RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 ARPC4-TTLL3A0A0A6YYG9 625 aa7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 H3BRB1 525 aa7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 LRG1P02750 347 aa7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 CLTAP09496 248 aa7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 DSG3P32926 999 aa7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 RASSF2P50749 326 aa7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 APBA1Q02410 837 aa7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 TAP1Q03518 808 aa7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 DCAF4L1Q3SXM0 396 aa7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 ITPRIPL1Q6GPH6 555 aa7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 DDX53Q86TM3 631 aaKnown RBP7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 C18orf8Q96DM3 657 aa7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 VCXQ9H320 206 aa7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 TUT1Q9H6E5 874 aaKnown RBP7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 CYP26B1Q9NR63 512 aa7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 C2CD2LO14523 706 aa7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 MT-ND3P03897 115 aa7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 AKR1A1P14550 325 aa7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 CYP11B2P19099 503 aa7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 PNPLA4P41247 253 aa7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 DNERQ8NFT8 737 aa7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 DEPDC1BQ8WUY9 529 aa7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 RNF25Q96BH1 459 aaPredicted RBP7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 CFAP36Q96G28 342 aa7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 NT5C1AQ9BXI3 368 aa7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 PLEKHA5Q9HAU0 1116 aa7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 UBQLN1Q9UMX0 589 aaKnown RBP7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 MSH4O15457 936 aa7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 B3GAT3O94766 335 aa7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 KRT3P12035 628 aa7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 MDM2Q00987 491 aaPredicted RBP7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 NOGQ13253 232 aa7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 DRP2Q13474 957 aa7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 GRAMD1BQ3KR37 738 aa7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 MMEL1Q495T6 779 aa7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 TRIM42Q8IWZ5 723 aa7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 HVCN1Q96D96 273 aa7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 MED15Q96RN5 788 aa7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 ABHD16BQ9H3Z7 469 aa7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 NR2E3Q9Y5X4 410 aa7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 GOLGA8QA0A0J9YX86 632 aa7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 GOLGA8OA6NCC3 632 aa7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 GOLGA8NF8WBI6 632 aa7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 TAF6P49848 677 aa7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 CLCN3P51790 818 aa7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 FKBP1AP62942 108 aaKnown RBP7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 ARHGAP15Q53QZ3 475 aa7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 CHADLQ6NUI6 762 aa7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 MIPOL1Q8TD10 442 aa7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 HPS3Q969F9 1004 aa7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 MTMR8Q96EF0 704 aa7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 POLR3CQ9BUI4 534 aaPredicted RBP7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 IDI2Q9BXS1 227 aa7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 ASCC2Q9H1I8 757 aaPredicted RBP7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 PARVAQ9NVD7 372 aa7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 EXOC1LA0A1B0GW35 172 aa7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 CCDC188H7C350 402 aa7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 NFIBO00712 420 aa7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 PQBP1O60828 265 aaKnown RBP7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 CYP2C8P10632 490 aa7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 FXR2P51116 673 aaKnown RBP eCLIP7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 CDH6P55285 790 aa7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 TAF1BQ53T94 588 aaPredicted RBP7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 METTL7BQ6UX53 244 aa7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 C7orf25Q9BPX7 421 aa7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 PDCD2LQ9BRP1 358 aa7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 ABHD10Q9NUJ1 306 aa7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 WDR35Q9P2L0 1181 aa7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 NWD1Q149M9 1564 aa7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 POM121CA8CG34 1229 aa7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 GOLGA8KD6RF30 607 aa7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 CYP26A1O43174 497 aa7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 SRGAP2O75044 1071 aa7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 HMBSP08397 361 aa7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 ZFXP17010 805 aaPredicted RBP7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 EPHB4P54760 987 aa7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 IL9RQ01113 521 aa7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 DHX9Q08211 1270 aaKnown RBP7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 SLC12A1Q13621 1099 aa7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 MAPRE1Q15691 268 aaKnown RBP7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 KIZQ2M2Z5 673 aa7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 ANKRD40Q6AI12 368 aa7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 CDR2LQ86X02 465 aaPredicted RBP7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 RHOT1Q8IXI2 618 aa7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 CACNA2D3Q8IZS8 1091 aa7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 SHCBP1Q8NEM2 672 aa7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 RMDN1Q96DB5 314 aa7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 XPNPEP3Q9NQH7 507 aa7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 PLSCR2Q9NRY7 297 aa7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 RRP15Q9Y3B9 282 aaKnown RBP7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 PITPNM2Q9BZ72 1349 aa7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 VWDEQ8N2E2 1590 aa7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 MYMKA6NI61 221 aa7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 FOXN1O15353 648 aa7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 MSL3P1P0C860 447 aa7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 TGFB3P10600 412 aa7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 CHRM1P11229 460 aaPredicted RBP7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 KLRC1P26715 233 aa7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 RGS7P49802 495 aa7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 TPI1P60174 286 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms