RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 UPP1Q16831 310 aa24.31■■□□□ 1.48
SCARB1-206ENST00000539320 ALKAL1Q6UXT8 129 aa24.31■■□□□ 1.48
SCARB1-206ENST00000539320 GPBP1Q86WP2 473 aa24.31■■□□□ 1.48
SCARB1-206ENST00000539320 RASSF8Q8NHQ8 419 aa24.31■■□□□ 1.48
SCARB1-206ENST00000539320 PRKD2Q9BZL6 878 aa24.31■■□□□ 1.48
SCARB1-206ENST00000539320 LARSQ9P2J5 1176 aaKnown RBP24.31■■□□□ 1.48
SCARB1-206ENST00000539320 ODF2LQ9ULJ1 636 aa24.31■■□□□ 1.48
SCARB1-206ENST00000539320 H0YCG3 227 aa24.3■■□□□ 1.48
SCARB1-206ENST00000539320 GBP2P32456 591 aaPredicted RBP24.3■■□□□ 1.48
SCARB1-206ENST00000539320 GRIN1Q05586 938 aa24.3■■□□□ 1.48
SCARB1-206ENST00000539320 SF3A1Q15459 793 aaKnown RBP24.3■■□□□ 1.48
SCARB1-206ENST00000539320 LIN9Q5TKA1 542 aa24.3■■□□□ 1.48
SCARB1-206ENST00000539320 ZPBP2Q6X784 338 aa24.3■■□□□ 1.48
SCARB1-206ENST00000539320 C3orf58Q8NDZ4 430 aa24.3■■□□□ 1.48
SCARB1-206ENST00000539320 LRRC15Q8TF66 581 aa24.3■■□□□ 1.48
SCARB1-206ENST00000539320 ZBTB45Q96K62 511 aaPredicted RBP24.3■■□□□ 1.48
SCARB1-206ENST00000539320 CNTN3Q9P232 1028 aa24.3■■□□□ 1.48
SCARB1-206ENST00000539320 N4BP1O75113 896 aaKnown RBP24.29■■□□□ 1.48
SCARB1-206ENST00000539320 PDGFBP01127 241 aaPredicted RBP24.29■■□□□ 1.48
SCARB1-206ENST00000539320 KCNE1P15382 129 aa24.29■■□□□ 1.48
SCARB1-206ENST00000539320 PLCG1P19174 1290 aa24.29■■□□□ 1.48
SCARB1-206ENST00000539320 IGFBP6P24592 240 aaPredicted RBP24.29■■□□□ 1.48
SCARB1-206ENST00000539320 VCPP55072 806 aaKnown RBP24.29■■□□□ 1.48
SCARB1-206ENST00000539320 NCKAP1LP55160 1127 aa24.29■■□□□ 1.48
SCARB1-206ENST00000539320 NHLH1Q02575 133 aa24.29■■□□□ 1.48
SCARB1-206ENST00000539320 ARSHQ5FYA8 562 aa24.29■■□□□ 1.48
SCARB1-206ENST00000539320 CD300LGQ6UXG3 332 aa24.29■■□□□ 1.48
SCARB1-206ENST00000539320 PRSS33Q8NF86 280 aa24.29■■□□□ 1.48
SCARB1-206ENST00000539320 DDX27Q96GQ7 796 aaKnown RBP24.29■■□□□ 1.48
SCARB1-206ENST00000539320 ZMAT2Q96NC0 199 aaKnown RBP24.29■■□□□ 1.48
SCARB1-206ENST00000539320 PRRX2Q99811 253 aa24.29■■□□□ 1.48
SCARB1-206ENST00000539320 REEP2Q9BRK0 252 aa24.29■■□□□ 1.48
SCARB1-206ENST00000539320 BLOC1S4Q9NUP1 217 aa24.29■■□□□ 1.48
SCARB1-206ENST00000539320 MTRRQ9UBK8 725 aa24.29■■□□□ 1.48
SCARB1-206ENST00000539320 PODXLO00592 558 aa24.28■■□□□ 1.48
SCARB1-206ENST00000539320 ADAM12O43184 909 aa24.28■■□□□ 1.48
SCARB1-206ENST00000539320 TRAPPC3O43617 180 aa24.28■■□□□ 1.48
SCARB1-206ENST00000539320 TKTP29401 623 aaKnown RBP24.28■■□□□ 1.48
SCARB1-206ENST00000539320 KARSQ15046 597 aaKnown RBP24.28■■□□□ 1.48
SCARB1-206ENST00000539320 RAD54LQ92698 747 aa24.28■■□□□ 1.48
SCARB1-206ENST00000539320 KCNN1Q92952 543 aa24.28■■□□□ 1.48
SCARB1-206ENST00000539320 BICD1Q96G01 975 aa24.28■■□□□ 1.48
SCARB1-206ENST00000539320 I3L4J1 428 aa24.27■■□□□ 1.48
SCARB1-206ENST00000539320 FAM13AO94988 1023 aa24.27■■□□□ 1.48
SCARB1-206ENST00000539320 C8AP07357 584 aa24.27■■□□□ 1.48
SCARB1-206ENST00000539320 BRCC3P46736 316 aa24.27■■□□□ 1.48
SCARB1-206ENST00000539320 MCL1Q07820 350 aa24.27■■□□□ 1.48
SCARB1-206ENST00000539320 TDGQ13569 410 aa24.27■■□□□ 1.48
SCARB1-206ENST00000539320 DHX8Q14562 1220 aaKnown RBP24.27■■□□□ 1.48
SCARB1-206ENST00000539320 IER5LQ5T953 404 aa24.27■■□□□ 1.48
SCARB1-206ENST00000539320 GET4Q7L5D6 327 aaPredicted RBP24.27■■□□□ 1.48
SCARB1-206ENST00000539320 MYADMQ96S97 322 aa24.27■■□□□ 1.48
SCARB1-206ENST00000539320 KCNK12Q9HB15 430 aa24.27■■□□□ 1.48
SCARB1-206ENST00000539320 IGSF9Q9P2J2 1179 aa24.27■■□□□ 1.48
SCARB1-206ENST00000539320 EPS15L1Q9UBC2 864 aa24.27■■□□□ 1.48
SCARB1-206ENST00000539320 K7ENM7 598 aa24.26■■□□□ 1.47
SCARB1-206ENST00000539320 CLDN3O15551 220 aa24.26■■□□□ 1.47
SCARB1-206ENST00000539320 MEFVO15553 781 aaPredicted RBP24.26■■□□□ 1.47
SCARB1-206ENST00000539320 HNRNPA1P09651 372 aaKnown RBP eCLIP24.26■■□□□ 1.47
SCARB1-206ENST00000539320 AVPR2P30518 371 aa24.26■■□□□ 1.47
SCARB1-206ENST00000539320 MATR3P43243 847 aaKnown RBP eCLIP24.26■■□□□ 1.472e-7■■□□□ 13.1
SCARB1-206ENST00000539320 PTPN5P54829 565 aa24.26■■□□□ 1.47
SCARB1-206ENST00000539320 RAB33AQ14088 237 aa24.26■■□□□ 1.47
SCARB1-206ENST00000539320 MCM6Q14566 821 aa24.26■■□□□ 1.47
SCARB1-206ENST00000539320 PPM1LQ5SGD2 360 aa24.26■■□□□ 1.47
SCARB1-206ENST00000539320 ANKS3Q6ZW76 656 aa24.26■■□□□ 1.47
SCARB1-206ENST00000539320 HAUS6Q7Z4H7 955 aa24.26■■□□□ 1.47
SCARB1-206ENST00000539320 PARVGQ9HBI0 331 aa24.26■■□□□ 1.47
SCARB1-206ENST00000539320 DUSP12Q9UNI6 340 aa24.26■■□□□ 1.47
SCARB1-206ENST00000539320 BACE2Q9Y5Z0 518 aa24.26■■□□□ 1.47
SCARB1-206ENST00000539320 PDCD11Q14690 1871 aaKnown RBP24.26■■□□□ 1.47
SCARB1-206ENST00000539320 KRT18P05783 430 aaKnown RBP24.25■■□□□ 1.47
SCARB1-206ENST00000539320 HOXA9P31269 272 aa24.25■■□□□ 1.47
SCARB1-206ENST00000539320 OR1D2P34982 312 aa24.25■■□□□ 1.47
SCARB1-206ENST00000539320 ZNF131P52739 623 aa24.25■■□□□ 1.47
SCARB1-206ENST00000539320 RESTQ13127 1097 aa24.25■■□□□ 1.47
SCARB1-206ENST00000539320 SEZ6Q53EL9 994 aa24.25■■□□□ 1.47
SCARB1-206ENST00000539320 LARP4BQ92615 738 aaKnown RBP24.25■■□□□ 1.47
SCARB1-206ENST00000539320 C18orf25Q96B23 403 aaPredicted RBP24.25■■□□□ 1.47
SCARB1-206ENST00000539320 CDY1Q9Y6F8 540 aa24.25■■□□□ 1.47
SCARB1-206ENST00000539320 DOCK6Q96HP0 2047 aa24.24■■□□□ 1.47
SCARB1-206ENST00000539320 TBCAO75347 108 aaKnown RBP24.24■■□□□ 1.47
SCARB1-206ENST00000539320 CXCL8P10145 99 aa24.24■■□□□ 1.47
SCARB1-206ENST00000539320 SCP2P22307 547 aa24.24■■□□□ 1.47
SCARB1-206ENST00000539320 RPL9P32969 192 aaKnown RBP24.24■■□□□ 1.47
SCARB1-206ENST00000539320 LIG4P49917 911 aa24.24■■□□□ 1.47
SCARB1-206ENST00000539320 PTPAQ15257 358 aa24.24■■□□□ 1.47
SCARB1-206ENST00000539320 SLC10A6Q3KNW5 377 aa24.24■■□□□ 1.47
SCARB1-206ENST00000539320 MYCT1Q8N699 235 aa24.24■■□□□ 1.47
SCARB1-206ENST00000539320 SLC7A14Q8TBB6 771 aa24.24■■□□□ 1.47
SCARB1-206ENST00000539320 BACH2Q9BYV9 841 aa24.24■■□□□ 1.47
SCARB1-206ENST00000539320 CCSER1Q9C0I3 900 aa24.24■■□□□ 1.47
SCARB1-206ENST00000539320 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.24■■□□□ 1.471e-7■■□□□ 13.4
SCARB1-206ENST00000539320 NUB1Q9Y5A7 615 aa24.24■■□□□ 1.47
SCARB1-206ENST00000539320 CLIC4Q9Y696 253 aa24.24■■□□□ 1.47
SCARB1-206ENST00000539320 WDFY4Q6ZS81 3184 aa24.24■■□□□ 1.47
SCARB1-206ENST00000539320 HNRNPDLO14979 420 aaKnown RBP24.23■■□□□ 1.47
SCARB1-206ENST00000539320 SYN3O14994 580 aa24.23■■□□□ 1.47
SCARB1-206ENST00000539320 XYLBO75191 536 aa24.23■■□□□ 1.47
SCARB1-206ENST00000539320 POU2F2P09086 479 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms