RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 CENPCQ03188 943 aa10.31□□□□□ -0.76
CDH13-204ENST00000539548 PTP4A2Q12974 167 aa10.31□□□□□ -0.76
CDH13-204ENST00000539548 SNRNP35Q16560 246 aaKnown RBP10.31□□□□□ -0.76
CDH13-204ENST00000539548 RNF43Q68DV7 783 aa10.31□□□□□ -0.76
CDH13-204ENST00000539548 ARHGEF18Q6ZSZ5 1173 aa10.31□□□□□ -0.76
CDH13-204ENST00000539548 ASRGL1Q7L266 308 aa10.31□□□□□ -0.76
CDH13-204ENST00000539548 LDHDQ86WU2 507 aa10.31□□□□□ -0.76
CDH13-204ENST00000539548 CBWD2Q8IUF1 395 aa10.31□□□□□ -0.76
CDH13-204ENST00000539548 MAB21L3Q8N8X9 362 aa10.31□□□□□ -0.76
CDH13-204ENST00000539548 ANKRD42Q8N9B4 389 aa10.31□□□□□ -0.76
CDH13-204ENST00000539548 BBOF1Q8ND07 529 aa10.31□□□□□ -0.76
CDH13-204ENST00000539548 AGAP11Q8TF27 550 aa10.31□□□□□ -0.76
CDH13-204ENST00000539548 KLHL29Q96CT2 875 aa10.31□□□□□ -0.76
CDH13-204ENST00000539548 CSRNP1Q96S65 589 aa10.31□□□□□ -0.76
CDH13-204ENST00000539548 KCNH7Q9NS40 1196 aa10.31□□□□□ -0.76
CDH13-204ENST00000539548 ANAPC7Q9UJX3 599 aa10.31□□□□□ -0.76
CDH13-204ENST00000539548 EXOC7Q9UPT5 735 aa10.31□□□□□ -0.76
CDH13-204ENST00000539548 NAALADL1Q9UQQ1 740 aa10.31□□□□□ -0.76
CDH13-204ENST00000539548 C15orf41Q9Y2V0 281 aa10.31□□□□□ -0.76
CDH13-204ENST00000539548 ADGRA3Q8IWK6 1321 aa10.31□□□□□ -0.76
CDH13-204ENST00000539548 SLC16A4O15374 487 aa10.31□□□□□ -0.76
CDH13-204ENST00000539548 SCP2P22307 547 aa10.31□□□□□ -0.76
CDH13-204ENST00000539548 GTF2H1P32780 548 aa10.31□□□□□ -0.76
CDH13-204ENST00000539548 STX2P32856 288 aa10.31□□□□□ -0.76
CDH13-204ENST00000539548 ADCY8P40145 1251 aa10.31□□□□□ -0.76
CDH13-204ENST00000539548 SKIV2L2P42285 1042 aaKnown RBP10.31□□□□□ -0.76
CDH13-204ENST00000539548 HSD17B4P51659 736 aa10.31□□□□□ -0.76
CDH13-204ENST00000539548 CCDC15Q0P6D6 951 aa10.31□□□□□ -0.76
CDH13-204ENST00000539548 ACVR2BQ13705 512 aa10.31□□□□□ -0.76
CDH13-204ENST00000539548 STAT4Q14765 748 aa10.31□□□□□ -0.76
CDH13-204ENST00000539548 FAM160B2Q86V87 743 aa10.31□□□□□ -0.76
CDH13-204ENST00000539548 MCOLN2Q8IZK6 566 aa10.31□□□□□ -0.76
CDH13-204ENST00000539548 CYP4X1Q8N118 509 aa10.31□□□□□ -0.76
CDH13-204ENST00000539548 FITM2Q8N6M3 262 aa10.31□□□□□ -0.76
CDH13-204ENST00000539548 FBXL13Q8NEE6 735 aa10.31□□□□□ -0.76
CDH13-204ENST00000539548 FAM212AQ96EL1 285 aa10.31□□□□□ -0.76
CDH13-204ENST00000539548 RSRC1Q96IZ7 334 aaKnown RBP10.31□□□□□ -0.76
CDH13-204ENST00000539548 MFSD14AQ96MC6 490 aa10.31□□□□□ -0.76
CDH13-204ENST00000539548 TGS1Q96RS0 853 aaKnown RBP10.31□□□□□ -0.76
CDH13-204ENST00000539548 CCDC77Q9BR77 488 aa10.31□□□□□ -0.76
CDH13-204ENST00000539548 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.31□□□□□ -0.76
CDH13-204ENST00000539548 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.31□□□□□ -0.76
CDH13-204ENST00000539548 RAB20Q9NX57 234 aa10.31□□□□□ -0.76
CDH13-204ENST00000539548 CTNNAL1Q9UBT7 734 aa10.31□□□□□ -0.76
CDH13-204ENST00000539548 GGT7Q9UJ14 662 aa10.31□□□□□ -0.76
CDH13-204ENST00000539548 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.31□□□□□ -0.76
CDH13-204ENST00000539548 BRWD3Q6RI45 1802 aa10.3□□□□□ -0.76
CDH13-204ENST00000539548 FOXO6A8MYZ6 492 aa10.3□□□□□ -0.76
CDH13-204ENST00000539548 ECE2O60344 883 aa10.3□□□□□ -0.76
CDH13-204ENST00000539548 CDH16O75309 829 aa10.3□□□□□ -0.76
CDH13-204ENST00000539548 GH1P01241 217 aa10.3□□□□□ -0.76
CDH13-204ENST00000539548 MYBL1P10243 752 aa10.3□□□□□ -0.76
CDH13-204ENST00000539548 UNGP13051 313 aaPredicted RBP10.3□□□□□ -0.76
CDH13-204ENST00000539548 CCNB1P14635 433 aa10.3□□□□□ -0.76
CDH13-204ENST00000539548 ADSSP30520 456 aa10.3□□□□□ -0.76
CDH13-204ENST00000539548 CLNS1AP54105 237 aaKnown RBP10.3□□□□□ -0.76
CDH13-204ENST00000539548 PEX3P56589 373 aa10.3□□□□□ -0.76
CDH13-204ENST00000539548 STRN3Q13033 797 aa10.3□□□□□ -0.76
CDH13-204ENST00000539548 LLGL1Q15334 1064 aa10.3□□□□□ -0.76
CDH13-204ENST00000539548 MTFR1Q15390 333 aa10.3□□□□□ -0.76
CDH13-204ENST00000539548 CCNG2Q16589 344 aa10.3□□□□□ -0.76
CDH13-204ENST00000539548 CC2D2BQ6DHV5 1058 aa10.3□□□□□ -0.76
CDH13-204ENST00000539548 PPP1R21Q6ZMI0 780 aa10.3□□□□□ -0.76
CDH13-204ENST00000539548 ENOSF1Q7L5Y1 443 aa10.3□□□□□ -0.76
CDH13-204ENST00000539548 GDAP1Q8TB36 358 aa10.3□□□□□ -0.76
CDH13-204ENST00000539548 NSMCE1Q8WV22 266 aa10.3□□□□□ -0.76
CDH13-204ENST00000539548 ATG4AQ8WYN0 398 aa10.3□□□□□ -0.76
CDH13-204ENST00000539548 DDX27Q96GQ7 796 aaKnown RBP10.3□□□□□ -0.76
CDH13-204ENST00000539548 MASTLQ96GX5 879 aa10.3□□□□□ -0.76
CDH13-204ENST00000539548 HERPUD2Q9BSE4 406 aa10.3□□□□□ -0.76
CDH13-204ENST00000539548 MOV10L1Q9BXT6 1211 aaKnown RBP10.3□□□□□ -0.76
CDH13-204ENST00000539548 FOXP3Q9BZS1 431 aa10.3□□□□□ -0.76
CDH13-204ENST00000539548 EURLQ9NYK6 297 aa10.3□□□□□ -0.76
CDH13-204ENST00000539548 NKIRAS1Q9NYS0 192 aa10.3□□□□□ -0.76
CDH13-204ENST00000539548 NOP53Q9NZM5 478 aaKnown RBP10.3□□□□□ -0.76
CDH13-204ENST00000539548 L3MBTL1Q9Y468 752 aa10.3□□□□□ -0.76
CDH13-204ENST00000539548 CEP83Q9Y592 693 aa10.3□□□□□ -0.76
CDH13-204ENST00000539548 RGPD3A6NKT7 1758 aaPredicted RBP10.3□□□□□ -0.76
CDH13-204ENST00000539548 RGPD4Q7Z3J3 1758 aa10.3□□□□□ -0.76
CDH13-204ENST00000539548 MROH7Q68CQ1 1323 aa10.29□□□□□ -0.76
CDH13-204ENST00000539548 KRT16P08779 473 aa10.29□□□□□ -0.76
CDH13-204ENST00000539548 RPSAP08865 295 aaKnown RBP10.29□□□□□ -0.76
CDH13-204ENST00000539548 CETPP11597 493 aa10.29□□□□□ -0.76
CDH13-204ENST00000539548 TAC1P20366 129 aa10.29□□□□□ -0.76
CDH13-204ENST00000539548 YWHABP31946 246 aaKnown RBP10.29□□□□□ -0.76
CDH13-204ENST00000539548 MYO1EQ12965 1108 aa10.29□□□□□ -0.76
CDH13-204ENST00000539548 KLF1Q13351 362 aaPredicted RBP10.29□□□□□ -0.76
CDH13-204ENST00000539548 MKRN4PQ13434 485 aaPredicted RBP10.29□□□□□ -0.76
CDH13-204ENST00000539548 TRIP13Q15645 432 aaPredicted RBP10.29□□□□□ -0.76
CDH13-204ENST00000539548 GRIPAP1Q4V328 841 aa10.29□□□□□ -0.76
CDH13-204ENST00000539548 CGB2Q6NT52 195 aa10.29□□□□□ -0.76
CDH13-204ENST00000539548 CEP128Q6ZU80 1094 aa10.29□□□□□ -0.76
CDH13-204ENST00000539548 ANKRD35Q8N283 1001 aa10.29□□□□□ -0.76
CDH13-204ENST00000539548 RIBC1Q8N443 379 aaPredicted RBP10.29□□□□□ -0.76
CDH13-204ENST00000539548 TAS1R2Q8TE23 839 aa10.29□□□□□ -0.76
CDH13-204ENST00000539548 CCDC127Q96BQ5 260 aa10.29□□□□□ -0.76
CDH13-204ENST00000539548 TRIM11Q96F44 468 aa10.29□□□□□ -0.76
CDH13-204ENST00000539548 PRMT6Q96LA8 375 aaPredicted RBP10.29□□□□□ -0.76
CDH13-204ENST00000539548 FBXL18Q96ME1 805 aa10.29□□□□□ -0.76
CDH13-204ENST00000539548 TRIM7Q9C029 511 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms