RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 REEP2Q9BRK0 252 aa22.95■■□□□ 1.26
CHFR-217ENST00000540537 WDR6Q9NNW5 1121 aaKnown RBP22.95■■□□□ 1.26
CHFR-217ENST00000540537 CNTN3Q9P232 1028 aa22.95■■□□□ 1.26
CHFR-217ENST00000540537 HARSP12081 509 aaKnown RBP22.94■■□□□ 1.26
CHFR-217ENST00000540537 SYT1P21579 422 aa22.94■■□□□ 1.26
CHFR-217ENST00000540537 SCP2P22307 547 aa22.94■■□□□ 1.26
CHFR-217ENST00000540537 FGFR3P22607 806 aa22.94■■□□□ 1.26
CHFR-217ENST00000540537 SOX4Q06945 474 aaPredicted RBP22.94■■□□□ 1.26
CHFR-217ENST00000540537 RESTQ13127 1097 aa22.94■■□□□ 1.26
CHFR-217ENST00000540537 PTPAQ15257 358 aa22.94■■□□□ 1.26
CHFR-217ENST00000540537 CD300LGQ6UXG3 332 aa22.94■■□□□ 1.26
CHFR-217ENST00000540537 RASSF8Q8NHQ8 419 aa22.94■■□□□ 1.26
CHFR-217ENST00000540537 STAMQ92783 540 aa22.94■■□□□ 1.26
CHFR-217ENST00000540537 ZMAT2Q96NC0 199 aaKnown RBP22.94■■□□□ 1.26
CHFR-217ENST00000540537 CCSER1Q9C0I3 900 aa22.94■■□□□ 1.26
CHFR-217ENST00000540537 GOLGA2P5Q9HBQ8 144 aa22.94■■□□□ 1.26
CHFR-217ENST00000540537 ANKFY1Q9P2R3 1169 aa22.94■■□□□ 1.26
CHFR-217ENST00000540537 LIMD1Q9UGP4 676 aa22.94■■□□□ 1.26
CHFR-217ENST00000540537 FBXW11Q9UKB1 542 aa22.94■■□□□ 1.26
CHFR-217ENST00000540537 CLIC4Q9Y696 253 aa22.94■■□□□ 1.26
CHFR-217ENST00000540537 CLUHO75153 1309 aa22.93■■□□□ 1.26
CHFR-217ENST00000540537 TRAPPC3O43617 180 aa22.93■■□□□ 1.26
CHFR-217ENST00000540537 MYBP10242 640 aa22.93■■□□□ 1.26
CHFR-217ENST00000540537 ZNF131P52739 623 aa22.93■■□□□ 1.26
CHFR-217ENST00000540537 MCL1Q07820 350 aa22.93■■□□□ 1.26
CHFR-217ENST00000540537 MCM6Q14566 821 aa22.93■■□□□ 1.26
CHFR-217ENST00000540537 HAUS6Q7Z4H7 955 aa22.93■■□□□ 1.26
CHFR-217ENST00000540537 SUGP1Q8IWZ8 645 aaKnown RBP22.93■■□□□ 1.26
CHFR-217ENST00000540537 FBXL6Q8N531 539 aa22.93■■□□□ 1.26
CHFR-217ENST00000540537 LARP4BQ92615 738 aaKnown RBP22.93■■□□□ 1.26
CHFR-217ENST00000540537 PRKD2Q9BZL6 878 aa22.93■■□□□ 1.26
CHFR-217ENST00000540537 PDCD11Q14690 1871 aaKnown RBP22.93■■□□□ 1.26
CHFR-217ENST00000540537 CLDN3O15551 220 aa22.92■■□□□ 1.26
CHFR-217ENST00000540537 ZMYND10O75800 440 aa22.92■■□□□ 1.26
CHFR-217ENST00000540537 FAM13AO94988 1023 aa22.92■■□□□ 1.26
CHFR-217ENST00000540537 ASGR2P07307 311 aa22.92■■□□□ 1.26
CHFR-217ENST00000540537 DHX8Q14562 1220 aaKnown RBP22.92■■□□□ 1.26
CHFR-217ENST00000540537 C3orf58Q8NDZ4 430 aa22.92■■□□□ 1.26
CHFR-217ENST00000540537 PARVGQ9HBI0 331 aa22.92■■□□□ 1.26
CHFR-217ENST00000540537 MTRRQ9UBK8 725 aa22.92■■□□□ 1.26
CHFR-217ENST00000540537 DOCK8Q8NF50 2099 aa22.91■■□□□ 1.26
CHFR-217ENST00000540537 K7ELQ4 463 aaPredicted RBP22.91■■□□□ 1.26
CHFR-217ENST00000540537 PODXLO00592 558 aa22.91■■□□□ 1.26
CHFR-217ENST00000540537 MEFVO15553 781 aaPredicted RBP22.91■■□□□ 1.26
CHFR-217ENST00000540537 IGFBP6P24592 240 aaPredicted RBP22.91■■□□□ 1.26
CHFR-217ENST00000540537 MYCT1Q8N699 235 aa22.91■■□□□ 1.26
CHFR-217ENST00000540537 BICD1Q96G01 975 aa22.91■■□□□ 1.26
CHFR-217ENST00000540537 PIDD1Q9HB75 910 aa22.91■■□□□ 1.26
CHFR-217ENST00000540537 SRPRBQ9Y5M8 271 aaKnown RBP22.91■■□□□ 1.26
CHFR-217ENST00000540537 WDFY4Q6ZS81 3184 aa22.9■■□□□ 1.26
CHFR-217ENST00000540537 K7ENM7 598 aa22.9■■□□□ 1.26
CHFR-217ENST00000540537 ADAM12O43184 909 aa22.9■■□□□ 1.26
CHFR-217ENST00000540537 PIGRP01833 764 aa22.9■■□□□ 1.26
CHFR-217ENST00000540537 KRT18P05783 430 aaKnown RBP22.9■■□□□ 1.26
CHFR-217ENST00000540537 TKTP29401 623 aaKnown RBP22.9■■□□□ 1.26
CHFR-217ENST00000540537 MARCKSP29966 332 aaPredicted RBP22.9■■□□□ 1.26
CHFR-217ENST00000540537 RPL9P32969 192 aaKnown RBP22.9■■□□□ 1.26
CHFR-217ENST00000540537 DDIT3P35638 169 aa22.9■■□□□ 1.26
CHFR-217ENST00000540537 RAB33AQ14088 237 aa22.9■■□□□ 1.26
CHFR-217ENST00000540537 SLC10A6Q3KNW5 377 aa22.9■■□□□ 1.26
CHFR-217ENST00000540537 LIN9Q5TKA1 542 aa22.9■■□□□ 1.26
CHFR-217ENST00000540537 ANKS3Q6ZW76 656 aa22.9■■□□□ 1.26
CHFR-217ENST00000540537 FBXO2Q9UK22 296 aaPredicted RBP22.9■■□□□ 1.26
CHFR-217ENST00000540537 TBX20Q9UMR3 447 aa22.9■■□□□ 1.26
CHFR-217ENST00000540537 MTMR6Q9Y217 621 aa22.9■■□□□ 1.26
CHFR-217ENST00000540537 BACE2Q9Y5Z0 518 aa22.9■■□□□ 1.26
CHFR-217ENST00000540537 MORC2Q9Y6X9 1032 aaPredicted RBP22.9■■□□□ 1.26
CHFR-217ENST00000540537 TRAK2O60296 914 aa22.89■■□□□ 1.25
CHFR-217ENST00000540537 N4BP1O75113 896 aaKnown RBP22.89■■□□□ 1.25
CHFR-217ENST00000540537 TBCAO75347 108 aaKnown RBP22.89■■□□□ 1.25
CHFR-217ENST00000540537 CLTAP09496 248 aa22.89■■□□□ 1.25
CHFR-217ENST00000540537 HNRNPA1P09651 372 aaKnown RBP eCLIP22.89■■□□□ 1.25
CHFR-217ENST00000540537 HOXA9P31269 272 aa22.89■■□□□ 1.25
CHFR-217ENST00000540537 ABCD1P33897 745 aa22.89■■□□□ 1.25
CHFR-217ENST00000540537 MATR3P43243 847 aaKnown RBP eCLIP22.89■■□□□ 1.25
CHFR-217ENST00000540537 BRCC3P46736 316 aa22.89■■□□□ 1.25
CHFR-217ENST00000540537 LIG4P49917 911 aa22.89■■□□□ 1.25
CHFR-217ENST00000540537 KYAT1Q16773 422 aa22.89■■□□□ 1.25
CHFR-217ENST00000540537 USP49Q70CQ1 688 aa22.89■■□□□ 1.25
CHFR-217ENST00000540537 C18orf25Q96B23 403 aaPredicted RBP22.89■■□□□ 1.25
CHFR-217ENST00000540537 EPSTI1Q96J88 318 aa22.89■■□□□ 1.25
CHFR-217ENST00000540537 HAPLN2Q9GZV7 340 aa22.89■■□□□ 1.25
CHFR-217ENST00000540537 PLEKHA5Q9HAU0 1116 aa22.89■■□□□ 1.25
CHFR-217ENST00000540537 EPS15L1Q9UBC2 864 aa22.89■■□□□ 1.25
CHFR-217ENST00000540537 STK17AQ9UEE5 414 aa22.89■■□□□ 1.25
CHFR-217ENST00000540537 CCDC39Q9UFE4 941 aa22.89■■□□□ 1.25
CHFR-217ENST00000540537 KMT2EQ8IZD2 1858 aa22.89■■□□□ 1.25
CHFR-217ENST00000540537 HNRNPDLO14979 420 aaKnown RBP22.88■■□□□ 1.25
CHFR-217ENST00000540537 GBP2P32456 591 aaPredicted RBP22.88■■□□□ 1.25
CHFR-217ENST00000540537 OR1D2P34982 312 aa22.88■■□□□ 1.25
CHFR-217ENST00000540537 SEZ6Q53EL9 994 aa22.88■■□□□ 1.25
CHFR-217ENST00000540537 SPECC1Q5M775 1068 aa22.88■■□□□ 1.25
CHFR-217ENST00000540537 FAM173BQ6P4H8 233 aa22.88■■□□□ 1.25
CHFR-217ENST00000540537 FIZ1Q96SL8 496 aa22.88■■□□□ 1.25
CHFR-217ENST00000540537 SMOC2Q9H3U7 446 aa22.88■■□□□ 1.25
CHFR-217ENST00000540537 ZSCAN16Q9H4T2 348 aaPredicted RBP22.88■■□□□ 1.25
CHFR-217ENST00000540537 IGSF9Q9P2J2 1179 aa22.88■■□□□ 1.25
CHFR-217ENST00000540537 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.88■■□□□ 1.25
CHFR-217ENST00000540537 DOCK6Q96HP0 2047 aa22.87■■□□□ 1.25
CHFR-217ENST00000540537 I3L4J1 428 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms