RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 FAM189A1O60320 539 aa14.45□□□□□ -0.1
PTCH1-215ENST00000547672 RTN2O75298 545 aa14.45□□□□□ -0.1
PTCH1-215ENST00000547672 CABYRO75952 493 aa14.45□□□□□ -0.1
PTCH1-215ENST00000547672 TMEM253P0C7T8 217 aa14.45□□□□□ -0.1
PTCH1-215ENST00000547672 EIF4BP23588 611 aaKnown RBP14.45□□□□□ -0.1
PTCH1-215ENST00000547672 CRYBB1P53674 252 aaPredicted RBP14.45□□□□□ -0.1
PTCH1-215ENST00000547672 YARSP54577 528 aaKnown RBP14.45□□□□□ -0.1
PTCH1-215ENST00000547672 CHMP4BP1P59074 171 aa14.45□□□□□ -0.1
PTCH1-215ENST00000547672 PURAQ00577 322 aaKnown RBP14.45□□□□□ -0.1
PTCH1-215ENST00000547672 TDRD10Q5VZ19 366 aaKnown RBP14.45□□□□□ -0.1
PTCH1-215ENST00000547672 CATSPER4Q7RTX7 472 aa14.45□□□□□ -0.1
PTCH1-215ENST00000547672 TRAPPC11Q7Z392 1133 aa14.45□□□□□ -0.1
PTCH1-215ENST00000547672 RHOT2Q8IXI1 618 aa14.45□□□□□ -0.1
PTCH1-215ENST00000547672 UBXN4Q92575 508 aa14.45□□□□□ -0.1
PTCH1-215ENST00000547672 FAM212AQ96EL1 285 aa14.45□□□□□ -0.1
PTCH1-215ENST00000547672 TRIM11Q96F44 468 aa14.45□□□□□ -0.1
PTCH1-215ENST00000547672 IRX2Q9BZI1 471 aaPredicted RBP14.45□□□□□ -0.1
PTCH1-215ENST00000547672 GPR88Q9GZN0 384 aa14.45□□□□□ -0.1
PTCH1-215ENST00000547672 CDT1Q9H211 546 aa14.45□□□□□ -0.1
PTCH1-215ENST00000547672 ADAMTS10Q9H324 1103 aa14.45□□□□□ -0.1
PTCH1-215ENST00000547672 ZSWIM8A7E2V4 1837 aa14.44□□□□□ -0.1
PTCH1-215ENST00000547672 DDX3XO00571 662 aaKnown RBP eCLIP14.44□□□□□ -0.1
PTCH1-215ENST00000547672 ADCY6O43306 1168 aa14.44□□□□□ -0.1
PTCH1-215ENST00000547672 LRRN2O75325 713 aa14.44□□□□□ -0.1
PTCH1-215ENST00000547672 STAG3L1P0CL83 205 aa14.44□□□□□ -0.1
PTCH1-215ENST00000547672 KRT5P13647 590 aa14.44□□□□□ -0.1
PTCH1-215ENST00000547672 DARSP14868 501 aaKnown RBP14.44□□□□□ -0.1
PTCH1-215ENST00000547672 ARF4P18085 180 aaPredicted RBP14.44□□□□□ -0.1
PTCH1-215ENST00000547672 GRM5P41594 1212 aa14.44□□□□□ -0.1
PTCH1-215ENST00000547672 NOP2P46087 812 aaKnown RBP14.44□□□□□ -0.1
PTCH1-215ENST00000547672 ADAM17P78536 824 aa14.44□□□□□ -0.1
PTCH1-215ENST00000547672 CDR2Q01850 454 aa14.44□□□□□ -0.1
PTCH1-215ENST00000547672 CUL2Q13617 745 aa14.44□□□□□ -0.1
PTCH1-215ENST00000547672 AMHR2Q16671 573 aa14.44□□□□□ -0.1
PTCH1-215ENST00000547672 SLC27A1Q6PCB7 646 aa14.44□□□□□ -0.1
PTCH1-215ENST00000547672 MTERF4Q7Z6M4 381 aaKnown RBP14.44□□□□□ -0.1
PTCH1-215ENST00000547672 GLYCTKQ8IVS8 523 aa14.44□□□□□ -0.1
PTCH1-215ENST00000547672 PXYLP1Q8TE99 480 aa14.44□□□□□ -0.1
PTCH1-215ENST00000547672 PDZD7Q9H5P4 517 aa14.44□□□□□ -0.1
PTCH1-215ENST00000547672 MINDY3Q9H8M7 445 aa14.44□□□□□ -0.1
PTCH1-215ENST00000547672 TOPORSQ9NS56 1045 aaPredicted RBP14.44□□□□□ -0.1
PTCH1-215ENST00000547672 SEPT11Q9NVA2 429 aaKnown RBP14.44□□□□□ -0.1
PTCH1-215ENST00000547672 C2CD2Q9Y426 696 aa14.44□□□□□ -0.1
PTCH1-215ENST00000547672 RCCD1A6NED2 376 aa14.43□□□□□ -0.1
PTCH1-215ENST00000547672 XPOTO43592 962 aaKnown RBP14.43□□□□□ -0.1
PTCH1-215ENST00000547672 TSPAN1O60635 241 aa14.43□□□□□ -0.1
PTCH1-215ENST00000547672 GPR32O75388 356 aa14.43□□□□□ -0.1
PTCH1-215ENST00000547672 ECM2O94769 699 aaPredicted RBP14.43□□□□□ -0.1
PTCH1-215ENST00000547672 CLSTN1O94985 981 aa14.43□□□□□ -0.1
PTCH1-215ENST00000547672 ASS1P00966 412 aaKnown RBP14.43□□□□□ -0.1
PTCH1-215ENST00000547672 HMGCRP04035 888 aa14.43□□□□□ -0.1
PTCH1-215ENST00000547672 GJB1P08034 283 aa14.43□□□□□ -0.1
PTCH1-215ENST00000547672 GPC5P78333 572 aa14.43□□□□□ -0.1
PTCH1-215ENST00000547672 TFAMQ00059 246 aaKnown RBP14.43□□□□□ -0.1
PTCH1-215ENST00000547672 PTPN11Q06124 597 aaPredicted RBP14.43□□□□□ -0.1
PTCH1-215ENST00000547672 TCEAL1Q15170 157 aa14.43□□□□□ -0.1
PTCH1-215ENST00000547672 CLUL1Q15846 466 aa14.43□□□□□ -0.1
PTCH1-215ENST00000547672 FAM43BQ6ZT52 329 aaPredicted RBP14.43□□□□□ -0.1
PTCH1-215ENST00000547672 HACE1Q8IYU2 909 aa14.43□□□□□ -0.1
PTCH1-215ENST00000547672 TATDN2Q93075 761 aa14.43□□□□□ -0.1
PTCH1-215ENST00000547672 KREMEN1Q96MU8 473 aa14.43□□□□□ -0.1
PTCH1-215ENST00000547672 SYT11Q9BT88 431 aa14.43□□□□□ -0.1
PTCH1-215ENST00000547672 SEZ6LQ9BYH1 1024 aa14.43□□□□□ -0.1
PTCH1-215ENST00000547672 FAM49AQ9H0Q0 323 aaPredicted RBP14.43□□□□□ -0.1
PTCH1-215ENST00000547672 ISCUQ9H1K1 167 aa14.43□□□□□ -0.1
PTCH1-215ENST00000547672 PDCL3Q9H2J4 239 aa14.43□□□□□ -0.1
PTCH1-215ENST00000547672 SRRDQ9UH36 339 aa14.43□□□□□ -0.1
PTCH1-215ENST00000547672 AJAP1Q9UKB5 411 aaPredicted RBP14.43□□□□□ -0.1
PTCH1-215ENST00000547672 NENFQ9UMX5 172 aa14.43□□□□□ -0.1
PTCH1-215ENST00000547672 CNTN6Q9UQ52 1028 aa14.43□□□□□ -0.1
PTCH1-215ENST00000547672 CASP8AP2Q9UKL3 1982 aa14.43□□□□□ -0.1
PTCH1-215ENST00000547672 CTAGE15A4D2H0 777 aa14.42□□□□□ -0.1
PTCH1-215ENST00000547672 GPR25O00155 361 aa14.42□□□□□ -0.1
PTCH1-215ENST00000547672 CYP26A1O43174 497 aa14.42□□□□□ -0.1
PTCH1-215ENST00000547672 B4GALT5O43286 388 aa14.42□□□□□ -0.1
PTCH1-215ENST00000547672 VNN1O95497 513 aa14.42□□□□□ -0.1
PTCH1-215ENST00000547672 EDN1P05305 212 aa14.42□□□□□ -0.1
PTCH1-215ENST00000547672 CTAGE8P0CG41 777 aa14.42□□□□□ -0.1
PTCH1-215ENST00000547672 MYBL1P10243 752 aa14.42□□□□□ -0.1
PTCH1-215ENST00000547672 CYP11B1P15538 503 aa14.42□□□□□ -0.1
PTCH1-215ENST00000547672 CST5P28325 142 aaPredicted RBP14.42□□□□□ -0.1
PTCH1-215ENST00000547672 HOXC8P31273 242 aa14.42□□□□□ -0.1
PTCH1-215ENST00000547672 PAFAH1B1P43034 410 aa14.42□□□□□ -0.1
PTCH1-215ENST00000547672 NOP14P78316 857 aaKnown RBP14.42□□□□□ -0.1
PTCH1-215ENST00000547672 BEX3Q00994 111 aa14.42□□□□□ -0.1
PTCH1-215ENST00000547672 PRKCZQ05513 592 aa14.42□□□□□ -0.1
PTCH1-215ENST00000547672 KIZQ2M2Z5 673 aa14.42□□□□□ -0.1
PTCH1-215ENST00000547672 CCDC70Q6NSX1 233 aa14.42□□□□□ -0.1
PTCH1-215ENST00000547672 RNF180Q86T96 592 aa14.42□□□□□ -0.1
PTCH1-215ENST00000547672 RPAINQ86UA6 219 aa14.42□□□□□ -0.1
PTCH1-215ENST00000547672 CTAGE6Q86UF2 777 aa14.42□□□□□ -0.1
PTCH1-215ENST00000547672 SESTD1Q86VW0 696 aa14.42□□□□□ -0.1
PTCH1-215ENST00000547672 CTAGE4Q8IX94 777 aa14.42□□□□□ -0.1
PTCH1-215ENST00000547672 RPUSD2Q8IZ73 545 aaKnown RBP14.42□□□□□ -0.1
PTCH1-215ENST00000547672 RFFLQ8WZ73 363 aa14.42□□□□□ -0.1
PTCH1-215ENST00000547672 TRIB2Q92519 343 aa14.42□□□□□ -0.1
PTCH1-215ENST00000547672 GOLGA1Q92805 767 aa14.42□□□□□ -0.1
PTCH1-215ENST00000547672 ZIC5Q96T25 663 aa14.42□□□□□ -0.1
PTCH1-215ENST00000547672 TRIM6Q9C030 488 aaPredicted RBP14.42□□□□□ -0.1
PTCH1-215ENST00000547672 NIF3L1Q9GZT8 377 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms