RNA–Protein interactions for RNA: ENST00000545964.1

MDM1-215, Transcript of Mdm1 nuclear protein, humanhuman

TSL 2

Gene MDM1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-215ENST00000545964 AEBP2Q6ZN18 517 aaPredicted RBP17.58■□□□□ 0.4
MDM1-215ENST00000545964 CHIC1Q5VXU3 224 aa16.74■□□□□ 0.27
MDM1-215ENST00000545964 SENP3Q9H4L4 574 aaPredicted RBP15.35■□□□□ 0.05
MDM1-215ENST00000545964 PHF23Q9BUL5 403 aaPredicted RBP14.97□□□□□ -0.01
MDM1-215ENST00000545964 FOXD1Q16676 465 aa14.17□□□□□ -0.14
MDM1-215ENST00000545964 POTEDQ86YR6 584 aa13.88□□□□□ -0.19
MDM1-215ENST00000545964 MSH5O43196 834 aa13.66□□□□□ -0.22
MDM1-215ENST00000545964 PIAS4Q8N2W9 510 aaPredicted RBP13.21□□□□□ -0.29
MDM1-215ENST00000545964 PLPPR3Q6T4P5 718 aa13.05□□□□□ -0.32
MDM1-215ENST00000545964 PPP6R1Q9UPN7 881 aa12.81□□□□□ -0.36
MDM1-215ENST00000545964 ADRA2BP18089 450 aa12.78□□□□□ -0.36
MDM1-215ENST00000545964 SCAF1Q9H7N4 1312 aaKnown RBP12.05□□□□□ -0.48
MDM1-215ENST00000545964 DMRT2Q9Y5R5 561 aa12.02□□□□□ -0.49
MDM1-215ENST00000545964 CACNB1Q02641 598 aaPredicted RBP11.92□□□□□ -0.5
MDM1-215ENST00000545964 MAPK8IP2Q13387 824 aaPredicted RBP11.83□□□□□ -0.52
MDM1-215ENST00000545964 DCAF8L1A6NGE4 600 aa11.55□□□□□ -0.56
MDM1-215ENST00000545964 RNF39Q9H2S5 420 aa11.49□□□□□ -0.57
MDM1-215ENST00000545964 HOXD11P31277 338 aaPredicted RBP11.43□□□□□ -0.58
MDM1-215ENST00000545964 C1QBPQ07021 282 aaKnown RBP11.42□□□□□ -0.58
MDM1-215ENST00000545964 DNAJC5BQ9UF47 199 aa11.3□□□□□ -0.6
MDM1-215ENST00000545964 PPP4R3CPQ6ZMV5 832 aa11.28□□□□□ -0.6
MDM1-215ENST00000545964 RNF216Q9NWF9 866 aaPredicted RBP11.27□□□□□ -0.61
MDM1-215ENST00000545964 CNKSR2Q8WXI2 1034 aa11.26□□□□□ -0.61
MDM1-215ENST00000545964 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.92□□□□□ -0.66
MDM1-215ENST00000545964 NCBP3Q53F19 620 aaKnown RBP10.91□□□□□ -0.66
MDM1-215ENST00000545964 POTEHQ6S545 545 aa10.85□□□□□ -0.67
MDM1-215ENST00000545964 CAPN15O75808 1086 aa10.59□□□□□ -0.71
MDM1-215ENST00000545964 DSG3P32926 999 aa10.58□□□□□ -0.72
MDM1-215ENST00000545964 APLP2Q06481 763 aa10.55□□□□□ -0.72
MDM1-215ENST00000545964 U3KPZ7 1027 aaPredicted RBP10.52□□□□□ -0.73
MDM1-215ENST00000545964 NPM3O75607 178 aaKnown RBP10.51□□□□□ -0.73
MDM1-215ENST00000545964 SPINK5Q9NQ38 1064 aaPredicted RBP10.45□□□□□ -0.74
MDM1-215ENST00000545964 ZNF219Q9P2Y4 722 aaPredicted RBP10.4□□□□□ -0.74
MDM1-215ENST00000545964 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.37□□□□□ -0.75
MDM1-215ENST00000545964 HNRNPUL2Q1KMD3 747 aaKnown RBP10.37□□□□□ -0.75
MDM1-215ENST00000545964 RBM42Q9BTD8 480 aaKnown RBP10.33□□□□□ -0.76
MDM1-215ENST00000545964 TRHP20396 242 aaPredicted RBP10.28□□□□□ -0.76
MDM1-215ENST00000545964 SAMD1Q6SPF0 538 aaPredicted RBP10.21□□□□□ -0.77
MDM1-215ENST00000545964 ABCB7O75027 752 aa10.19□□□□□ -0.78
MDM1-215ENST00000545964 CHRDL2Q6WN34 429 aa10.11□□□□□ -0.79
MDM1-215ENST00000545964 SLC4A2P04920 1241 aa10.09□□□□□ -0.79
MDM1-215ENST00000545964 SP7Q8TDD2 431 aaPredicted RBP9.98□□□□□ -0.81
MDM1-215ENST00000545964 AKT1S1Q96B36 256 aa9.92□□□□□ -0.82
MDM1-215ENST00000545964 POLA2Q14181 598 aa9.9□□□□□ -0.82
MDM1-215ENST00000545964 ZBTB12Q9Y330 459 aaPredicted RBP9.89□□□□□ -0.83
MDM1-215ENST00000545964 MYCNP04198 464 aaPredicted RBP9.87□□□□□ -0.83
MDM1-215ENST00000545964 NISCHQ9Y2I1 1504 aa9.86□□□□□ -0.83
MDM1-215ENST00000545964 KCNA4P22459 653 aa9.85□□□□□ -0.83
MDM1-215ENST00000545964 HAX1O00165 279 aa9.74□□□□□ -0.85
MDM1-215ENST00000545964 PIP4P2Q8N4L2 257 aa9.72□□□□□ -0.85
MDM1-215ENST00000545964 REM2Q8IYK8 340 aaPredicted RBP9.71□□□□□ -0.86
MDM1-215ENST00000545964 FXR2P51116 673 aaKnown RBP eCLIP9.64□□□□□ -0.87
MDM1-215ENST00000545964 PITPNM1O00562 1244 aa9.58□□□□□ -0.88
MDM1-215ENST00000545964 OSCARQ8IYS5 282 aa9.55□□□□□ -0.88
MDM1-215ENST00000545964 FOXD4L1Q9NU39 408 aa9.49□□□□□ -0.89
MDM1-215ENST00000545964 SPDYE2BA6NHP3 402 aa9.46□□□□□ -0.9
MDM1-215ENST00000545964 SPDYE6P0CI01 402 aa9.46□□□□□ -0.9
MDM1-215ENST00000545964 SPDYE2Q495Y8 402 aa9.46□□□□□ -0.9
MDM1-215ENST00000545964 ATF5Q9Y2D1 282 aaPredicted RBP9.41□□□□□ -0.9
MDM1-215ENST00000545964 FBLN2P98095 1184 aa9.4□□□□□ -0.9
MDM1-215ENST00000545964 SPDYE1Q8NFV5 336 aaPredicted RBP9.4□□□□□ -0.9
MDM1-215ENST00000545964 PRKAR2AP13861 404 aaKnown RBP9.38□□□□□ -0.91
MDM1-215ENST00000545964 EVX2Q03828 476 aa9.36□□□□□ -0.91
MDM1-215ENST00000545964 LHX8Q68G74 356 aa9.36□□□□□ -0.91
MDM1-215ENST00000545964 C19orf67A6NJJ6 358 aa9.35□□□□□ -0.91
MDM1-215ENST00000545964 ATXN8OSP0DMR3 200 aa9.35□□□□□ -0.91
MDM1-215ENST00000545964 SLC4A1APQ9BWU0 796 aaKnown RBP9.33□□□□□ -0.92
MDM1-215ENST00000545964 CLEC11AQ9Y240 323 aa9.32□□□□□ -0.92
MDM1-215ENST00000545964 CLCN6P51797 869 aa9.31□□□□□ -0.92
MDM1-215ENST00000545964 GABBR2O75899 941 aa9.29□□□□□ -0.92
MDM1-215ENST00000545964 ZNF692Q9BU19 519 aaPredicted RBP9.22□□□□□ -0.93
MDM1-215ENST00000545964 SSUH2Q9Y2M2 353 aa9.18□□□□□ -0.94
MDM1-215ENST00000545964 PRR29P0C7W0 189 aa9.16□□□□□ -0.94
MDM1-215ENST00000545964 PLSCR2Q9NRY7 297 aa9.09□□□□□ -0.95
MDM1-215ENST00000545964 CD44P16070 742 aaKnown RBP9.07□□□□□ -0.96
MDM1-215ENST00000545964 CHADLQ6NUI6 762 aa9.07□□□□□ -0.96
MDM1-215ENST00000545964 DCBLD2Q96PD2 775 aa9.06□□□□□ -0.96
MDM1-215ENST00000545964 PABPN1Q86U42 306 aaKnown RBP eCLIP9.01□□□□□ -0.97
MDM1-215ENST00000545964 MKRN4PQ13434 485 aaPredicted RBP9□□□□□ -0.97
MDM1-215ENST00000545964 FARP1Q9Y4F1 1045 aaPredicted RBP9□□□□□ -0.97
MDM1-215ENST00000545964 ABCC9O60706 1549 aa9□□□□□ -0.97
MDM1-215ENST00000545964 POTEIP0CG38 1075 aa8.97□□□□□ -0.97
MDM1-215ENST00000545964 ZBTB22O15209 634 aa8.95□□□□□ -0.98
MDM1-215ENST00000545964 ZNF579Q8NAF0 562 aaKnown RBP8.93□□□□□ -0.98
MDM1-215ENST00000545964 PCDH10Q9P2E7 1040 aa8.93□□□□□ -0.98
MDM1-215ENST00000545964 STAG3Q9UJ98 1225 aa8.89□□□□□ -0.99
MDM1-215ENST00000545964 PAK3O75914 559 aaPredicted RBP8.88□□□□□ -0.99
MDM1-215ENST00000545964 ZRANB1Q9UGI0 708 aa8.87□□□□□ -0.99
MDM1-215ENST00000545964 POTEMA6NI47 508 aa8.81□□□□□ -1
MDM1-215ENST00000545964 OTUD5Q96G74 571 aa8.79□□□□□ -1
MDM1-215ENST00000545964 MAMSTRQ6ZN01 415 aa8.78□□□□□ -1
MDM1-215ENST00000545964 POTEGQ6S5H5 508 aa8.77□□□□□ -1.01
MDM1-215ENST00000545964 NPM1P06748 294 aaKnown RBP eCLIP8.76□□□□□ -1.01
MDM1-215ENST00000545964 CCDC180Q9P1Z9 1646 aa8.76□□□□□ -1.01
MDM1-215ENST00000545964 GALR2O43603 387 aaPredicted RBP8.73□□□□□ -1.01
MDM1-215ENST00000545964 CREBZFQ9NS37 354 aa8.7□□□□□ -1.02
MDM1-215ENST00000545964 C7P10643 843 aa8.69□□□□□ -1.02
MDM1-215ENST00000545964 SLC39A7Q92504 469 aa8.69□□□□□ -1.02
MDM1-215ENST00000545964 SCUBE2Q9NQ36 999 aa8.65□□□□□ -1.02
MDM1-215ENST00000545964 POTEB2H3BUK9 544 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms