RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 ZNF598Q86UK7 904 aaKnown RBP17.12■□□□□ 0.33
TRAFD1-203ENST00000547063 RTN4RL1Q86UN2 441 aaPredicted RBP17.12■□□□□ 0.33
TRAFD1-203ENST00000547063 VSTM4Q8IW00 320 aa17.12■□□□□ 0.33
TRAFD1-203ENST00000547063 FBXL13Q8NEE6 735 aa17.12■□□□□ 0.33
TRAFD1-203ENST00000547063 KIF12Q96FN5 646 aa17.12■□□□□ 0.33
TRAFD1-203ENST00000547063 PCMTD1Q96MG8 357 aaPredicted RBP17.12■□□□□ 0.33
TRAFD1-203ENST00000547063 POP1Q99575 1024 aaKnown RBP17.12■□□□□ 0.33
TRAFD1-203ENST00000547063 NUP58Q9BVL2 599 aa17.12■□□□□ 0.33
TRAFD1-203ENST00000547063 TMEM117Q9H0C3 514 aa17.12■□□□□ 0.33
TRAFD1-203ENST00000547063 MMRN2Q9H8L6 949 aa17.12■□□□□ 0.33
TRAFD1-203ENST00000547063 IL23AQ9NPF7 189 aa17.12■□□□□ 0.33
TRAFD1-203ENST00000547063 SLC38A7Q9NVC3 462 aa17.12■□□□□ 0.33
TRAFD1-203ENST00000547063 LRFN2Q9ULH4 789 aa17.12■□□□□ 0.33
TRAFD1-203ENST00000547063 COQ4Q9Y3A0 265 aa17.12■□□□□ 0.33
TRAFD1-203ENST00000547063 R3HCC1Q9Y3T6 440 aaKnown RBP17.12■□□□□ 0.33
TRAFD1-203ENST00000547063 DAAM1Q9Y4D1 1078 aa17.12■□□□□ 0.33
TRAFD1-203ENST00000547063 ITIH6Q6UXX5 1313 aa17.12■□□□□ 0.33
TRAFD1-203ENST00000547063 BAIAP3O94812 1187 aa17.11■□□□□ 0.33
TRAFD1-203ENST00000547063 TPM1P09493 284 aa17.11■□□□□ 0.33
TRAFD1-203ENST00000547063 PBX1P40424 430 aa17.11■□□□□ 0.33
TRAFD1-203ENST00000547063 FPGSQ05932 587 aa17.11■□□□□ 0.33
TRAFD1-203ENST00000547063 SYCP1Q15431 976 aa17.11■□□□□ 0.33
TRAFD1-203ENST00000547063 CBWD6Q4V339 395 aa17.11■□□□□ 0.33
TRAFD1-203ENST00000547063 CBWD3Q5JTY5 395 aa17.11■□□□□ 0.33
TRAFD1-203ENST00000547063 CBWD5Q5RIA9 395 aa17.11■□□□□ 0.33
TRAFD1-203ENST00000547063 JADE1Q6IE81 842 aa17.11■□□□□ 0.33
TRAFD1-203ENST00000547063 GLB1LQ6UWU2 654 aa17.11■□□□□ 0.33
TRAFD1-203ENST00000547063 AGMOQ6ZNB7 445 aa17.11■□□□□ 0.33
TRAFD1-203ENST00000547063 C15orf39Q6ZRI6 1047 aa17.11■□□□□ 0.33
TRAFD1-203ENST00000547063 RNF169Q8NCN4 708 aa17.11■□□□□ 0.33
TRAFD1-203ENST00000547063 CCDC150Q8NCX0 1101 aa17.11■□□□□ 0.33
TRAFD1-203ENST00000547063 BEST2Q8NFU1 509 aa17.11■□□□□ 0.33
TRAFD1-203ENST00000547063 LINC01599Q8WXQ3 324 aa17.11■□□□□ 0.33
TRAFD1-203ENST00000547063 IMPG2Q9BZV3 1241 aa17.11■□□□□ 0.33
TRAFD1-203ENST00000547063 RNF39Q9H2S5 420 aa17.11■□□□□ 0.33
TRAFD1-203ENST00000547063 GCNT4Q9P109 453 aa17.11■□□□□ 0.33
TRAFD1-203ENST00000547063 UBQLN1Q9UMX0 589 aaKnown RBP17.11■□□□□ 0.33
TRAFD1-203ENST00000547063 PCDHB7Q9Y5E2 793 aa17.11■□□□□ 0.33
TRAFD1-203ENST00000547063 TET1Q8NFU7 2136 aa17.11■□□□□ 0.33
TRAFD1-203ENST00000547063 SMIM28A0A1B0GU29 152 aa17.1■□□□□ 0.33
TRAFD1-203ENST00000547063 INPPL1O15357 1258 aa17.1■□□□□ 0.33
TRAFD1-203ENST00000547063 ZC3H11AO75152 810 aaKnown RBP eCLIP17.1■□□□□ 0.33
TRAFD1-203ENST00000547063 C4BPAP04003 597 aaKnown RBP17.1■□□□□ 0.33
TRAFD1-203ENST00000547063 NFICP08651 508 aa17.1■□□□□ 0.33
TRAFD1-203ENST00000547063 ATF7P17544 494 aaPredicted RBP17.1■□□□□ 0.33
TRAFD1-203ENST00000547063 CYP3A5P20815 502 aa17.1■□□□□ 0.33
TRAFD1-203ENST00000547063 ITGB8P26012 769 aa17.1■□□□□ 0.33
TRAFD1-203ENST00000547063 WNT7BP56706 349 aa17.1■□□□□ 0.33
TRAFD1-203ENST00000547063 TRPC3Q13507 836 aa17.1■□□□□ 0.33
TRAFD1-203ENST00000547063 TRAPPC11Q7Z392 1133 aa17.1■□□□□ 0.33
TRAFD1-203ENST00000547063 NPAS4Q8IUM7 802 aa17.1■□□□□ 0.33
TRAFD1-203ENST00000547063 EFCAB13Q8IY85 973 aa17.1■□□□□ 0.33
TRAFD1-203ENST00000547063 ZNF516Q92618 1163 aa17.1■□□□□ 0.33
TRAFD1-203ENST00000547063 DPF3Q92784 378 aa17.1■□□□□ 0.33
TRAFD1-203ENST00000547063 FAM81BQ96LP2 452 aa17.1■□□□□ 0.33
TRAFD1-203ENST00000547063 MTMR12Q9C0I1 747 aa17.1■□□□□ 0.33
TRAFD1-203ENST00000547063 PLCB1Q9NQ66 1216 aa17.1■□□□□ 0.33
TRAFD1-203ENST00000547063 KLK14Q9P0G3 267 aa17.1■□□□□ 0.33
TRAFD1-203ENST00000547063 KANSL3Q9P2N6 904 aa17.1■□□□□ 0.33
TRAFD1-203ENST00000547063 IMPACTQ9P2X3 320 aa17.1■□□□□ 0.33
TRAFD1-203ENST00000547063 ITGA11Q9UKX5 1188 aa17.1■□□□□ 0.33
TRAFD1-203ENST00000547063 NR2E3Q9Y5X4 410 aa17.1■□□□□ 0.33
TRAFD1-203ENST00000547063 MICAL3Q7RTP6 2002 aa17.09■□□□□ 0.33
TRAFD1-203ENST00000547063 ARL5CA6NH57 179 aa17.09■□□□□ 0.33
TRAFD1-203ENST00000547063 THP07101 528 aa17.09■□□□□ 0.33
TRAFD1-203ENST00000547063 TRIM21P19474 475 aaKnown RBP17.09■□□□□ 0.33
TRAFD1-203ENST00000547063 RFX1P22670 979 aa17.09■□□□□ 0.33
TRAFD1-203ENST00000547063 MLH1P40692 756 aa17.09■□□□□ 0.33
TRAFD1-203ENST00000547063 PIK3CAP42336 1068 aa17.09■□□□□ 0.33
TRAFD1-203ENST00000547063 CCDC173Q0VFZ6 552 aa17.09■□□□□ 0.33
TRAFD1-203ENST00000547063 EPC2Q52LR7 807 aa17.09■□□□□ 0.33
TRAFD1-203ENST00000547063 FIGNQ5HY92 759 aa17.09■□□□□ 0.33
TRAFD1-203ENST00000547063 WDR44Q5JSH3 913 aa17.09■□□□□ 0.33
TRAFD1-203ENST00000547063 TDRD10Q5VZ19 366 aaKnown RBP17.09■□□□□ 0.33
TRAFD1-203ENST00000547063 LMBRD2Q68DH5 695 aaPredicted RBP17.09■□□□□ 0.33
TRAFD1-203ENST00000547063 PSRC1Q6PGN9 363 aaPredicted RBP17.09■□□□□ 0.33
TRAFD1-203ENST00000547063 PPFIBP1Q86W92 1011 aa17.09■□□□□ 0.33
TRAFD1-203ENST00000547063 ABI1Q8IZP0 508 aa17.09■□□□□ 0.33
TRAFD1-203ENST00000547063 EHBP1Q8NDI1 1231 aa17.09■□□□□ 0.33
TRAFD1-203ENST00000547063 NEK11Q8NG66 645 aa17.09■□□□□ 0.33
TRAFD1-203ENST00000547063 OR5B17Q8NGF7 314 aa17.09■□□□□ 0.33
TRAFD1-203ENST00000547063 URGCPQ8TCY9 931 aa17.09■□□□□ 0.33
TRAFD1-203ENST00000547063 TAF4BQ92750 862 aa17.09■□□□□ 0.33
TRAFD1-203ENST00000547063 GAD1Q99259 594 aa17.09■□□□□ 0.33
TRAFD1-203ENST00000547063 LBHD1Q9BQE6 289 aaPredicted RBP17.09■□□□□ 0.33
TRAFD1-203ENST00000547063 CRACR2AQ9BSW2 395 aa17.09■□□□□ 0.33
TRAFD1-203ENST00000547063 RAB20Q9NX57 234 aa17.09■□□□□ 0.33
TRAFD1-203ENST00000547063 SIK3Q9Y2K2 1263 aa17.09■□□□□ 0.33
TRAFD1-203ENST00000547063 PTPRJQ12913 1337 aa17.09■□□□□ 0.33
TRAFD1-203ENST00000547063 PDCD11Q14690 1871 aaKnown RBP17.09■□□□□ 0.33
TRAFD1-203ENST00000547063 TRIP11Q15643 1979 aa17.09■□□□□ 0.33
TRAFD1-203ENST00000547063 DNAH12Q6ZR08 3092 aa17.09■□□□□ 0.33
TRAFD1-203ENST00000547063 TTC3P53804 2025 aa17.08■□□□□ 0.33
TRAFD1-203ENST00000547063 MEFVO15553 781 aaPredicted RBP17.08■□□□□ 0.32
TRAFD1-203ENST00000547063 AMHP03971 560 aa17.08■□□□□ 0.32
TRAFD1-203ENST00000547063 PON1P27169 355 aa17.08■□□□□ 0.32
TRAFD1-203ENST00000547063 RBP5P82980 135 aa17.08■□□□□ 0.32
TRAFD1-203ENST00000547063 GRIK3Q13003 919 aa17.08■□□□□ 0.32
TRAFD1-203ENST00000547063 ZBTB6Q15916 424 aa17.08■□□□□ 0.32
TRAFD1-203ENST00000547063 TRIM65Q6PJ69 517 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms