553529 CDR1P51861 262 aa19.91■□□□□ 0.78
SHMT2-206ENST00000553529 CASP5P51878 434 aa19.91■□□□□ 0.78
SHMT2-206ENST00000553529 SLC39A14Q15043 492 aa19.91■□□□□ 0.78
SHMT2-206ENST00000553529 SCARA3Q6AZY7 606 aa19.91■□□□□ 0.78
SHMT2-206ENST00000553529 TDRD5Q8NAT2 981 aaKnown RBP19.91■□□□□ 0.78
SHMT2-206ENST00000553529 GLIS3Q8NEA6 775 aa19.91■□□□□ 0.78
SHMT2-206ENST00000553529 SMG7Q92540 1137 aaKnown RBP19.91■□□□□ 0.78
SHMT2-206ENST00000553529 ASIC4Q96FT7 647 aa19.91■□□□□ 0.78
SHMT2-206ENST00000553529 MYADMQ96S97 322 aa19.91■□□□□ 0.78
SHMT2-206ENST00000553529 PARVGQ9HBI0 331 aa19.91■□□□□ 0.78
SHMT2-206ENST00000553529 LARSQ9P2J5 1176 aaKnown RBP19.91■□□□□ 0.78
SHMT2-206ENST00000553529 COL4A3Q01955 1670 aa19.91■□□□□ 0.78
SHMT2-206ENST00000553529 MYO10Q9HD67 2058 aa19.9■□□□□ 0.78
SHMT2-206ENST00000553529 LACTBL1A8MY62 500 aa19.9■□□□□ 0.78
SHMT2-206ENST00000553529 HNRNPDLO14979 420 aaKnown RBP19.9■□□□□ 0.78
SHMT2-206ENST00000553529 CLDN3O15551 220 aa19.9■□□□□ 0.78
SHMT2-206ENST00000553529 TBCAO75347 108 aaKnown RBP19.9■□□□□ 0.78
SHMT2-206ENST00000553529 KCNE1P15382 129 aa19.9■□□□□ 0.78
SHMT2-206ENST00000553529 OR1D2P34982 312 aa19.9■□□□□ 0.78
SHMT2-206ENST00000553529 NASPP49321 788 aaPredicted RBP19.9■□□□□ 0.78
SHMT2-206ENST00000553529 LIG4P49917 911 aa19.9■□□□□ 0.78
SHMT2-206ENST00000553529 WNT7BP56706 349 aa19.9■□□□□ 0.78
SHMT2-206ENST00000553529 ENOX2Q16206 610 aaKnown RBP19.9■□□□□ 0.78
SHMT2-206ENST00000553529 DCLRE1AQ6PJP8 1040 aa19.9■□□□□ 0.78
SHMT2-206ENST00000553529 ZPBP2Q6X784 338 aa19.9■□□□□ 0.78
SHMT2-206ENST00000553529 LINC00301Q8NCQ3 95 aa19.9■□□□□ 0.78
SHMT2-206ENST00000553529 DDX12PQ92771 950 aa19.9■□□□□ 0.78
SHMT2-206ENST00000553529 HPS3Q969F9 1004 aa19.9■□□□□ 0.78
SHMT2-206ENST00000553529 DNAJC19Q96DA6 116 aa19.9■□□□□ 0.78
SHMT2-206ENST00000553529 NECTIN4Q96NY8 510 aa19.9■□□□□ 0.78
SHMT2-206ENST00000553529 FNIP2Q9P278 1114 aa19.9■□□□□ 0.78
SHMT2-206ENST00000553529 CDY1Q9Y6F8 540 aa19.9■□□□□ 0.78
SHMT2-206ENST00000553529 KMT2EQ8IZD2 1858 aa19.9■□□□□ 0.78
SHMT2-206ENST00000553529 TMEM189-UBE2V1I3L0A0 370 aa19.89■□□□□ 0.77
SHMT2-206ENST00000553529 NRG2O14511 850 aaPredicted RBP19.89■□□□□ 0.77
SHMT2-206ENST00000553529 CCL16O15467 120 aa19.89■□□□□ 0.77
SHMT2-206ENST00000553529 VCPP55072 806 aaKnown RBP19.89■□□□□ 0.77
SHMT2-206ENST00000553529 IER5LQ5T953 404 aa19.89■□□□□ 0.77
SHMT2-206ENST00000553529 RRAGBQ5VZM2 374 aa19.89■□□□□ 0.77
SHMT2-206ENST00000553529 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.89■□□□□ 0.77
SHMT2-206ENST00000553529 HSCBQ8IWL3 235 aa19.89■□□□□ 0.77
SHMT2-206ENST00000553529 FAM212AQ96EL1 285 aa19.89■□□□□ 0.77
SHMT2-206ENST00000553529 TOPORSQ9NS56 1045 aaPredicted RBP19.89■□□□□ 0.77
SHMT2-206ENST00000553529 HCFC1R1Q9NWW0 138 aa19.89■□□□□ 0.77
SHMT2-206ENST00000553529 DAXXQ9UER7 740 aaPredicted RBP19.89■□□□□ 0.77
SHMT2-206ENST00000553529 FBXW11Q9UKB1 542 aa19.89■□□□□ 0.77
SHMT2-206ENST00000553529 SSX2IPQ9Y2D8 614 aa19.89■□□□□ 0.77
SHMT2-206ENST00000553529 NR2E1Q9Y466 385 aa19.89■□□□□ 0.77
SHMT2-206ENST00000553529 TIMM13Q9Y5L4 95 aaPredicted RBP19.89■□□□□ 0.77
SHMT2-206ENST00000553529 SLC26A4O43511 780 aa19.88■□□□□ 0.77
SHMT2-206ENST00000553529 NARSO43776 548 aaKnown RBP19.88■□□□□ 0.77
SHMT2-206ENST00000553529 NFICP08651 508 aa19.88■□□□□ 0.77
SHMT2-206ENST00000553529 CASP1P29466 404 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms