RNA–Protein interactions for RNA: ENST00000548279.5

CACNB3-208, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-208ENST00000548279 RFPL2O75678 378 aa25.27■■□□□ 1.64
CACNB3-208ENST00000548279 B3GAT3O94766 335 aa25.27■■□□□ 1.64
CACNB3-208ENST00000548279 KCNE1P15382 129 aa25.27■■□□□ 1.64
CACNB3-208ENST00000548279 BRCC3P46736 316 aa25.27■■□□□ 1.64
CACNB3-208ENST00000548279 SLC39A4Q6P5W5 647 aa25.27■■□□□ 1.64
CACNB3-208ENST00000548279 LILRA6Q6PI73 481 aa25.27■■□□□ 1.64
CACNB3-208ENST00000548279 DYMQ7RTS9 669 aa25.27■■□□□ 1.64
CACNB3-208ENST00000548279 KRI1Q8N9T8 703 aaKnown RBP25.27■■□□□ 1.64
CACNB3-208ENST00000548279 LINC00301Q8NCQ3 95 aa25.27■■□□□ 1.64
CACNB3-208ENST00000548279 BICD1Q96G01 975 aa25.27■■□□□ 1.64
CACNB3-208ENST00000548279 CLSTN3Q9BQT9 956 aa25.27■■□□□ 1.64
CACNB3-208ENST00000548279 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP25.27■■□□□ 1.64
CACNB3-208ENST00000548279 TFIP11Q9UBB9 837 aaKnown RBP25.27■■□□□ 1.64
CACNB3-208ENST00000548279 CCDC39Q9UFE4 941 aa25.27■■□□□ 1.64
CACNB3-208ENST00000548279 SPDYE4A6NLX3 237 aa25.26■■□□□ 1.63
CACNB3-208ENST00000548279 I3L4J1 428 aa25.26■■□□□ 1.63
CACNB3-208ENST00000548279 ADAM12O43184 909 aa25.26■■□□□ 1.63
CACNB3-208ENST00000548279 TGM5O43548 720 aa25.26■■□□□ 1.63
CACNB3-208ENST00000548279 TBCAO75347 108 aaKnown RBP25.26■■□□□ 1.63
CACNB3-208ENST00000548279 PIGRP01833 764 aa25.26■■□□□ 1.63
CACNB3-208ENST00000548279 PSMD5Q16401 504 aa25.26■■□□□ 1.63
CACNB3-208ENST00000548279 ATAT1Q5SQI0 421 aa25.26■■□□□ 1.63
CACNB3-208ENST00000548279 ZBTB41Q5SVQ8 909 aa25.26■■□□□ 1.63
CACNB3-208ENST00000548279 RRAGBQ5VZM2 374 aa25.26■■□□□ 1.63
CACNB3-208ENST00000548279 DCLRE1AQ6PJP8 1040 aa25.26■■□□□ 1.63
CACNB3-208ENST00000548279 UROC1Q96N76 676 aa25.26■■□□□ 1.63
CACNB3-208ENST00000548279 PANK2Q9BZ23 570 aa25.26■■□□□ 1.63
CACNB3-208ENST00000548279 TRIOO75962 3097 aa25.25■■□□□ 1.63
CACNB3-208ENST00000548279 MYMKA6NI61 221 aa25.25■■□□□ 1.63
CACNB3-208ENST00000548279 PRR33A8MZF0 331 aa25.25■■□□□ 1.63
CACNB3-208ENST00000548279 FAM189A1O60320 539 aa25.25■■□□□ 1.63
CACNB3-208ENST00000548279 CXCL8P10145 99 aa25.25■■□□□ 1.63
CACNB3-208ENST00000548279 FGFR3P22607 806 aa25.25■■□□□ 1.63
CACNB3-208ENST00000548279 TNFSF9P41273 254 aa25.25■■□□□ 1.63
CACNB3-208ENST00000548279 PKP1Q13835 747 aa25.25■■□□□ 1.63
CACNB3-208ENST00000548279 ZC2HC1CQ53FD0 456 aaPredicted RBP25.25■■□□□ 1.63
CACNB3-208ENST00000548279 SFR1Q86XK3 245 aa25.25■■□□□ 1.63
CACNB3-208ENST00000548279 TECTAO75443 2155 aa25.25■■□□□ 1.63
CACNB3-208ENST00000548279 CCDC195A0A1B0GUA6 201 aa25.24■■□□□ 1.63
CACNB3-208ENST00000548279 HNRNPDLO14979 420 aaKnown RBP25.24■■□□□ 1.63
CACNB3-208ENST00000548279 TKTP29401 623 aaKnown RBP25.24■■□□□ 1.63
CACNB3-208ENST00000548279 MATR3P43243 847 aaKnown RBP eCLIP25.24■■□□□ 1.63
CACNB3-208ENST00000548279 LIG4P49917 911 aa25.24■■□□□ 1.63
CACNB3-208ENST00000548279 GTF2BQ00403 316 aa25.24■■□□□ 1.63
CACNB3-208ENST00000548279 SPAG1Q07617 926 aa25.24■■□□□ 1.63
CACNB3-208ENST00000548279 ELAVL2Q12926 359 aaKnown RBP25.24■■□□□ 1.63
CACNB3-208ENST00000548279 STK38Q15208 465 aa25.24■■□□□ 1.63
CACNB3-208ENST00000548279 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.24■■□□□ 1.63
CACNB3-208ENST00000548279 SPRYD3Q8NCJ5 442 aa25.24■■□□□ 1.63
CACNB3-208ENST00000548279 CMASQ8NFW8 434 aaPredicted RBP25.24■■□□□ 1.63
CACNB3-208ENST00000548279 DDX12PQ92771 950 aa25.24■■□□□ 1.63
CACNB3-208ENST00000548279 EDAQ92838 391 aa25.24■■□□□ 1.63
CACNB3-208ENST00000548279 ZNF707Q96C28 371 aaPredicted RBP25.24■■□□□ 1.63
CACNB3-208ENST00000548279 DNAJC19Q96DA6 116 aa25.24■■□□□ 1.63
CACNB3-208ENST00000548279 IKZF4Q9H2S9 585 aa25.24■■□□□ 1.63
CACNB3-208ENST00000548279 SLC38A7Q9NVC3 462 aa25.24■■□□□ 1.63
CACNB3-208ENST00000548279 TUBGCP4Q9UGJ1 667 aa25.24■■□□□ 1.63
CACNB3-208ENST00000548279 NR2E1Q9Y466 385 aa25.24■■□□□ 1.63
CACNB3-208ENST00000548279 TISP43B9A030 160 aa25.23■■□□□ 1.63
CACNB3-208ENST00000548279 PODXLO00592 558 aa25.23■■□□□ 1.63
CACNB3-208ENST00000548279 TXLNAP40222 546 aa25.23■■□□□ 1.63
CACNB3-208ENST00000548279 ZXDAP98168 799 aa25.23■■□□□ 1.63
CACNB3-208ENST00000548279 CREMQ03060 361 aa25.23■■□□□ 1.63
CACNB3-208ENST00000548279 FOXD4L6Q3SYB3 417 aaPredicted RBP25.23■■□□□ 1.63
CACNB3-208ENST00000548279 RSPO2Q6UXX9 243 aaPredicted RBP25.23■■□□□ 1.63
CACNB3-208ENST00000548279 FOXD4L3Q6VB84 417 aaPredicted RBP25.23■■□□□ 1.63
CACNB3-208ENST00000548279 C15orf39Q6ZRI6 1047 aa25.23■■□□□ 1.63
CACNB3-208ENST00000548279 MAP4K3Q8IVH8 894 aa25.23■■□□□ 1.63
CACNB3-208ENST00000548279 DDX27Q96GQ7 796 aaKnown RBP25.23■■□□□ 1.63
CACNB3-208ENST00000548279 TTC26A0AVF1 554 aa25.22■■□□□ 1.63
CACNB3-208ENST00000548279 ANKRD63C9JTQ0 380 aa25.22■■□□□ 1.63
CACNB3-208ENST00000548279 SPTLC2O15270 562 aa25.22■■□□□ 1.63
CACNB3-208ENST00000548279 ZSCAN22P10073 491 aaPredicted RBP25.22■■□□□ 1.63
CACNB3-208ENST00000548279 KREMEN2Q8NCW0 462 aa25.22■■□□□ 1.63
CACNB3-208ENST00000548279 PAPLNO95428 1278 aa25.21■■□□□ 1.63
CACNB3-208ENST00000548279 F13A1P00488 732 aa25.21■■□□□ 1.63
CACNB3-208ENST00000548279 HSP90AA1P07900 732 aaKnown RBP25.21■■□□□ 1.63
CACNB3-208ENST00000548279 CLTAP09496 248 aa25.21■■□□□ 1.63
CACNB3-208ENST00000548279 STAT6P42226 847 aa25.21■■□□□ 1.63
CACNB3-208ENST00000548279 PTPN21Q16825 1174 aa25.21■■□□□ 1.63
CACNB3-208ENST00000548279 CCDC73Q6ZRK6 1079 aa25.21■■□□□ 1.63
CACNB3-208ENST00000548279 CCDC149Q6ZUS6 474 aa25.21■■□□□ 1.63
CACNB3-208ENST00000548279 HFE2Q6ZVN8 426 aa25.21■■□□□ 1.63
CACNB3-208ENST00000548279 SV2BQ7L1I2 683 aa25.21■■□□□ 1.63
CACNB3-208ENST00000548279 PDILTQ8N807 584 aa25.21■■□□□ 1.63
CACNB3-208ENST00000548279 TDRD5Q8NAT2 981 aaKnown RBP25.21■■□□□ 1.63
CACNB3-208ENST00000548279 HDAC7Q8WUI4 952 aa25.21■■□□□ 1.63
CACNB3-208ENST00000548279 ZNF396Q96N95 335 aaPredicted RBP25.21■■□□□ 1.63
CACNB3-208ENST00000548279 ST6GALNAC4Q9H4F1 302 aa25.21■■□□□ 1.63
CACNB3-208ENST00000548279 PLEKHA4Q9H4M7 779 aa25.21■■□□□ 1.63
CACNB3-208ENST00000548279 MTRRQ9UBK8 725 aa25.21■■□□□ 1.63
CACNB3-208ENST00000548279 FBXW11Q9UKB1 542 aa25.21■■□□□ 1.63
CACNB3-208ENST00000548279 A0A0B4J269 797 aa25.2■■□□□ 1.62
CACNB3-208ENST00000548279 OGTO15294 1046 aa25.2■■□□□ 1.62
CACNB3-208ENST00000548279 PPP6R2O75170 966 aa25.2■■□□□ 1.62
CACNB3-208ENST00000548279 PPP1R37O75864 691 aa25.2■■□□□ 1.62
CACNB3-208ENST00000548279 C1RP00736 705 aa25.2■■□□□ 1.62
CACNB3-208ENST00000548279 SCP2P22307 547 aa25.2■■□□□ 1.62
CACNB3-208ENST00000548279 ENOX2Q16206 610 aaKnown RBP25.2■■□□□ 1.62
CACNB3-208ENST00000548279 ZNF720Q7Z2F6 126 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms