RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 VPS37CA5D8V6 355 aaPredicted RBP23.14■■□□□ 1.29
SCARB1-210ENST00000545493 SLC26A4O43511 780 aa23.14■■□□□ 1.29
SCARB1-210ENST00000545493 YARSP54577 528 aaKnown RBP23.14■■□□□ 1.29
SCARB1-210ENST00000545493 NCKAP1LP55160 1127 aa23.14■■□□□ 1.29
SCARB1-210ENST00000545493 NOLC1Q14978 699 aaKnown RBP eCLIP23.14■■□□□ 1.29
SCARB1-210ENST00000545493 SF3A1Q15459 793 aaKnown RBP23.14■■□□□ 1.29
SCARB1-210ENST00000545493 REEP2Q9BRK0 252 aa23.14■■□□□ 1.29
SCARB1-210ENST00000545493 CNTN3Q9P232 1028 aa23.14■■□□□ 1.29
SCARB1-210ENST00000545493 I3L4J1 428 aa23.13■■□□□ 1.29
SCARB1-210ENST00000545493 TOM1L1O75674 476 aa23.13■■□□□ 1.29
SCARB1-210ENST00000545493 ZMYND10O75800 440 aa23.13■■□□□ 1.29
SCARB1-210ENST00000545493 B3GAT3O94766 335 aa23.13■■□□□ 1.29
SCARB1-210ENST00000545493 BMP15O95972 392 aa23.13■■□□□ 1.29
SCARB1-210ENST00000545493 TKTP29401 623 aaKnown RBP23.13■■□□□ 1.29
SCARB1-210ENST00000545493 BRCC3P46736 316 aa23.13■■□□□ 1.29
SCARB1-210ENST00000545493 KARSQ15046 597 aaKnown RBP23.13■■□□□ 1.29
SCARB1-210ENST00000545493 DDX27Q96GQ7 796 aaKnown RBP23.13■■□□□ 1.29
SCARB1-210ENST00000545493 MYADMQ96S97 322 aa23.13■■□□□ 1.29
SCARB1-210ENST00000545493 PRKD2Q9BZL6 878 aa23.13■■□□□ 1.29
SCARB1-210ENST00000545493 MTRRQ9UBK8 725 aa23.13■■□□□ 1.29
SCARB1-210ENST00000545493 KCNE1P15382 129 aa23.12■■□□□ 1.29
SCARB1-210ENST00000545493 PLCG1P19174 1290 aa23.12■■□□□ 1.29
SCARB1-210ENST00000545493 UBA7P41226 1012 aa23.12■■□□□ 1.29
SCARB1-210ENST00000545493 STRN3Q13033 797 aa23.12■■□□□ 1.29
SCARB1-210ENST00000545493 SEZ6Q53EL9 994 aa23.12■■□□□ 1.29
SCARB1-210ENST00000545493 DCLRE1AQ6PJP8 1040 aa23.12■■□□□ 1.29
SCARB1-210ENST00000545493 RSPO2Q6UXX9 243 aaPredicted RBP23.12■■□□□ 1.29
SCARB1-210ENST00000545493 GPBP1Q86WP2 473 aa23.12■■□□□ 1.29
SCARB1-210ENST00000545493 STAMQ92783 540 aa23.12■■□□□ 1.29
SCARB1-210ENST00000545493 KCNN1Q92952 543 aa23.12■■□□□ 1.29
SCARB1-210ENST00000545493 ACAP3Q96P50 834 aa23.12■■□□□ 1.29
SCARB1-210ENST00000545493 HAPLN2Q9GZV7 340 aa23.12■■□□□ 1.29
SCARB1-210ENST00000545493 ODF2LQ9ULJ1 636 aa23.12■■□□□ 1.29
SCARB1-210ENST00000545493 PODXLO00592 558 aa23.11■■□□□ 1.29
SCARB1-210ENST00000545493 C8AP07357 584 aa23.11■■□□□ 1.29
SCARB1-210ENST00000545493 LONP1P36776 959 aaKnown RBP23.11■■□□□ 1.29
SCARB1-210ENST00000545493 SMTNP53814 917 aa23.11■■□□□ 1.29
SCARB1-210ENST00000545493 PDXDC1Q6P996 788 aa23.11■■□□□ 1.29
SCARB1-210ENST00000545493 ZPBP2Q6X784 338 aa23.11■■□□□ 1.29
SCARB1-210ENST00000545493 GET4Q7L5D6 327 aaPredicted RBP23.11■■□□□ 1.29
SCARB1-210ENST00000545493 RAD54LQ92698 747 aa23.11■■□□□ 1.29
SCARB1-210ENST00000545493 C18orf25Q96B23 403 aaPredicted RBP23.11■■□□□ 1.29
SCARB1-210ENST00000545493 CALML4Q96GE6 196 aa23.11■■□□□ 1.29
SCARB1-210ENST00000545493 TCHPQ9BT92 498 aa23.11■■□□□ 1.29
SCARB1-210ENST00000545493 KCNK12Q9HB15 430 aa23.11■■□□□ 1.29
SCARB1-210ENST00000545493 EPS15L1Q9UBC2 864 aa23.11■■□□□ 1.29
SCARB1-210ENST00000545493 DUSP12Q9UNI6 340 aa23.11■■□□□ 1.29
SCARB1-210ENST00000545493 DOCK6Q96HP0 2047 aa23.11■■□□□ 1.29
SCARB1-210ENST00000545493 GBP2P32456 591 aaPredicted RBP23.1■■□□□ 1.29
SCARB1-210ENST00000545493 ZNF131P52739 623 aa23.1■■□□□ 1.29
SCARB1-210ENST00000545493 MCL1Q07820 350 aa23.1■■□□□ 1.29
SCARB1-210ENST00000545493 TCF15Q12870 199 aa23.1■■□□□ 1.29
SCARB1-210ENST00000545493 RESTQ13127 1097 aa23.1■■□□□ 1.29
SCARB1-210ENST00000545493 PTPAQ15257 358 aa23.1■■□□□ 1.29
SCARB1-210ENST00000545493 LIN9Q5TKA1 542 aa23.1■■□□□ 1.29
SCARB1-210ENST00000545493 PIDD1Q9HB75 910 aa23.1■■□□□ 1.29
SCARB1-210ENST00000545493 SLC38A7Q9NVC3 462 aa23.1■■□□□ 1.29
SCARB1-210ENST00000545493 LARSQ9P2J5 1176 aaKnown RBP23.1■■□□□ 1.29
SCARB1-210ENST00000545493 CDY1Q9Y6F8 540 aa23.1■■□□□ 1.29
SCARB1-210ENST00000545493 PIEZO1Q92508 2521 aa23.09■■□□□ 1.29
SCARB1-210ENST00000545493 CXCL8P10145 99 aa23.09■■□□□ 1.29
SCARB1-210ENST00000545493 TDGQ13569 410 aa23.09■■□□□ 1.29
SCARB1-210ENST00000545493 DHX8Q14562 1220 aaKnown RBP23.09■■□□□ 1.29
SCARB1-210ENST00000545493 MCM6Q14566 821 aa23.09■■□□□ 1.29
SCARB1-210ENST00000545493 SLC10A6Q3KNW5 377 aa23.09■■□□□ 1.29
SCARB1-210ENST00000545493 TMEM130Q8N3G9 435 aa23.09■■□□□ 1.29
SCARB1-210ENST00000545493 TUBGCP4Q9UGJ1 667 aa23.09■■□□□ 1.29
SCARB1-210ENST00000545493 KCNG1Q9UIX4 513 aa23.09■■□□□ 1.29
SCARB1-210ENST00000545493 CLIC4Q9Y696 253 aa23.09■■□□□ 1.29
SCARB1-210ENST00000545493 MYH15Q9Y2K3 1946 aa23.09■■□□□ 1.29
SCARB1-210ENST00000545493 K7ENM7 598 aa23.08■■□□□ 1.29
SCARB1-210ENST00000545493 NARSO43776 548 aaKnown RBP23.08■■□□□ 1.29
SCARB1-210ENST00000545493 AVPR2P30518 371 aa23.08■■□□□ 1.29
SCARB1-210ENST00000545493 HOXA9P31269 272 aa23.08■■□□□ 1.29
SCARB1-210ENST00000545493 RAB33AQ14088 237 aa23.08■■□□□ 1.29
SCARB1-210ENST00000545493 HAUS6Q7Z4H7 955 aa23.08■■□□□ 1.29
SCARB1-210ENST00000545493 SLC7A14Q8TBB6 771 aa23.08■■□□□ 1.29
SCARB1-210ENST00000545493 RSAD2Q8WXG1 361 aa23.08■■□□□ 1.29
SCARB1-210ENST00000545493 FIZ1Q96SL8 496 aa23.08■■□□□ 1.29
SCARB1-210ENST00000545493 BACH2Q9BYV9 841 aa23.08■■□□□ 1.29
SCARB1-210ENST00000545493 IGSF9Q9P2J2 1179 aa23.08■■□□□ 1.29
SCARB1-210ENST00000545493 BACE2Q9Y5Z0 518 aa23.08■■□□□ 1.29
SCARB1-210ENST00000545493 H0YCG3 227 aa23.07■■□□□ 1.28
SCARB1-210ENST00000545493 FAM189A1O60320 539 aa23.07■■□□□ 1.28
SCARB1-210ENST00000545493 HNRNPA1P09651 372 aaKnown RBP eCLIP23.07■■□□□ 1.28
SCARB1-210ENST00000545493 PDCP20941 246 aa23.07■■□□□ 1.28
SCARB1-210ENST00000545493 SYT1P21579 422 aa23.07■■□□□ 1.28
SCARB1-210ENST00000545493 OR1D2P34982 312 aa23.07■■□□□ 1.28
SCARB1-210ENST00000545493 PPM1LQ5SGD2 360 aa23.07■■□□□ 1.28
SCARB1-210ENST00000545493 CWF19L1Q69YN2 538 aaKnown RBP23.07■■□□□ 1.28
SCARB1-210ENST00000545493 FAM173BQ6P4H8 233 aa23.07■■□□□ 1.28
SCARB1-210ENST00000545493 USP49Q70CQ1 688 aa23.07■■□□□ 1.28
SCARB1-210ENST00000545493 TMEM105Q8N8V8 129 aa23.07■■□□□ 1.28
SCARB1-210ENST00000545493 RASSF8Q8NHQ8 419 aa23.07■■□□□ 1.28
SCARB1-210ENST00000545493 LARP4BQ92615 738 aaKnown RBP23.07■■□□□ 1.28
SCARB1-210ENST00000545493 BICD1Q96G01 975 aa23.07■■□□□ 1.28
SCARB1-210ENST00000545493 PARVGQ9HBI0 331 aa23.07■■□□□ 1.28
SCARB1-210ENST00000545493 FBXO2Q9UK22 296 aaPredicted RBP23.07■■□□□ 1.28
SCARB1-210ENST00000545493 NOTCH4Q99466 2003 aa23.06■■□□□ 1.28
SCARB1-210ENST00000545493 CCL16O15467 120 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms