RNA–Protein interactions for RNA: ENST00000545250.5

TSC1-208, Transcript of TSC complex subunit 1, humanhuman

TSL 5 BASIC

Gene TSC1, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-208ENST00000545250 IGSF3O75054 1194 aa9.6□□□□□ -0.87
TSC1-208ENST00000545250 EIF4A1P60842 406 aaKnown RBP9.6□□□□□ -0.87
TSC1-208ENST00000545250 MAN2A1Q16706 1144 aa9.6□□□□□ -0.87
TSC1-208ENST00000545250 SGSM1Q2NKQ1 1148 aa9.6□□□□□ -0.87
TSC1-208ENST00000545250 PACS1Q6VY07 963 aa9.6□□□□□ -0.87
TSC1-208ENST00000545250 TSPAN14Q8NG11 270 aa9.6□□□□□ -0.87
TSC1-208ENST00000545250 UBE2OQ9C0C9 1292 aaKnown RBP9.6□□□□□ -0.87
TSC1-208ENST00000545250 FBXO40Q9UH90 709 aa9.6□□□□□ -0.87
TSC1-208ENST00000545250 PPP2R2CQ9Y2T4 447 aa9.6□□□□□ -0.87
TSC1-208ENST00000545250 PRRG1O14668 218 aa9.6□□□□□ -0.87
TSC1-208ENST00000545250 CMA1P23946 247 aa9.6□□□□□ -0.87
TSC1-208ENST00000545250 CTDSPL2Q05D32 466 aa9.6□□□□□ -0.87
TSC1-208ENST00000545250 RBBP4Q09028 425 aa9.6□□□□□ -0.87
TSC1-208ENST00000545250 CAMK2GQ13555 558 aaPredicted RBP9.6□□□□□ -0.87
TSC1-208ENST00000545250 PYHIN1Q6K0P9 492 aa9.6□□□□□ -0.87
TSC1-208ENST00000545250 COMMD9Q9P000 198 aa9.6□□□□□ -0.87
TSC1-208ENST00000545250 ZNF112Q9UJU3 913 aa9.6□□□□□ -0.87
TSC1-208ENST00000545250 EMILIN1Q9Y6C2 1016 aa9.6□□□□□ -0.87
TSC1-208ENST00000545250 SGSM2O43147 1006 aa9.59□□□□□ -0.87
TSC1-208ENST00000545250 RGS20O76081 388 aa9.59□□□□□ -0.87
TSC1-208ENST00000545250 GRIK1P39086 918 aa9.59□□□□□ -0.87
TSC1-208ENST00000545250 CBX5P45973 191 aa9.59□□□□□ -0.87
TSC1-208ENST00000545250 GPC3P51654 580 aa9.59□□□□□ -0.87
TSC1-208ENST00000545250 ZNF507Q8TCN5 953 aa9.59□□□□□ -0.87
TSC1-208ENST00000545250 SERPINB12Q96P63 405 aa9.59□□□□□ -0.87
TSC1-208ENST00000545250 MYBL1P10243 752 aa9.59□□□□□ -0.87
TSC1-208ENST00000545250 PPP2R1BP30154 601 aa9.59□□□□□ -0.87
TSC1-208ENST00000545250 ITGA1P56199 1179 aa9.59□□□□□ -0.87
TSC1-208ENST00000545250 OSTNP61366 133 aa9.59□□□□□ -0.87
TSC1-208ENST00000545250 UBXN2AP68543 259 aa9.59□□□□□ -0.87
TSC1-208ENST00000545250 CYP4A11Q02928 519 aa9.59□□□□□ -0.87
TSC1-208ENST00000545250 MAPK6Q16659 721 aa9.59□□□□□ -0.87
TSC1-208ENST00000545250 KIZQ2M2Z5 673 aa9.59□□□□□ -0.87
TSC1-208ENST00000545250 CYP4A22Q5TCH4 519 aa9.59□□□□□ -0.87
TSC1-208ENST00000545250 MSANTD1Q6ZTZ1 278 aa9.59□□□□□ -0.87
TSC1-208ENST00000545250 SHCBP1Q8NEM2 672 aa9.59□□□□□ -0.87
TSC1-208ENST00000545250 RAET1EQ8TD07 263 aa9.59□□□□□ -0.87
TSC1-208ENST00000545250 NCOA1Q15788 1441 aa9.59□□□□□ -0.87
TSC1-208ENST00000545250 CASKIN1Q8WXD9 1431 aa9.59□□□□□ -0.87
TSC1-208ENST00000545250 A8MXQ7 604 aa9.59□□□□□ -0.87
TSC1-208ENST00000545250 RXRGP48443 463 aa9.59□□□□□ -0.87
TSC1-208ENST00000545250 HSPA13P48723 471 aa9.59□□□□□ -0.87
TSC1-208ENST00000545250 BTN3A2P78410 334 aa9.59□□□□□ -0.87
TSC1-208ENST00000545250 NFIAQ12857 509 aa9.59□□□□□ -0.87
TSC1-208ENST00000545250 SMCO1Q147U7 214 aa9.59□□□□□ -0.87
TSC1-208ENST00000545250 STAG2Q8N3U4 1231 aa9.59□□□□□ -0.87
TSC1-208ENST00000545250 KRT35Q92764 455 aa9.59□□□□□ -0.87
TSC1-208ENST00000545250 CAPN10Q9HC96 672 aa9.59□□□□□ -0.87
TSC1-208ENST00000545250 PARD3Q8TEW0 1356 aa9.59□□□□□ -0.87
TSC1-208ENST00000545250 PDHA1P08559 390 aa9.59□□□□□ -0.87
TSC1-208ENST00000545250 NOS3P29474 1203 aa9.59□□□□□ -0.87
TSC1-208ENST00000545250 TYK2P29597 1187 aa9.59□□□□□ -0.87
TSC1-208ENST00000545250 NFIL3Q16649 462 aa9.59□□□□□ -0.87
TSC1-208ENST00000545250 HIBCHQ6NVY1 386 aaPredicted RBP9.59□□□□□ -0.87
TSC1-208ENST00000545250 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.59□□□□□ -0.87
TSC1-208ENST00000545250 TRPV3Q8NET8 790 aa9.59□□□□□ -0.87
TSC1-208ENST00000545250 SLC20A1Q8WUM9 679 aa9.59□□□□□ -0.87
TSC1-208ENST00000545250 VPS35Q96QK1 796 aa9.59□□□□□ -0.87
TSC1-208ENST00000545250 CNPPD1Q9BV87 410 aa9.59□□□□□ -0.87
TSC1-208ENST00000545250 FAM49AQ9H0Q0 323 aaPredicted RBP9.59□□□□□ -0.87
TSC1-208ENST00000545250 MED23Q9ULK4 1368 aa9.59□□□□□ -0.87
TSC1-208ENST00000545250 MEI4A8MW99 385 aa9.59□□□□□ -0.87
TSC1-208ENST00000545250 GPC1P35052 558 aa9.59□□□□□ -0.87
TSC1-208ENST00000545250 MTTPP55157 894 aa9.59□□□□□ -0.87
TSC1-208ENST00000545250 RBM6P78332 1123 aaKnown RBP9.59□□□□□ -0.87
TSC1-208ENST00000545250 FKBP3Q00688 224 aaKnown RBP9.59□□□□□ -0.87
TSC1-208ENST00000545250 SLC39A6Q13433 755 aa9.59□□□□□ -0.87
TSC1-208ENST00000545250 SLFNL1Q499Z3 407 aa9.59□□□□□ -0.87
TSC1-208ENST00000545250 TNNI3KQ59H18 835 aa9.59□□□□□ -0.87
TSC1-208ENST00000545250 BEND6Q5SZJ8 279 aaPredicted RBP9.59□□□□□ -0.87
TSC1-208ENST00000545250 IZUMO1Q8IYV9 350 aa9.59□□□□□ -0.87
TSC1-208ENST00000545250 LRRC47Q8N1G4 583 aaKnown RBP9.59□□□□□ -0.87
TSC1-208ENST00000545250 WWP1Q9H0M0 922 aa9.59□□□□□ -0.87
TSC1-208ENST00000545250 RMND5AQ9H871 391 aa9.59□□□□□ -0.87
TSC1-208ENST00000545250 PPIEQ9UNP9 301 aaKnown RBP9.59□□□□□ -0.87
TSC1-208ENST00000545250 STX11O75558 287 aa9.59□□□□□ -0.87
TSC1-208ENST00000545250 SRP72O76094 671 aaKnown RBP9.59□□□□□ -0.87
TSC1-208ENST00000545250 ACSL3O95573 720 aa9.59□□□□□ -0.87
TSC1-208ENST00000545250 RPS6KA3P51812 740 aa9.59□□□□□ -0.87
TSC1-208ENST00000545250 IL2P60568 153 aa9.59□□□□□ -0.87
TSC1-208ENST00000545250 RHAGQ02094 409 aa9.59□□□□□ -0.87
TSC1-208ENST00000545250 CYP27A1Q02318 531 aa9.59□□□□□ -0.87
TSC1-208ENST00000545250 EIF2S3LQ2VIR3 472 aaKnown RBP9.59□□□□□ -0.87
TSC1-208ENST00000545250 GPIHBP1Q8IV16 184 aa9.59□□□□□ -0.87
TSC1-208ENST00000545250 PGBD4Q96DM1 585 aa9.59□□□□□ -0.87
TSC1-208ENST00000545250 AHCYL2Q96HN2 611 aaKnown RBP9.59□□□□□ -0.87
TSC1-208ENST00000545250 CCDC188H7C350 402 aa9.58□□□□□ -0.88
TSC1-208ENST00000545250 CLDN3O15551 220 aa9.58□□□□□ -0.88
TSC1-208ENST00000545250 TSC22D2O75157 780 aa9.58□□□□□ -0.88
TSC1-208ENST00000545250 CSNK2BP67870 215 aa9.58□□□□□ -0.88
TSC1-208ENST00000545250 SETD3Q86TU7 594 aaPredicted RBP9.58□□□□□ -0.88
TSC1-208ENST00000545250 PNMA1Q8ND90 353 aa9.58□□□□□ -0.88
TSC1-208ENST00000545250 HPS4Q9NQG7 708 aa9.58□□□□□ -0.88
TSC1-208ENST00000545250 ATPIF1Q9UII2 106 aa9.58□□□□□ -0.88
TSC1-208ENST00000545250 APOL1O14791 398 aa9.58□□□□□ -0.88
TSC1-208ENST00000545250 SCGNO76038 276 aa9.58□□□□□ -0.88
TSC1-208ENST00000545250 ALBP02768 609 aa9.58□□□□□ -0.88
TSC1-208ENST00000545250 TOMM20Q15388 145 aa9.58□□□□□ -0.88
TSC1-208ENST00000545250 LRRC8DQ7L1W4 858 aa9.58□□□□□ -0.88
TSC1-208ENST00000545250 TFB1MQ8WVM0 346 aaKnown RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms