RNA–Protein interactions for RNA: ENST00000553154.5

CALCOCO1-222, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-222ENST00000553154 AARSP49588 968 aaKnown RBP eCLIP11.02□□□□□ -0.65
CALCOCO1-222ENST00000553154 ACOT2P49753 483 aa11.02□□□□□ -0.65
CALCOCO1-222ENST00000553154 YARSP54577 528 aaKnown RBP11.02□□□□□ -0.65
CALCOCO1-222ENST00000553154 UBE2HP62256 183 aa11.02□□□□□ -0.65
CALCOCO1-222ENST00000553154 SNRPFP62306 86 aaKnown RBP11.02□□□□□ -0.65
CALCOCO1-222ENST00000553154 PNOCQ13519 176 aa11.02□□□□□ -0.65
CALCOCO1-222ENST00000553154 HSP90AA2PQ14568 343 aaPredicted RBP11.02□□□□□ -0.65
CALCOCO1-222ENST00000553154 PTPN14Q15678 1187 aa11.02□□□□□ -0.65
CALCOCO1-222ENST00000553154 DUSP6Q16828 381 aa11.02□□□□□ -0.65
CALCOCO1-222ENST00000553154 UPP1Q16831 310 aa11.02□□□□□ -0.65
CALCOCO1-222ENST00000553154 COBLL1Q53SF7 1204 aa11.02□□□□□ -0.65
CALCOCO1-222ENST00000553154 SPOUT1Q5T280 376 aaKnown RBP11.02□□□□□ -0.65
CALCOCO1-222ENST00000553154 KANK3Q6NY19 840 aa11.02□□□□□ -0.65
CALCOCO1-222ENST00000553154 BRSK2Q8IWQ3 736 aa11.02□□□□□ -0.65
CALCOCO1-222ENST00000553154 EFCAB13Q8IY85 973 aa11.02□□□□□ -0.65
CALCOCO1-222ENST00000553154 GPR65Q8IYL9 337 aa11.02□□□□□ -0.65
CALCOCO1-222ENST00000553154 MRPL43Q8N983 215 aaKnown RBP11.02□□□□□ -0.65
CALCOCO1-222ENST00000553154 CXorf38Q8TB03 319 aa11.02□□□□□ -0.65
CALCOCO1-222ENST00000553154 RABGGTAQ92696 567 aa11.02□□□□□ -0.65
CALCOCO1-222ENST00000553154 C18orf25Q96B23 403 aaPredicted RBP11.02□□□□□ -0.65
CALCOCO1-222ENST00000553154 TSPAN18Q96SJ8 248 aa11.02□□□□□ -0.65
CALCOCO1-222ENST00000553154 GPR62Q9BZJ7 368 aa11.02□□□□□ -0.65
CALCOCO1-222ENST00000553154 EXOC1Q9NV70 894 aa11.02□□□□□ -0.65
CALCOCO1-222ENST00000553154 DMAC2Q9NW81 257 aa11.02□□□□□ -0.65
CALCOCO1-222ENST00000553154 TUBGCP4Q9UGJ1 667 aa11.02□□□□□ -0.65
CALCOCO1-222ENST00000553154 FAN1Q9Y2M0 1017 aa11.02□□□□□ -0.65
CALCOCO1-222ENST00000553154 PRG3Q9Y2Y8 225 aaPredicted RBP11.02□□□□□ -0.65
CALCOCO1-222ENST00000553154 PDCD11Q14690 1871 aaKnown RBP11.02□□□□□ -0.65
CALCOCO1-222ENST00000553154 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.01□□□□□ -0.65
CALCOCO1-222ENST00000553154 KIAA0391O15091 583 aaKnown RBP11.01□□□□□ -0.65
CALCOCO1-222ENST00000553154 EXTL3O43909 919 aa11.01□□□□□ -0.65
CALCOCO1-222ENST00000553154 SOD2P04179 222 aa11.01□□□□□ -0.65
CALCOCO1-222ENST00000553154 ALDH2P05091 517 aa11.01□□□□□ -0.65
CALCOCO1-222ENST00000553154 NFICP08651 508 aa11.01□□□□□ -0.65
CALCOCO1-222ENST00000553154 CYP3A5P20815 502 aa11.01□□□□□ -0.65
CALCOCO1-222ENST00000553154 GTF2F1P35269 517 aaKnown RBP eCLIP11.01□□□□□ -0.65
CALCOCO1-222ENST00000553154 LTBRP36941 435 aa11.01□□□□□ -0.65
CALCOCO1-222ENST00000553154 OR1G1P47890 313 aa11.01□□□□□ -0.65
CALCOCO1-222ENST00000553154 CLCNKBP51801 687 aa11.01□□□□□ -0.65
CALCOCO1-222ENST00000553154 MCCD1P59942 119 aaPredicted RBP11.01□□□□□ -0.65
CALCOCO1-222ENST00000553154 KNOP1Q1ED39 458 aaKnown RBP11.01□□□□□ -0.65
CALCOCO1-222ENST00000553154 KIAA0319Q5VV43 1072 aa11.01□□□□□ -0.65
CALCOCO1-222ENST00000553154 SPATA1Q5VX52 437 aa11.01□□□□□ -0.65
CALCOCO1-222ENST00000553154 FUT10Q6P4F1 479 aa11.01□□□□□ -0.65
CALCOCO1-222ENST00000553154 STXBP4Q6ZWJ1 553 aa11.01□□□□□ -0.65
CALCOCO1-222ENST00000553154 TAS1R1Q7RTX1 841 aa11.01□□□□□ -0.65
CALCOCO1-222ENST00000553154 SLC9A9Q8IVB4 645 aa11.01□□□□□ -0.65
CALCOCO1-222ENST00000553154 CD302Q8IX05 232 aa11.01□□□□□ -0.65
CALCOCO1-222ENST00000553154 VPS52Q8N1B4 723 aa11.01□□□□□ -0.65
CALCOCO1-222ENST00000553154 TMEM169Q96HH4 297 aa11.01□□□□□ -0.65
CALCOCO1-222ENST00000553154 UROC1Q96N76 676 aa11.01□□□□□ -0.65
CALCOCO1-222ENST00000553154 TCF25Q9BQ70 676 aa11.01□□□□□ -0.65
CALCOCO1-222ENST00000553154 ASB7Q9H672 318 aa11.01□□□□□ -0.65
CALCOCO1-222ENST00000553154 NGRNQ9NPE2 291 aaKnown RBP11.01□□□□□ -0.65
CALCOCO1-222ENST00000553154 SLC38A7Q9NVC3 462 aa11.01□□□□□ -0.65
CALCOCO1-222ENST00000553154 ADAM28Q9UKQ2 775 aa11.01□□□□□ -0.65
CALCOCO1-222ENST00000553154 DERAQ9Y315 318 aa11.01□□□□□ -0.65
CALCOCO1-222ENST00000553154 C2CD2Q9Y426 696 aa11.01□□□□□ -0.65
CALCOCO1-222ENST00000553154 PCDHA5Q9Y5H7 936 aa11.01□□□□□ -0.65
CALCOCO1-222ENST00000553154 CACNA1AO00555 2505 aa11□□□□□ -0.65
CALCOCO1-222ENST00000553154 ANO9A1A5B4 782 aa11□□□□□ -0.65
CALCOCO1-222ENST00000553154 TBX10O75333 385 aa11□□□□□ -0.65
CALCOCO1-222ENST00000553154 PAPLNO95428 1278 aa11□□□□□ -0.65
CALCOCO1-222ENST00000553154 BMP6P22004 513 aa11□□□□□ -0.65
CALCOCO1-222ENST00000553154 FGFR3P22607 806 aa11□□□□□ -0.65
CALCOCO1-222ENST00000553154 DSG1Q02413 1049 aa11□□□□□ -0.65
CALCOCO1-222ENST00000553154 KRT17Q04695 432 aa11□□□□□ -0.65
CALCOCO1-222ENST00000553154 PPP2R3AQ06190 1150 aa11□□□□□ -0.65
CALCOCO1-222ENST00000553154 CCDC85BQ15834 202 aaPredicted RBP11□□□□□ -0.65
CALCOCO1-222ENST00000553154 NFIL3Q16649 462 aa11□□□□□ -0.65
CALCOCO1-222ENST00000553154 SCARA3Q6AZY7 606 aa11□□□□□ -0.65
CALCOCO1-222ENST00000553154 JADE1Q6IE81 842 aa11□□□□□ -0.65
CALCOCO1-222ENST00000553154 DCLRE1AQ6PJP8 1040 aa11□□□□□ -0.65
CALCOCO1-222ENST00000553154 TMEM184AQ6ZMB5 413 aa11□□□□□ -0.65
CALCOCO1-222ENST00000553154 CBWD2Q8IUF1 395 aa11□□□□□ -0.65
CALCOCO1-222ENST00000553154 NELFCDQ8IXH7 590 aa11□□□□□ -0.65
CALCOCO1-222ENST00000553154 GUF1Q8N442 669 aaKnown RBP11□□□□□ -0.65
CALCOCO1-222ENST00000553154 EFHBQ8N7U6 833 aa11□□□□□ -0.65
CALCOCO1-222ENST00000553154 SLC22A17Q8WUG5 538 aa11□□□□□ -0.65
CALCOCO1-222ENST00000553154 POMGNT1Q8WZA1 660 aa11□□□□□ -0.65
CALCOCO1-222ENST00000553154 PABPC5Q96DU9 382 aaKnown RBP11□□□□□ -0.65
CALCOCO1-222ENST00000553154 SAAL1Q96ER3 474 aa11□□□□□ -0.65
CALCOCO1-222ENST00000553154 FAM193BQ96PV7 902 aaPredicted RBP11□□□□□ -0.65
CALCOCO1-222ENST00000553154 GSDMAQ96QA5 445 aa11□□□□□ -0.65
CALCOCO1-222ENST00000553154 FAM213AQ9BRX8 229 aa11□□□□□ -0.65
CALCOCO1-222ENST00000553154 COLEC11Q9BWP8 271 aa11□□□□□ -0.65
CALCOCO1-222ENST00000553154 RPF1Q9H9Y2 349 aaKnown RBP11□□□□□ -0.65
CALCOCO1-222ENST00000553154 RXFP1Q9HBX9 757 aa11□□□□□ -0.65
CALCOCO1-222ENST00000553154 LMBRD1Q9NUN5 540 aa11□□□□□ -0.65
CALCOCO1-222ENST00000553154 HSPBP1Q9NZL4 362 aa11□□□□□ -0.65
CALCOCO1-222ENST00000553154 CGNQ9P2M7 1197 aaKnown RBP11□□□□□ -0.65
CALCOCO1-222ENST00000553154 STK39Q9UEW8 545 aa11□□□□□ -0.65
CALCOCO1-222ENST00000553154 UBQLN1Q9UMX0 589 aaKnown RBP11□□□□□ -0.65
CALCOCO1-222ENST00000553154 TRAF3IP3Q9Y228 551 aa11□□□□□ -0.65
CALCOCO1-222ENST00000553154 GTF3C5Q9Y5Q8 519 aaPredicted RBP11□□□□□ -0.65
CALCOCO1-222ENST00000553154 PTPRJQ12913 1337 aa11□□□□□ -0.65
CALCOCO1-222ENST00000553154 TDRD15B5MCY1 1934 aaKnown RBP10.99□□□□□ -0.65
CALCOCO1-222ENST00000553154 GOLGA6L4A6NEF3 574 aa10.99□□□□□ -0.65
CALCOCO1-222ENST00000553154 TNFRSF10AO00220 468 aa10.99□□□□□ -0.65
CALCOCO1-222ENST00000553154 PODXLO00592 558 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms