RNA–Protein interactions for RNA: ENST00000545964.1

MDM1-215, Transcript of Mdm1 nuclear protein, humanhuman

TSL 2

Gene MDM1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-215ENST00000545964 KCNT2Q6UVM3 1135 aa4.54□□□□□ -1.68
MDM1-215ENST00000545964 LRRC55Q6ZSA7 311 aa4.54□□□□□ -1.68
MDM1-215ENST00000545964 SGMS1Q86VZ5 419 aa4.54□□□□□ -1.68
MDM1-215ENST00000545964 SKAP1Q86WV1 359 aa4.54□□□□□ -1.68
MDM1-215ENST00000545964 CCDC60Q8IWA6 550 aaPredicted RBP4.54□□□□□ -1.68
MDM1-215ENST00000545964 LRRC71Q8N4P6 559 aa4.54□□□□□ -1.68
MDM1-215ENST00000545964 FBXL6Q8N531 539 aa4.54□□□□□ -1.68
MDM1-215ENST00000545964 C12orf76Q8N812 135 aaPredicted RBP4.54□□□□□ -1.68
MDM1-215ENST00000545964 COLGALT1Q8NBJ5 622 aa4.54□□□□□ -1.68
MDM1-215ENST00000545964 VN1R2Q8NFZ6 395 aa4.54□□□□□ -1.68
MDM1-215ENST00000545964 TMEM40Q8WWA1 233 aa4.54□□□□□ -1.68
MDM1-215ENST00000545964 MRPS27Q92552 414 aaKnown RBP4.54□□□□□ -1.68
MDM1-215ENST00000545964 ATOH1Q92858 354 aaPredicted RBP4.54□□□□□ -1.68
MDM1-215ENST00000545964 SCLT1Q96NL6 688 aa4.54□□□□□ -1.68
MDM1-215ENST00000545964 CASD1Q96PB1 797 aa4.54□□□□□ -1.68
MDM1-215ENST00000545964 TCF25Q9BQ70 676 aa4.54□□□□□ -1.68
MDM1-215ENST00000545964 PHF7Q9BWX1 381 aaPredicted RBP4.54□□□□□ -1.68
MDM1-215ENST00000545964 GLT8D2Q9H1C3 349 aa4.54□□□□□ -1.68
MDM1-215ENST00000545964 KCNH6Q9H252 994 aa4.54□□□□□ -1.68
MDM1-215ENST00000545964 C6orf50Q9HD87 102 aa4.54□□□□□ -1.68
MDM1-215ENST00000545964 TLR9Q9NR96 1032 aa4.54□□□□□ -1.68
MDM1-215ENST00000545964 C1orf112Q9NSG2 853 aa4.54□□□□□ -1.68
MDM1-215ENST00000545964 TBC1D22BQ9NU19 505 aa4.54□□□□□ -1.68
MDM1-215ENST00000545964 FAM86C1Q9NVL1 165 aa4.54□□□□□ -1.68
MDM1-215ENST00000545964 TMEM161AQ9NX61 479 aa4.54□□□□□ -1.68
MDM1-215ENST00000545964 BARHL2Q9NY43 387 aa4.54□□□□□ -1.68
MDM1-215ENST00000545964 SPG21Q9NZD8 308 aa4.54□□□□□ -1.68
MDM1-215ENST00000545964 GABBR1Q9UBS5 961 aa4.54□□□□□ -1.68
MDM1-215ENST00000545964 SEPT3Q9UH03 358 aa4.54□□□□□ -1.68
MDM1-215ENST00000545964 PCDHA10Q9Y5I2 948 aa4.54□□□□□ -1.68
MDM1-215ENST00000545964 KCNMB2Q9Y691 235 aa4.54□□□□□ -1.68
MDM1-215ENST00000545964 PTPRSQ13332 1948 aa4.54□□□□□ -1.68
MDM1-215ENST00000545964 MYO7AQ13402 2215 aa4.53□□□□□ -1.68
MDM1-215ENST00000545964 KDM3AQ9Y4C1 1321 aa4.53□□□□□ -1.68
MDM1-215ENST00000545964 MUC6Q6W4X9 2439 aa4.53□□□□□ -1.68
MDM1-215ENST00000545964 CCDC196A0A1B0GTZ2 297 aa4.53□□□□□ -1.68
MDM1-215ENST00000545964 H0Y858 1186 aa4.53□□□□□ -1.68
MDM1-215ENST00000545964 ZBTB39O15060 712 aa4.53□□□□□ -1.68
MDM1-215ENST00000545964 MAGEB2O15479 319 aa4.53□□□□□ -1.68
MDM1-215ENST00000545964 CHMP2AO43633 222 aa4.53□□□□□ -1.68
MDM1-215ENST00000545964 GPR32O75388 356 aa4.53□□□□□ -1.68
MDM1-215ENST00000545964 C22orf31O95567 290 aa4.53□□□□□ -1.68
MDM1-215ENST00000545964 CYP3A4P08684 503 aa4.53□□□□□ -1.68
MDM1-215ENST00000545964 WEE2P0C1S8 567 aa4.53□□□□□ -1.68
MDM1-215ENST00000545964 SRGAP2BP0DMP2 458 aa4.53□□□□□ -1.68
MDM1-215ENST00000545964 LAG3P18627 525 aa4.53□□□□□ -1.68
MDM1-215ENST00000545964 EIF4BP23588 611 aaKnown RBP4.53□□□□□ -1.68
MDM1-215ENST00000545964 AVPR2P30518 371 aa4.53□□□□□ -1.68
MDM1-215ENST00000545964 SREBF1P36956 1147 aa4.53□□□□□ -1.68
MDM1-215ENST00000545964 SCNN1AP37088 669 aa4.53□□□□□ -1.68
MDM1-215ENST00000545964 ALDH7A1P49419 539 aaKnown RBP4.53□□□□□ -1.68
MDM1-215ENST00000545964 METAP2P50579 478 aaKnown RBP eCLIP4.53□□□□□ -1.68
MDM1-215ENST00000545964 CCT2P78371 535 aaKnown RBP4.53□□□□□ -1.68
MDM1-215ENST00000545964 UBE3AQ05086 875 aa4.53□□□□□ -1.68
MDM1-215ENST00000545964 SIGLEC14Q08ET2 396 aa4.53□□□□□ -1.68
MDM1-215ENST00000545964 DSC3Q14574 896 aa4.53□□□□□ -1.68
MDM1-215ENST00000545964 BMS1Q14692 1282 aaKnown RBP4.53□□□□□ -1.68
MDM1-215ENST00000545964 CBX2Q14781 532 aaPredicted RBP4.53□□□□□ -1.68
MDM1-215ENST00000545964 ADCK5Q3MIX3 580 aa4.53□□□□□ -1.68
MDM1-215ENST00000545964 PDE12Q6L8Q7 609 aaKnown RBP4.53□□□□□ -1.68
MDM1-215ENST00000545964 CES5AQ6NT32 575 aa4.53□□□□□ -1.68
MDM1-215ENST00000545964 ZNF746Q6NUN9 644 aaPredicted RBP4.53□□□□□ -1.68
MDM1-215ENST00000545964 ANKRD54Q6NXT1 300 aa4.53□□□□□ -1.68
MDM1-215ENST00000545964 SYCE2Q6PIF2 218 aa4.53□□□□□ -1.68
MDM1-215ENST00000545964 Q6ZUG5 572 aa4.53□□□□□ -1.68
MDM1-215ENST00000545964 NIPA1Q7RTP0 329 aa4.53□□□□□ -1.68
MDM1-215ENST00000545964 BMP8AQ7Z5Y6 402 aa4.53□□□□□ -1.68
MDM1-215ENST00000545964 FAM228AQ86W67 206 aa4.53□□□□□ -1.68
MDM1-215ENST00000545964 MRPL43Q8N983 215 aaKnown RBP4.53□□□□□ -1.68
MDM1-215ENST00000545964 SMRP1Q8NCR6 262 aa4.53□□□□□ -1.68
MDM1-215ENST00000545964 KREMEN2Q8NCW0 462 aa4.53□□□□□ -1.68
MDM1-215ENST00000545964 PRSS33Q8NF86 280 aa4.53□□□□□ -1.68
MDM1-215ENST00000545964 RASGRP4Q8TDF6 673 aa4.53□□□□□ -1.68
MDM1-215ENST00000545964 HELQQ8TDG4 1101 aa4.53□□□□□ -1.68
MDM1-215ENST00000545964 PHKBQ93100 1093 aa4.53□□□□□ -1.68
MDM1-215ENST00000545964 GJA10Q969M2 543 aa4.53□□□□□ -1.68
MDM1-215ENST00000545964 CCDC136Q96JN2 1154 aa4.53□□□□□ -1.68
MDM1-215ENST00000545964 ZNF558Q96NG5 402 aa4.53□□□□□ -1.68
MDM1-215ENST00000545964 MAP7D2Q96T17 732 aa4.53□□□□□ -1.68
MDM1-215ENST00000545964 CDCA3Q99618 268 aaPredicted RBP4.53□□□□□ -1.68
MDM1-215ENST00000545964 SH2D3AQ9BRG2 576 aa4.53□□□□□ -1.68
MDM1-215ENST00000545964 TMEM117Q9H0C3 514 aa4.53□□□□□ -1.68
MDM1-215ENST00000545964 S1PR5Q9H228 398 aa4.53□□□□□ -1.68
MDM1-215ENST00000545964 CWH43Q9H720 699 aa4.53□□□□□ -1.68
MDM1-215ENST00000545964 NGRNQ9NPE2 291 aaKnown RBP4.53□□□□□ -1.68
MDM1-215ENST00000545964 DISC1Q9NRI5 854 aa4.53□□□□□ -1.68
MDM1-215ENST00000545964 CDH22Q9UJ99 828 aa4.53□□□□□ -1.68
MDM1-215ENST00000545964 BRWD1Q9NSI6 2320 aa4.53□□□□□ -1.68
MDM1-215ENST00000545964 TANC1Q9C0D5 1861 aa4.53□□□□□ -1.68
MDM1-215ENST00000545964 ZFHX2Q9C0A1 2572 aaPredicted RBP4.53□□□□□ -1.68
MDM1-215ENST00000545964 COL1A2P08123 1366 aa4.53□□□□□ -1.69
MDM1-215ENST00000545964 MYH6P13533 1939 aa4.52□□□□□ -1.69
MDM1-215ENST00000545964 COL4A4P53420 1690 aaPredicted RBP4.52□□□□□ -1.69
MDM1-215ENST00000545964 IGLV3-22A0A075B6J6 115 aa4.52□□□□□ -1.69
MDM1-215ENST00000545964 hCG_1984214I3L0E3 225 aa4.52□□□□□ -1.69
MDM1-215ENST00000545964 FSCN2O14926 492 aa4.52□□□□□ -1.69
MDM1-215ENST00000545964 PRPF3O43395 683 aaKnown RBP4.52□□□□□ -1.69
MDM1-215ENST00000545964 GAS2O43903 313 aaKnown RBP4.52□□□□□ -1.69
MDM1-215ENST00000545964 GAS7O60861 476 aa4.52□□□□□ -1.69
MDM1-215ENST00000545964 MMP20O60882 483 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms