RNA–Protein interactions for RNA: ENST00000546603.5

CPNE8-204, Transcript of copine 8, humanhuman

TSL 3

Gene CPNE8, Length 1,036 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-204ENST00000546603 MTM1Q13496 603 aa7.58□□□□□ -1.2
CPNE8-204ENST00000546603 ATP2B3Q16720 1220 aa7.58□□□□□ -1.2
CPNE8-204ENST00000546603 PTPROQ16827 1216 aa7.58□□□□□ -1.2
CPNE8-204ENST00000546603 BEAN1Q3B7T3 259 aa7.58□□□□□ -1.2
CPNE8-204ENST00000546603 ZNF529Q6P280 563 aa7.58□□□□□ -1.2
CPNE8-204ENST00000546603 MRGPRGQ86SM5 289 aa7.58□□□□□ -1.2
CPNE8-204ENST00000546603 PNMA8AQ86V59 439 aaPredicted RBP7.58□□□□□ -1.2
CPNE8-204ENST00000546603 RHOT2Q8IXI1 618 aa7.58□□□□□ -1.2
CPNE8-204ENST00000546603 CHFRQ96EP1 664 aa7.58□□□□□ -1.2
CPNE8-204ENST00000546603 MLST8Q9BVC4 326 aa7.58□□□□□ -1.2
CPNE8-204ENST00000546603 SLC13A1Q9BZW2 595 aa7.58□□□□□ -1.2
CPNE8-204ENST00000546603 FPGT-TNNI3KV9GXZ4 949 aa7.58□□□□□ -1.2
CPNE8-204ENST00000546603 FZD9O00144 591 aa7.57□□□□□ -1.2
CPNE8-204ENST00000546603 ALAS1P13196 640 aa7.57□□□□□ -1.2
CPNE8-204ENST00000546603 ATP8B2P98198 1209 aa7.57□□□□□ -1.2
CPNE8-204ENST00000546603 PCBP2Q15366 365 aaKnown RBP eCLIP7.57□□□□□ -1.2
CPNE8-204ENST00000546603 LDLRAD3Q86YD5 345 aa7.57□□□□□ -1.2
CPNE8-204ENST00000546603 TEKT5Q96M29 485 aa7.57□□□□□ -1.2
CPNE8-204ENST00000546603 CEP89Q96ST8 783 aa7.57□□□□□ -1.2
CPNE8-204ENST00000546603 TEX101Q9BY14 249 aa7.57□□□□□ -1.2
CPNE8-204ENST00000546603 SLC23A1Q9UHI7 598 aa7.57□□□□□ -1.2
CPNE8-204ENST00000546603 A0A087X1B8 175 aa7.56□□□□□ -1.2
CPNE8-204ENST00000546603 CENPVL1A0A0U1RR11 272 aa7.56□□□□□ -1.2
CPNE8-204ENST00000546603 RAMP2O60895 175 aa7.56□□□□□ -1.2
CPNE8-204ENST00000546603 CCND1P24385 295 aa7.56□□□□□ -1.2
CPNE8-204ENST00000546603 PTPN21Q16825 1174 aa7.56□□□□□ -1.2
CPNE8-204ENST00000546603 EFCAB2Q5VUJ9 269 aa7.56□□□□□ -1.2
CPNE8-204ENST00000546603 TSHZ3Q63HK5 1081 aa7.56□□□□□ -1.2
CPNE8-204ENST00000546603 LAIR1Q6GTX8 287 aa7.56□□□□□ -1.2
CPNE8-204ENST00000546603 ARMC6Q6NXE6 501 aa7.56□□□□□ -1.2
CPNE8-204ENST00000546603 ARHGEF19Q8IW93 802 aa7.56□□□□□ -1.2
CPNE8-204ENST00000546603 RPUSD2Q8IZ73 545 aaKnown RBP7.56□□□□□ -1.2
CPNE8-204ENST00000546603 ZGPATQ8N5A5 531 aaKnown RBP7.56□□□□□ -1.2
CPNE8-204ENST00000546603 OR56A1Q8NGH5 318 aa7.56□□□□□ -1.2
CPNE8-204ENST00000546603 NEU1Q99519 415 aa7.56□□□□□ -1.2
CPNE8-204ENST00000546603 MYOCQ99972 504 aa7.56□□□□□ -1.2
CPNE8-204ENST00000546603 HOMER2Q9NSB8 354 aa7.56□□□□□ -1.2
CPNE8-204ENST00000546603 TDP1Q9NUW8 608 aa7.56□□□□□ -1.2
CPNE8-204ENST00000546603 KLHL11Q9NVR0 708 aa7.56□□□□□ -1.2
CPNE8-204ENST00000546603 DKK2Q9UBU2 259 aa7.56□□□□□ -1.2
CPNE8-204ENST00000546603 RUVBL1Q9Y265 456 aaKnown RBP7.56□□□□□ -1.2
CPNE8-204ENST00000546603 TNKSO95271 1327 aa7.55□□□□□ -1.2
CPNE8-204ENST00000546603 FOXN1O15353 648 aa7.55□□□□□ -1.2
CPNE8-204ENST00000546603 CTXN1P60606 82 aa7.55□□□□□ -1.2
CPNE8-204ENST00000546603 CDC42EP1Q00587 391 aa7.55□□□□□ -1.2
CPNE8-204ENST00000546603 CREMQ03060 361 aa7.55□□□□□ -1.2
CPNE8-204ENST00000546603 TAP1Q03518 808 aa7.55□□□□□ -1.2
CPNE8-204ENST00000546603 Q6ZPA2 131 aa7.55□□□□□ -1.2
CPNE8-204ENST00000546603 RSPH3Q86UC2 560 aa7.55□□□□□ -1.2
CPNE8-204ENST00000546603 CPEB3Q8NE35 698 aaKnown RBP7.55□□□□□ -1.2
CPNE8-204ENST00000546603 TTPALQ9BTX7 342 aa7.55□□□□□ -1.2
CPNE8-204ENST00000546603 IKZF4Q9H2S9 585 aa7.55□□□□□ -1.2
CPNE8-204ENST00000546603 SLITRK6Q9H5Y7 841 aa7.55□□□□□ -1.2
CPNE8-204ENST00000546603 IPPQ9Y573 584 aa7.55□□□□□ -1.2
CPNE8-204ENST00000546603 ANKRD62A6NC57 917 aa7.54□□□□□ -1.2
CPNE8-204ENST00000546603 SGTAO43765 313 aa7.54□□□□□ -1.2
CPNE8-204ENST00000546603 LPXNO60711 386 aa7.54□□□□□ -1.2
CPNE8-204ENST00000546603 CFIP05156 583 aa7.54□□□□□ -1.2
CPNE8-204ENST00000546603 KRT4P19013 534 aa7.54□□□□□ -1.2
CPNE8-204ENST00000546603 DDX6P26196 483 aaKnown RBP eCLIP7.54□□□□□ -1.2
CPNE8-204ENST00000546603 GUCY1B3Q02153 619 aa7.54□□□□□ -1.2
CPNE8-204ENST00000546603 KIF23Q02241 960 aaPredicted RBP7.54□□□□□ -1.2
CPNE8-204ENST00000546603 SPDYE7PQ495Y7 208 aa7.54□□□□□ -1.2
CPNE8-204ENST00000546603 DACT2Q5SW24 774 aa7.54□□□□□ -1.2
CPNE8-204ENST00000546603 PPP4R3AQ6IN85 833 aa7.54□□□□□ -1.2
CPNE8-204ENST00000546603 UBE3BQ7Z3V4 1068 aa7.54□□□□□ -1.2
CPNE8-204ENST00000546603 VRK3Q8IV63 474 aa7.54□□□□□ -1.2
CPNE8-204ENST00000546603 MAPKAPK5Q8IW41 473 aa7.54□□□□□ -1.2
CPNE8-204ENST00000546603 NLGN4YQ8NFZ3 816 aaPredicted RBP7.54□□□□□ -1.2
CPNE8-204ENST00000546603 COA7Q96BR5 231 aa7.54□□□□□ -1.2
CPNE8-204ENST00000546603 ASPSCR1Q9BZE9 553 aa7.54□□□□□ -1.2
CPNE8-204ENST00000546603 RNPEPQ9H4A4 650 aa7.54□□□□□ -1.2
CPNE8-204ENST00000546603 FBXO34Q9NWN3 711 aa7.54□□□□□ -1.2
CPNE8-204ENST00000546603 NOP58Q9Y2X3 529 aaKnown RBP7.54□□□□□ -1.2
CPNE8-204ENST00000546603 PCDHA13Q9Y5I0 950 aa7.54□□□□□ -1.2
CPNE8-204ENST00000546603 MARCH11A6NNE9 402 aa7.53□□□□□ -1.2
CPNE8-204ENST00000546603 HTRA2O43464 458 aaPredicted RBP7.53□□□□□ -1.2
CPNE8-204ENST00000546603 B3GALT2O43825 422 aa7.53□□□□□ -1.2
CPNE8-204ENST00000546603 RPLP2P05387 115 aaKnown RBP7.53□□□□□ -1.2
CPNE8-204ENST00000546603 GCSHP23434 173 aa7.53□□□□□ -1.2
CPNE8-204ENST00000546603 ADKP55263 362 aaKnown RBP7.53□□□□□ -1.2
CPNE8-204ENST00000546603 RESTQ13127 1097 aa7.53□□□□□ -1.2
CPNE8-204ENST00000546603 FITM2Q8N6M3 262 aa7.53□□□□□ -1.2
CPNE8-204ENST00000546603 TMX3Q96JJ7 454 aa7.53□□□□□ -1.2
CPNE8-204ENST00000546603 C11orf54Q9H0W9 315 aaPredicted RBP7.53□□□□□ -1.2
CPNE8-204ENST00000546603 SERHL2Q9H4I8 314 aa7.53□□□□□ -1.2
CPNE8-204ENST00000546603 CYP4F11Q9HBI6 524 aa7.53□□□□□ -1.2
CPNE8-204ENST00000546603 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.53□□□□□ -1.2
CPNE8-204ENST00000546603 LIMCH1Q9UPQ0 1083 aa7.53□□□□□ -1.2
CPNE8-204ENST00000546603 A0A1B0GTW7 788 aa7.52□□□□□ -1.21
CPNE8-204ENST00000546603 TCRBV7S2A1N4TA0A589 114 aa7.52□□□□□ -1.21
CPNE8-204ENST00000546603 CCDC154A6NI56 674 aa7.52□□□□□ -1.21
CPNE8-204ENST00000546603 CKBP12277 381 aa7.52□□□□□ -1.21
CPNE8-204ENST00000546603 TARDBPQ13148 414 aaKnown RBP eCLIP7.52□□□□□ -1.21
CPNE8-204ENST00000546603 SMAD5Q99717 465 aaKnown RBP7.52□□□□□ -1.21
CPNE8-204ENST00000546603 GSTO2Q9H4Y5 243 aa7.52□□□□□ -1.21
CPNE8-204ENST00000546603 ANKFY1Q9P2R3 1169 aa7.52□□□□□ -1.21
CPNE8-204ENST00000546603 MAP3K2Q9Y2U5 619 aa7.52□□□□□ -1.21
CPNE8-204ENST00000546603 NOX1Q9Y5S8 564 aa7.52□□□□□ -1.21
CPNE8-204ENST00000546603 COL4A3Q01955 1670 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms