RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 GEMIN8Q9NWZ8 242 aaKnown RBP18.4■□□□□ 0.54
PCDHB17P-201ENST00000539533 RBAKQ9NYW8 714 aaPredicted RBP18.4■□□□□ 0.54
PCDHB17P-201ENST00000539533 SNX12Q9UMY4 172 aa18.4■□□□□ 0.54
PCDHB17P-201ENST00000539533 A0A087X0T9 212 aa18.39■□□□□ 0.53
PCDHB17P-201ENST00000539533 ACKR2O00590 384 aa18.39■□□□□ 0.53
PCDHB17P-201ENST00000539533 ALDH1A1P00352 501 aa18.39■□□□□ 0.53
PCDHB17P-201ENST00000539533 FAM228BP0C875 321 aa18.39■□□□□ 0.53
PCDHB17P-201ENST00000539533 TMOD1P28289 359 aa18.39■□□□□ 0.53
PCDHB17P-201ENST00000539533 STAT1P42224 750 aa18.39■□□□□ 0.53
PCDHB17P-201ENST00000539533 KIAA0753Q2KHM9 967 aa18.39■□□□□ 0.53
PCDHB17P-201ENST00000539533 CCDC70Q6NSX1 233 aa18.39■□□□□ 0.53
PCDHB17P-201ENST00000539533 TRPV1Q8NER1 839 aa18.39■□□□□ 0.53
PCDHB17P-201ENST00000539533 AENQ8WTP8 325 aaKnown RBP18.39■□□□□ 0.53
PCDHB17P-201ENST00000539533 PPM1EQ8WY54 764 aa18.39■□□□□ 0.53
PCDHB17P-201ENST00000539533 CAPNS2Q96L46 248 aa18.39■□□□□ 0.53
PCDHB17P-201ENST00000539533 COQ4Q9Y3A0 265 aa18.39■□□□□ 0.53
PCDHB17P-201ENST00000539533 KAT6AQ92794 2004 aa18.39■□□□□ 0.53
PCDHB17P-201ENST00000539533 ABLIM1O14639 778 aa18.39■□□□□ 0.53
PCDHB17P-201ENST00000539533 FAM189A1O60320 539 aa18.39■□□□□ 0.53
PCDHB17P-201ENST00000539533 F2P00734 622 aa18.39■□□□□ 0.53
PCDHB17P-201ENST00000539533 GTF2H1P32780 548 aa18.39■□□□□ 0.53
PCDHB17P-201ENST00000539533 SOX5P35711 763 aa18.39■□□□□ 0.53
PCDHB17P-201ENST00000539533 TNFSF9P41273 254 aa18.39■□□□□ 0.53
PCDHB17P-201ENST00000539533 FLT3LGP49771 235 aa18.39■□□□□ 0.53
PCDHB17P-201ENST00000539533 DEFB115Q30KQ5 88 aa18.39■□□□□ 0.53
PCDHB17P-201ENST00000539533 CREG2Q8IUH2 290 aa18.39■□□□□ 0.53
PCDHB17P-201ENST00000539533 MMGT1Q8N4V1 131 aa18.39■□□□□ 0.53
PCDHB17P-201ENST00000539533 TRIM58Q8NG06 486 aa18.39■□□□□ 0.53
PCDHB17P-201ENST00000539533 LMBR1Q8WVP7 490 aa18.39■□□□□ 0.53
PCDHB17P-201ENST00000539533 KAT5Q92993 513 aa18.39■□□□□ 0.53
PCDHB17P-201ENST00000539533 FNBP1Q96RU3 617 aa18.39■□□□□ 0.53
PCDHB17P-201ENST00000539533 PTPRJQ12913 1337 aa18.39■□□□□ 0.53
PCDHB17P-201ENST00000539533 GOLGA6BA6NDN3 693 aa18.38■□□□□ 0.53
PCDHB17P-201ENST00000539533 FOXN3O00409 490 aaPredicted RBP18.38■□□□□ 0.53
PCDHB17P-201ENST00000539533 EVI5O60447 810 aa18.38■□□□□ 0.53
PCDHB17P-201ENST00000539533 TNNI1P19237 187 aa18.38■□□□□ 0.53
PCDHB17P-201ENST00000539533 PRKCIP41743 596 aa18.38■□□□□ 0.53
PCDHB17P-201ENST00000539533 MAGEA1P43355 309 aa18.38■□□□□ 0.53
PCDHB17P-201ENST00000539533 CLDN10P78369 228 aa18.38■□□□□ 0.53
PCDHB17P-201ENST00000539533 PRPF4BQ13523 1007 aaKnown RBP18.38■□□□□ 0.53
PCDHB17P-201ENST00000539533 KIAA0319LQ8IZA0 1049 aa18.38■□□□□ 0.53
PCDHB17P-201ENST00000539533 FBXL13Q8NEE6 735 aa18.38■□□□□ 0.53
PCDHB17P-201ENST00000539533 RAB20Q9NX57 234 aa18.38■□□□□ 0.53
PCDHB17P-201ENST00000539533 RBAK-RBAKDNI3L0D1 243 aa18.38■□□□□ 0.53
PCDHB17P-201ENST00000539533 SHOX2O60902 331 aaPredicted RBP18.38■□□□□ 0.53
PCDHB17P-201ENST00000539533 TACC1O75410 805 aa18.38■□□□□ 0.53
PCDHB17P-201ENST00000539533 PHKA2P46019 1235 aa18.38■□□□□ 0.53
PCDHB17P-201ENST00000539533 SLC18A3Q16572 532 aa18.38■□□□□ 0.53
PCDHB17P-201ENST00000539533 ATF7IP2Q5U623 682 aa18.38■□□□□ 0.53
PCDHB17P-201ENST00000539533 TSHZ1Q6ZSZ6 1077 aa18.38■□□□□ 0.53
PCDHB17P-201ENST00000539533 FAM76AQ8TAV0 307 aa18.38■□□□□ 0.53
PCDHB17P-201ENST00000539533 TRIB2Q92519 343 aa18.38■□□□□ 0.53
PCDHB17P-201ENST00000539533 NFKBIZQ9BYH8 718 aa18.38■□□□□ 0.53
PCDHB17P-201ENST00000539533 AP5M1Q9H0R1 490 aa18.38■□□□□ 0.53
PCDHB17P-201ENST00000539533 PTPRHQ9HD43 1115 aa18.38■□□□□ 0.53
PCDHB17P-201ENST00000539533 BZW2Q9Y6E2 419 aaKnown RBP18.38■□□□□ 0.53
PCDHB17P-201ENST00000539533 SMIM10L2AP0DMW4 78 aa18.37■□□□□ 0.53
PCDHB17P-201ENST00000539533 SMIM10L2BP0DMW5 78 aa18.37■□□□□ 0.53
PCDHB17P-201ENST00000539533 ENPEPQ07075 957 aa18.37■□□□□ 0.53
PCDHB17P-201ENST00000539533 MCL1Q07820 350 aa18.37■□□□□ 0.53
PCDHB17P-201ENST00000539533 EEF1DP3Q658K8 133 aa18.37■□□□□ 0.53
PCDHB17P-201ENST00000539533 ZNF572Q7Z3I7 529 aaPredicted RBP18.37■□□□□ 0.53
PCDHB17P-201ENST00000539533 CAPN6Q9Y6Q1 641 aa18.37■□□□□ 0.53
PCDHB17P-201ENST00000539533 DNAH12Q6ZR08 3092 aa18.37■□□□□ 0.53
PCDHB17P-201ENST00000539533 CNTNAP2Q9UHC6 1331 aa18.37■□□□□ 0.53
PCDHB17P-201ENST00000539533 GOLGA6CA6NDK9 693 aa18.37■□□□□ 0.53
PCDHB17P-201ENST00000539533 MYL3P08590 195 aa18.37■□□□□ 0.53
PCDHB17P-201ENST00000539533 GOLGA6DP0CG33 693 aa18.37■□□□□ 0.53
PCDHB17P-201ENST00000539533 FERP16591 822 aa18.37■□□□□ 0.53
PCDHB17P-201ENST00000539533 PROZP22891 400 aa18.37■□□□□ 0.53
PCDHB17P-201ENST00000539533 CPT1AP50416 773 aa18.37■□□□□ 0.53
PCDHB17P-201ENST00000539533 GPC3P51654 580 aa18.37■□□□□ 0.53
PCDHB17P-201ENST00000539533 PRKCZQ05513 592 aa18.37■□□□□ 0.53
PCDHB17P-201ENST00000539533 POU5F1BQ06416 359 aa18.37■□□□□ 0.53
PCDHB17P-201ENST00000539533 HIC1Q14526 733 aa18.37■□□□□ 0.53
PCDHB17P-201ENST00000539533 TMEM132AQ24JP5 1023 aa18.37■□□□□ 0.53
PCDHB17P-201ENST00000539533 NFRKBQ6P4R8 1299 aa18.37■□□□□ 0.53
PCDHB17P-201ENST00000539533 C15orf39Q6ZRI6 1047 aa18.37■□□□□ 0.53
PCDHB17P-201ENST00000539533 PPM1KQ8N3J5 372 aa18.37■□□□□ 0.53
PCDHB17P-201ENST00000539533 PI4K2AQ9BTU6 479 aa18.37■□□□□ 0.53
PCDHB17P-201ENST00000539533 GOLGA6AQ9NYA3 693 aa18.37■□□□□ 0.53
PCDHB17P-201ENST00000539533 C4BPAP04003 597 aaKnown RBP18.36■□□□□ 0.53
PCDHB17P-201ENST00000539533 AKR1A1P14550 325 aa18.36■□□□□ 0.53
PCDHB17P-201ENST00000539533 RFX1P22670 979 aa18.36■□□□□ 0.53
PCDHB17P-201ENST00000539533 ITIH3Q06033 890 aa18.36■□□□□ 0.53
PCDHB17P-201ENST00000539533 MFSD10Q14728 455 aa18.36■□□□□ 0.53
PCDHB17P-201ENST00000539533 MPZL3Q6UWV2 235 aa18.36■□□□□ 0.53
PCDHB17P-201ENST00000539533 NLRP7Q8WX94 980 aa18.36■□□□□ 0.53
PCDHB17P-201ENST00000539533 RUBCNQ92622 972 aa18.36■□□□□ 0.53
PCDHB17P-201ENST00000539533 HINFPQ9BQA5 517 aa18.36■□□□□ 0.53
PCDHB17P-201ENST00000539533 Q9Y3F1 56 aa18.36■□□□□ 0.53
PCDHB17P-201ENST00000539533 RRN3P2A6NIE6 340 aa18.35■□□□□ 0.53
PCDHB17P-201ENST00000539533 OGTO15294 1046 aa18.35■□□□□ 0.53
PCDHB17P-201ENST00000539533 PRLRP16471 622 aa18.35■□□□□ 0.53
PCDHB17P-201ENST00000539533 TMEM62Q0P6H9 643 aa18.35■□□□□ 0.53
PCDHB17P-201ENST00000539533 TRIM32Q13049 653 aa18.35■□□□□ 0.53
PCDHB17P-201ENST00000539533 AMHR2Q16671 573 aa18.35■□□□□ 0.53
PCDHB17P-201ENST00000539533 DNAJC21Q5F1R6 531 aaKnown RBP18.35■□□□□ 0.53
PCDHB17P-201ENST00000539533 TDRD10Q5VZ19 366 aaKnown RBP18.35■□□□□ 0.53
PCDHB17P-201ENST00000539533 SND1Q7KZF4 910 aaKnown RBP eCLIP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms