RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 FGFR3P22607 806 aa15.76■□□□□ 0.11
COL2A1-209ENST00000546974 STRN3Q13033 797 aa15.76■□□□□ 0.11
COL2A1-209ENST00000546974 TMEM119Q4V9L6 283 aa15.76■□□□□ 0.11
COL2A1-209ENST00000546974 LARP1BQ659C4 914 aaKnown RBP15.76■□□□□ 0.11
COL2A1-209ENST00000546974 MPZL3Q6UWV2 235 aa15.76■□□□□ 0.11
COL2A1-209ENST00000546974 CD300LGQ6UXG3 332 aa15.76■□□□□ 0.11
COL2A1-209ENST00000546974 DDX27Q96GQ7 796 aaKnown RBP15.76■□□□□ 0.11
COL2A1-209ENST00000546974 ACAP3Q96P50 834 aa15.76■□□□□ 0.11
COL2A1-209ENST00000546974 MYADMQ96S97 322 aa15.76■□□□□ 0.11
COL2A1-209ENST00000546974 TCHPQ9BT92 498 aa15.76■□□□□ 0.11
COL2A1-209ENST00000546974 SLC38A7Q9NVC3 462 aa15.76■□□□□ 0.11
COL2A1-209ENST00000546974 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.76■□□□□ 0.11
COL2A1-209ENST00000546974 PDCD11Q14690 1871 aaKnown RBP15.76■□□□□ 0.11
COL2A1-209ENST00000546974 TOM1L1O75674 476 aa15.75■□□□□ 0.11
COL2A1-209ENST00000546974 HNRNPA1P09651 372 aaKnown RBP eCLIP15.75■□□□□ 0.11
COL2A1-209ENST00000546974 KCNE1P15382 129 aa15.75■□□□□ 0.11
COL2A1-209ENST00000546974 IGFBP6P24592 240 aaPredicted RBP15.75■□□□□ 0.11
COL2A1-209ENST00000546974 HOXA9P31269 272 aa15.75■□□□□ 0.11
COL2A1-209ENST00000546974 CLCN5P51795 746 aa15.75■□□□□ 0.11
COL2A1-209ENST00000546974 OSTNP61366 133 aa15.75■□□□□ 0.11
COL2A1-209ENST00000546974 RAD51AP2Q09MP3 1159 aa15.75■□□□□ 0.11
COL2A1-209ENST00000546974 RAB33AQ14088 237 aa15.75■□□□□ 0.11
COL2A1-209ENST00000546974 LIN9Q5TKA1 542 aa15.75■□□□□ 0.11
COL2A1-209ENST00000546974 ASTLQ6HA08 431 aaPredicted RBP15.75■□□□□ 0.11
COL2A1-209ENST00000546974 RTL10Q7L3V2 364 aa15.75■□□□□ 0.11
COL2A1-209ENST00000546974 TMEM161BQ8NDZ6 487 aa15.75■□□□□ 0.11
COL2A1-209ENST00000546974 SNX27Q96L92 541 aa15.75■□□□□ 0.11
COL2A1-209ENST00000546974 ZMAT2Q96NC0 199 aaKnown RBP15.75■□□□□ 0.11
COL2A1-209ENST00000546974 PLIN2Q99541 437 aa15.75■□□□□ 0.11
COL2A1-209ENST00000546974 MFSD1Q9H3U5 465 aa15.75■□□□□ 0.11
COL2A1-209ENST00000546974 GOLGA2P5Q9HBQ8 144 aa15.75■□□□□ 0.11
COL2A1-209ENST00000546974 MTRRQ9UBK8 725 aa15.75■□□□□ 0.11
COL2A1-209ENST00000546974 ADAM12O43184 909 aa15.74■□□□□ 0.11
COL2A1-209ENST00000546974 GALR2O43603 387 aaPredicted RBP15.74■□□□□ 0.11
COL2A1-209ENST00000546974 BMP15O95972 392 aa15.74■□□□□ 0.11
COL2A1-209ENST00000546974 C8AP07357 584 aa15.74■□□□□ 0.11
COL2A1-209ENST00000546974 MAPTP10636 758 aaKnown RBP15.74■□□□□ 0.11
COL2A1-209ENST00000546974 OR1D2P34982 312 aa15.74■□□□□ 0.11
COL2A1-209ENST00000546974 SOX4Q06945 474 aaPredicted RBP15.74■□□□□ 0.11
COL2A1-209ENST00000546974 UVSSAQ2YD98 709 aa15.74■□□□□ 0.11
COL2A1-209ENST00000546974 ARSHQ5FYA8 562 aa15.74■□□□□ 0.11
COL2A1-209ENST00000546974 PPM1LQ5SGD2 360 aa15.74■□□□□ 0.11
COL2A1-209ENST00000546974 ZPBP2Q6X784 338 aa15.74■□□□□ 0.11
COL2A1-209ENST00000546974 ANKS3Q6ZW76 656 aa15.74■□□□□ 0.11
COL2A1-209ENST00000546974 BRAPQ7Z569 592 aa15.74■□□□□ 0.11
COL2A1-209ENST00000546974 TMEM105Q8N8V8 129 aa15.74■□□□□ 0.11
COL2A1-209ENST00000546974 C3orf58Q8NDZ4 430 aa15.74■□□□□ 0.11
COL2A1-209ENST00000546974 KCNN1Q92952 543 aa15.74■□□□□ 0.11
COL2A1-209ENST00000546974 ZBTB45Q96K62 511 aaPredicted RBP15.74■□□□□ 0.11
COL2A1-209ENST00000546974 CNTN3Q9P232 1028 aa15.74■□□□□ 0.11
COL2A1-209ENST00000546974 LARSQ9P2J5 1176 aaKnown RBP15.74■□□□□ 0.11
COL2A1-209ENST00000546974 BACE2Q9Y5Z0 518 aa15.74■□□□□ 0.11
COL2A1-209ENST00000546974 ZFP37Q9Y6Q3 630 aaPredicted RBP15.74■□□□□ 0.11
COL2A1-209ENST00000546974 VPS13AQ96RL7 3174 aa15.73■□□□□ 0.11
COL2A1-209ENST00000546974 H0YCG3 227 aa15.73■□□□□ 0.11
COL2A1-209ENST00000546974 PODXLO00592 558 aa15.73■□□□□ 0.11
COL2A1-209ENST00000546974 POU2F2P09086 479 aa15.73■□□□□ 0.11
COL2A1-209ENST00000546974 LAMP2P13473 410 aa15.73■□□□□ 0.11
COL2A1-209ENST00000546974 TKTP29401 623 aaKnown RBP15.73■□□□□ 0.11
COL2A1-209ENST00000546974 RPL9P32969 192 aaKnown RBP15.73■□□□□ 0.11
COL2A1-209ENST00000546974 UBA7P41226 1012 aa15.73■□□□□ 0.11
COL2A1-209ENST00000546974 NOLC1Q14978 699 aaKnown RBP eCLIP15.73■□□□□ 0.11
COL2A1-209ENST00000546974 AXDND1Q5T1B0 1012 aaPredicted RBP15.73■□□□□ 0.11
COL2A1-209ENST00000546974 GET4Q7L5D6 327 aaPredicted RBP15.73■□□□□ 0.11
COL2A1-209ENST00000546974 GRASPQ7Z6J2 395 aaPredicted RBP15.73■□□□□ 0.11
COL2A1-209ENST00000546974 SLC44A3Q8N4M1 653 aa15.73■□□□□ 0.11
COL2A1-209ENST00000546974 RSAD2Q8WXG1 361 aa15.73■□□□□ 0.11
COL2A1-209ENST00000546974 CALML4Q96GE6 196 aa15.73■□□□□ 0.11
COL2A1-209ENST00000546974 FBXL21Q9UKT6 434 aa15.73■□□□□ 0.11
COL2A1-209ENST00000546974 ODF2LQ9ULJ1 636 aa15.73■□□□□ 0.11
COL2A1-209ENST00000546974 CDY1Q9Y6F8 540 aa15.73■□□□□ 0.11
COL2A1-209ENST00000546974 NOTCH4Q99466 2003 aa15.73■□□□□ 0.11
COL2A1-209ENST00000546974 NPHP3-ACAD11A0A0J9YXS1 232 aa15.72■□□□□ 0.11
COL2A1-209ENST00000546974 CLDN3O15551 220 aa15.72■□□□□ 0.11
COL2A1-209ENST00000546974 NARSO43776 548 aaKnown RBP15.72■□□□□ 0.11
COL2A1-209ENST00000546974 XYLBO75191 536 aa15.72■□□□□ 0.11
COL2A1-209ENST00000546974 HARSP12081 509 aaKnown RBP15.72■□□□□ 0.11
COL2A1-209ENST00000546974 SCP2P22307 547 aa15.72■□□□□ 0.11
COL2A1-209ENST00000546974 FSHRP23945 695 aa15.72■□□□□ 0.11
COL2A1-209ENST00000546974 LONP1P36776 959 aaKnown RBP15.72■□□□□ 0.11
COL2A1-209ENST00000546974 BRCC3P46736 316 aa15.72■□□□□ 0.11
COL2A1-209ENST00000546974 NCKAP1LP55160 1127 aa15.72■□□□□ 0.11
COL2A1-209ENST00000546974 MCL1Q07820 350 aa15.72■□□□□ 0.11
COL2A1-209ENST00000546974 CUL4AQ13619 759 aa15.72■□□□□ 0.11
COL2A1-209ENST00000546974 RSPO2Q6UXX9 243 aaPredicted RBP15.72■□□□□ 0.11
COL2A1-209ENST00000546974 PHOX2BQ99453 314 aa15.72■□□□□ 0.11
COL2A1-209ENST00000546974 ANKFY1Q9P2R3 1169 aa15.72■□□□□ 0.11
COL2A1-209ENST00000546974 WNT16Q9UBV4 365 aa15.72■□□□□ 0.11
COL2A1-209ENST00000546974 ANHXE9PGG2 379 aa15.71■□□□□ 0.11
COL2A1-209ENST00000546974 I3L4J1 428 aa15.71■□□□□ 0.11
COL2A1-209ENST00000546974 SYN3O14994 580 aa15.71■□□□□ 0.11
COL2A1-209ENST00000546974 CCL16O15467 120 aa15.71■□□□□ 0.11
COL2A1-209ENST00000546974 MEFVO15553 781 aaPredicted RBP15.71■□□□□ 0.11
COL2A1-209ENST00000546974 SRFP11831 508 aa15.71■□□□□ 0.11
COL2A1-209ENST00000546974 NPR3P17342 541 aa15.71■□□□□ 0.11
COL2A1-209ENST00000546974 CACNB1Q02641 598 aaPredicted RBP15.71■□□□□ 0.11
COL2A1-209ENST00000546974 SLC10A6Q3KNW5 377 aa15.71■□□□□ 0.11
COL2A1-209ENST00000546974 CWF19L1Q69YN2 538 aaKnown RBP15.71■□□□□ 0.11
COL2A1-209ENST00000546974 HAUS6Q7Z4H7 955 aa15.71■□□□□ 0.11
COL2A1-209ENST00000546974 FLCNQ8NFG4 579 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms