RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 CCAR2Q8N163 923 aaKnown RBP18.98■□□□□ 0.63
PSEN1-206ENST00000553447 ANKRD36BP1Q96IX9 119 aa18.98■□□□□ 0.63
PSEN1-206ENST00000553447 ZNF333Q96JL9 665 aa18.98■□□□□ 0.63
PSEN1-206ENST00000553447 TRIM6Q9C030 488 aaPredicted RBP18.98■□□□□ 0.63
PSEN1-206ENST00000553447 GPR88Q9GZN0 384 aa18.98■□□□□ 0.63
PSEN1-206ENST00000553447 UBE2TQ9NPD8 197 aaPredicted RBP18.98■□□□□ 0.63
PSEN1-206ENST00000553447 SNTG2Q9NY99 539 aa18.98■□□□□ 0.63
PSEN1-206ENST00000553447 ARHGAP20Q9P2F6 1191 aa18.98■□□□□ 0.63
PSEN1-206ENST00000553447 GPR182O15218 404 aa18.97■□□□□ 0.63
PSEN1-206ENST00000553447 SERPING1P05155 500 aa18.97■□□□□ 0.63
PSEN1-206ENST00000553447 NFICP08651 508 aa18.97■□□□□ 0.63
PSEN1-206ENST00000553447 TMEM191BP0C7N4 346 aa18.97■□□□□ 0.63
PSEN1-206ENST00000553447 LBX1P52954 281 aa18.97■□□□□ 0.63
PSEN1-206ENST00000553447 PKN2Q16513 984 aaKnown RBP18.97■□□□□ 0.63
PSEN1-206ENST00000553447 ZNF618Q5T7W0 954 aa18.97■□□□□ 0.63
PSEN1-206ENST00000553447 HGSNATQ68CP4 663 aa18.97■□□□□ 0.63
PSEN1-206ENST00000553447 JADE1Q6IE81 842 aa18.97■□□□□ 0.63
PSEN1-206ENST00000553447 TRAPPC11Q7Z392 1133 aa18.97■□□□□ 0.63
PSEN1-206ENST00000553447 GPIHBP1Q8IV16 184 aa18.97■□□□□ 0.63
PSEN1-206ENST00000553447 CCDC170Q8IYT3 715 aa18.97■□□□□ 0.63
PSEN1-206ENST00000553447 HELQQ8TDG4 1101 aa18.97■□□□□ 0.63
PSEN1-206ENST00000553447 ARMC5Q96C12 935 aa18.97■□□□□ 0.63
PSEN1-206ENST00000553447 PI4K2AQ9BTU6 479 aa18.97■□□□□ 0.63
PSEN1-206ENST00000553447 CRISPLD2Q9H0B8 497 aa18.97■□□□□ 0.63
PSEN1-206ENST00000553447 AGO3Q9H9G7 860 aaKnown RBP18.97■□□□□ 0.63
PSEN1-206ENST00000553447 NHEJ1Q9H9Q4 299 aaPredicted RBP18.97■□□□□ 0.63
PSEN1-206ENST00000553447 PLEKHA5Q9HAU0 1116 aa18.97■□□□□ 0.63
PSEN1-206ENST00000553447 ERVK-5Q9HDB9 667 aa18.97■□□□□ 0.63
PSEN1-206ENST00000553447 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.97■□□□□ 0.63
PSEN1-206ENST00000553447 CHST12Q9NRB3 414 aa18.97■□□□□ 0.63
PSEN1-206ENST00000553447 SPTLC3Q9NUV7 552 aa18.97■□□□□ 0.63
PSEN1-206ENST00000553447 PCNTO95613 3336 aa18.96■□□□□ 0.63
PSEN1-206ENST00000553447 PLEKP08567 350 aaPredicted RBP18.96■□□□□ 0.63
PSEN1-206ENST00000553447 CKBP12277 381 aa18.96■□□□□ 0.63
PSEN1-206ENST00000553447 FERP16591 822 aa18.96■□□□□ 0.63
PSEN1-206ENST00000553447 CYLC1P35663 651 aaPredicted RBP18.96■□□□□ 0.63
PSEN1-206ENST00000553447 SOX5P35711 763 aa18.96■□□□□ 0.63
PSEN1-206ENST00000553447 CTCFP49711 727 aaPredicted RBP18.96■□□□□ 0.63
PSEN1-206ENST00000553447 YARSP54577 528 aaKnown RBP18.96■□□□□ 0.63
PSEN1-206ENST00000553447 MFAP3P55082 362 aa18.96■□□□□ 0.63
PSEN1-206ENST00000553447 NFX1Q12986 1120 aaKnown RBP18.96■□□□□ 0.63
PSEN1-206ENST00000553447 MAPK8IP2Q13387 824 aaPredicted RBP18.96■□□□□ 0.63
PSEN1-206ENST00000553447 NCOA4Q13772 614 aa18.96■□□□□ 0.63
PSEN1-206ENST00000553447 LPIN1Q14693 890 aa18.96■□□□□ 0.63
PSEN1-206ENST00000553447 ARHGAP44Q17R89 818 aa18.96■□□□□ 0.63
PSEN1-206ENST00000553447 WDR44Q5JSH3 913 aa18.96■□□□□ 0.63
PSEN1-206ENST00000553447 TWF2Q6IBS0 349 aaKnown RBP18.96■□□□□ 0.63
PSEN1-206ENST00000553447 IRF2BP2Q7Z5L9 587 aa18.96■□□□□ 0.63
PSEN1-206ENST00000553447 NT5DC4Q86YG4 428 aa18.96■□□□□ 0.63
PSEN1-206ENST00000553447 FMNL3Q8IVF7 1028 aa18.96■□□□□ 0.63
PSEN1-206ENST00000553447 PPM1KQ8N3J5 372 aa18.96■□□□□ 0.63
PSEN1-206ENST00000553447 TATDN2Q93075 761 aa18.96■□□□□ 0.63
PSEN1-206ENST00000553447 SNX27Q96L92 541 aa18.96■□□□□ 0.63
PSEN1-206ENST00000553447 FAM81BQ96LP2 452 aa18.96■□□□□ 0.63
PSEN1-206ENST00000553447 KREMEN1Q96MU8 473 aa18.96■□□□□ 0.63
PSEN1-206ENST00000553447 DESI2Q9BSY9 194 aa18.96■□□□□ 0.63
PSEN1-206ENST00000553447 NXF3Q9H4D5 531 aaKnown RBP18.96■□□□□ 0.63
PSEN1-206ENST00000553447 RRAGDQ9NQL2 400 aaPredicted RBP18.96■□□□□ 0.63
PSEN1-206ENST00000553447 C1orf112Q9NSG2 853 aa18.96■□□□□ 0.63
PSEN1-206ENST00000553447 EPN1Q9Y6I3 576 aaPredicted RBP18.96■□□□□ 0.63
PSEN1-206ENST00000553447 SQORQ9Y6N5 450 aa18.96■□□□□ 0.63
PSEN1-206ENST00000553447 SSU72P8A0A1W2PR75 194 aa18.95■□□□□ 0.62
PSEN1-206ENST00000553447 USP27XA6NNY8 438 aa18.95■□□□□ 0.62
PSEN1-206ENST00000553447 CCP110O43303 1012 aa18.95■□□□□ 0.62
PSEN1-206ENST00000553447 ZSCAN12O43309 604 aa18.95■□□□□ 0.62
PSEN1-206ENST00000553447 NDUFA10O95299 355 aa18.95■□□□□ 0.62
PSEN1-206ENST00000553447 SGPL1O95470 568 aa18.95■□□□□ 0.62
PSEN1-206ENST00000553447 HSPA1AP0DMV8 641 aaKnown RBP18.95■□□□□ 0.62
PSEN1-206ENST00000553447 HSPA1BP0DMV9 641 aaKnown RBP18.95■□□□□ 0.62
PSEN1-206ENST00000553447 GHRP10912 638 aa18.95■□□□□ 0.62
PSEN1-206ENST00000553447 EIF4A3P38919 411 aaKnown RBP18.95■□□□□ 0.62
PSEN1-206ENST00000553447 PRKCIP41743 596 aa18.95■□□□□ 0.62
PSEN1-206ENST00000553447 ARID5AQ03989 594 aa18.95■□□□□ 0.62
PSEN1-206ENST00000553447 PAK2Q13177 524 aa18.95■□□□□ 0.62
PSEN1-206ENST00000553447 TDRD12Q587J7 1177 aaKnown RBP18.95■□□□□ 0.62
PSEN1-206ENST00000553447 TRAF7Q6Q0C0 670 aa18.95■□□□□ 0.62
PSEN1-206ENST00000553447 ENOSF1Q7L5Y1 443 aa18.95■□□□□ 0.62
PSEN1-206ENST00000553447 FAM126BQ8IXS8 530 aa18.95■□□□□ 0.62
PSEN1-206ENST00000553447 USP38Q8NB14 1042 aa18.95■□□□□ 0.62
PSEN1-206ENST00000553447 KAT5Q92993 513 aa18.95■□□□□ 0.62
PSEN1-206ENST00000553447 CCDC42Q96M95 316 aa18.95■□□□□ 0.62
PSEN1-206ENST00000553447 OSBPL7Q9BZF2 842 aa18.95■□□□□ 0.62
PSEN1-206ENST00000553447 TRMT1Q9NXH9 659 aaKnown RBP18.95■□□□□ 0.62
PSEN1-206ENST00000553447 PPP2R2CQ9Y2T4 447 aa18.95■□□□□ 0.62
PSEN1-206ENST00000553447 DERAQ9Y315 318 aa18.95■□□□□ 0.62
PSEN1-206ENST00000553447 C2CD2Q9Y426 696 aa18.95■□□□□ 0.62
PSEN1-206ENST00000553447 HES2Q9Y543 173 aa18.95■□□□□ 0.62
PSEN1-206ENST00000553447 IPPQ9Y573 584 aa18.95■□□□□ 0.62
PSEN1-206ENST00000553447 ADGRG1Q9Y653 693 aa18.95■□□□□ 0.62
PSEN1-206ENST00000553447 RBAK-RBAKDNI3L0D1 243 aa18.94■□□□□ 0.62
PSEN1-206ENST00000553447 RECQL4O94761 1208 aa18.94■□□□□ 0.62
PSEN1-206ENST00000553447 GFPT2O94808 682 aa18.94■□□□□ 0.62
PSEN1-206ENST00000553447 CST3P01034 146 aaPredicted RBP18.94■□□□□ 0.62
PSEN1-206ENST00000553447 CD4P01730 458 aa18.94■□□□□ 0.62
PSEN1-206ENST00000553447 TFRCP02786 760 aaKnown RBP18.94■□□□□ 0.62
PSEN1-206ENST00000553447 CCDC175P0C221 793 aa18.94■□□□□ 0.62
PSEN1-206ENST00000553447 PNMA6AP0CW24 399 aaPredicted RBP18.94■□□□□ 0.62
PSEN1-206ENST00000553447 CD52P31358 61 aa18.94■□□□□ 0.62
PSEN1-206ENST00000553447 GCNT1Q02742 428 aa18.94■□□□□ 0.62
PSEN1-206ENST00000553447 KLHL30Q0D2K2 578 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms