RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 CLTBP09497 229 aa16.64■□□□□ 0.25
VAMP1-207ENST00000539047 ITGA4P13612 1032 aa16.64■□□□□ 0.25
VAMP1-207ENST00000539047 POLR2FP61218 127 aaKnown RBP16.64■□□□□ 0.25
VAMP1-207ENST00000539047 KCNMA1Q12791 1236 aa16.64■□□□□ 0.25
VAMP1-207ENST00000539047 ZACNQ401N2 412 aa16.64■□□□□ 0.25
VAMP1-207ENST00000539047 LMBRD2Q68DH5 695 aaPredicted RBP16.64■□□□□ 0.25
VAMP1-207ENST00000539047 SV2AQ7L0J3 742 aa16.64■□□□□ 0.25
VAMP1-207ENST00000539047 OR8K1Q8NGG5 319 aa16.64■□□□□ 0.25
VAMP1-207ENST00000539047 SEPT8Q92599 483 aa16.64■□□□□ 0.25
VAMP1-207ENST00000539047 KIF12Q96FN5 646 aa16.64■□□□□ 0.25
VAMP1-207ENST00000539047 SNX27Q96L92 541 aa16.64■□□□□ 0.25
VAMP1-207ENST00000539047 RPS6KC1Q96S38 1066 aa16.64■□□□□ 0.25
VAMP1-207ENST00000539047 NAA15Q9BXJ9 866 aaKnown RBP16.64■□□□□ 0.25
VAMP1-207ENST00000539047 MTMR12Q9C0I1 747 aa16.64■□□□□ 0.25
VAMP1-207ENST00000539047 AGO3Q9H9G7 860 aaKnown RBP16.64■□□□□ 0.25
VAMP1-207ENST00000539047 TMEM39AQ9NV64 488 aa16.64■□□□□ 0.25
VAMP1-207ENST00000539047 RAB20Q9NX57 234 aa16.64■□□□□ 0.25
VAMP1-207ENST00000539047 APEX2Q9UBZ4 518 aa16.64■□□□□ 0.25
VAMP1-207ENST00000539047 FBXL5Q9UKA1 691 aa16.64■□□□□ 0.25
VAMP1-207ENST00000539047 COQ4Q9Y3A0 265 aa16.64■□□□□ 0.25
VAMP1-207ENST00000539047 PCDHB2Q9Y5E7 798 aa16.64■□□□□ 0.25
VAMP1-207ENST00000539047 BRCA2P51587 3418 aa16.64■□□□□ 0.25
VAMP1-207ENST00000539047 TTC26A0AVF1 554 aa16.63■□□□□ 0.25
VAMP1-207ENST00000539047 LACTBL1A8MY62 500 aa16.63■□□□□ 0.25
VAMP1-207ENST00000539047 UCHL3P15374 230 aa16.63■□□□□ 0.25
VAMP1-207ENST00000539047 SLC9A1P19634 815 aa16.63■□□□□ 0.25
VAMP1-207ENST00000539047 ADKP55263 362 aaKnown RBP16.63■□□□□ 0.25
VAMP1-207ENST00000539047 RAPGEF1Q13905 1077 aa16.63■□□□□ 0.25
VAMP1-207ENST00000539047 UBXN11Q5T124 520 aa16.63■□□□□ 0.25
VAMP1-207ENST00000539047 KLHDC7AQ5VTJ3 777 aa16.63■□□□□ 0.25
VAMP1-207ENST00000539047 JADE1Q6IE81 842 aa16.63■□□□□ 0.25
VAMP1-207ENST00000539047 LRRC8AQ8IWT6 810 aa16.63■□□□□ 0.25
VAMP1-207ENST00000539047 BEST2Q8NFU1 509 aa16.63■□□□□ 0.25
VAMP1-207ENST00000539047 TRAIPQ9BWF2 469 aa16.63■□□□□ 0.25
VAMP1-207ENST00000539047 UBN1Q9NPG3 1134 aa16.63■□□□□ 0.25
VAMP1-207ENST00000539047 ABHD10Q9NUJ1 306 aa16.63■□□□□ 0.25
VAMP1-207ENST00000539047 MYO6Q9UM54 1294 aa16.63■□□□□ 0.25
VAMP1-207ENST00000539047 KIAA0100Q14667 2235 aaKnown RBP16.63■□□□□ 0.25
VAMP1-207ENST00000539047 TDRD15B5MCY1 1934 aaKnown RBP16.62■□□□□ 0.25
VAMP1-207ENST00000539047 HLA-DRAP01903 254 aa16.62■□□□□ 0.25
VAMP1-207ENST00000539047 NFICP08651 508 aa16.62■□□□□ 0.25
VAMP1-207ENST00000539047 CCDC172P0C7W6 258 aa16.62■□□□□ 0.25
VAMP1-207ENST00000539047 RFC2P35250 354 aa16.62■□□□□ 0.25
VAMP1-207ENST00000539047 FXR1P51114 621 aaKnown RBP eCLIP16.62■□□□□ 0.25
VAMP1-207ENST00000539047 MFAP3P55082 362 aa16.62■□□□□ 0.25
VAMP1-207ENST00000539047 FAAP100Q0VG06 881 aa16.62■□□□□ 0.25
VAMP1-207ENST00000539047 NCOA4Q13772 614 aa16.62■□□□□ 0.25
VAMP1-207ENST00000539047 SLC10A6Q3KNW5 377 aa16.62■□□□□ 0.25
VAMP1-207ENST00000539047 TDRD10Q5VZ19 366 aaKnown RBP16.62■□□□□ 0.25
VAMP1-207ENST00000539047 C15orf39Q6ZRI6 1047 aa16.62■□□□□ 0.25
VAMP1-207ENST00000539047 RRAGAQ7L523 313 aa16.62■□□□□ 0.25
VAMP1-207ENST00000539047 ENOSF1Q7L5Y1 443 aa16.62■□□□□ 0.25
VAMP1-207ENST00000539047 TMEM192Q8IY95 271 aa16.62■□□□□ 0.25
VAMP1-207ENST00000539047 TAS1R2Q8TE23 839 aa16.62■□□□□ 0.25
VAMP1-207ENST00000539047 BAG1Q99933 345 aaPredicted RBP16.62■□□□□ 0.25
VAMP1-207ENST00000539047 ADAM2Q99965 735 aa16.62■□□□□ 0.25
VAMP1-207ENST00000539047 TTYH3Q9C0H2 523 aa16.62■□□□□ 0.25
VAMP1-207ENST00000539047 GANQ9H2C0 597 aa16.62■□□□□ 0.25
VAMP1-207ENST00000539047 NLRC4Q9NPP4 1024 aa16.62■□□□□ 0.25
VAMP1-207ENST00000539047 CNTN3Q9P232 1028 aa16.62■□□□□ 0.25
VAMP1-207ENST00000539047 ITGA11Q9UKX5 1188 aa16.62■□□□□ 0.25
VAMP1-207ENST00000539047 C4BPAP04003 597 aaKnown RBP16.61■□□□□ 0.25
VAMP1-207ENST00000539047 KRT19P08727 400 aa16.61■□□□□ 0.25
VAMP1-207ENST00000539047 ACTN1P12814 892 aa16.61■□□□□ 0.25
VAMP1-207ENST00000539047 EN2P19622 333 aaPredicted RBP16.61■□□□□ 0.25
VAMP1-207ENST00000539047 TBXAS1P24557 533 aaPredicted RBP16.61■□□□□ 0.25
VAMP1-207ENST00000539047 DSC3Q14574 896 aa16.61■□□□□ 0.25
VAMP1-207ENST00000539047 SFMBT2Q5VUG0 894 aa16.61■□□□□ 0.25
VAMP1-207ENST00000539047 PDXDC1Q6P996 788 aa16.61■□□□□ 0.25
VAMP1-207ENST00000539047 TRAF7Q6Q0C0 670 aa16.61■□□□□ 0.25
VAMP1-207ENST00000539047 TRAPPC11Q7Z392 1133 aa16.61■□□□□ 0.25
VAMP1-207ENST00000539047 EFCAB13Q8IY85 973 aa16.61■□□□□ 0.25
VAMP1-207ENST00000539047 PPM1KQ8N3J5 372 aa16.61■□□□□ 0.25
VAMP1-207ENST00000539047 TC2NQ8N9U0 490 aa16.61■□□□□ 0.25
VAMP1-207ENST00000539047 OR5B17Q8NGF7 314 aa16.61■□□□□ 0.25
VAMP1-207ENST00000539047 TAF4BQ92750 862 aa16.61■□□□□ 0.25
VAMP1-207ENST00000539047 DNAJC7Q99615 494 aa16.61■□□□□ 0.25
VAMP1-207ENST00000539047 PPP1R12CQ9BZL4 782 aa16.61■□□□□ 0.25
VAMP1-207ENST00000539047 SLC38A7Q9NVC3 462 aa16.61■□□□□ 0.25
VAMP1-207ENST00000539047 UBQLN1Q9UMX0 589 aaKnown RBP16.61■□□□□ 0.25
VAMP1-207ENST00000539047 GIT1Q9Y2X7 761 aa16.61■□□□□ 0.25
VAMP1-207ENST00000539047 HES2Q9Y543 173 aa16.61■□□□□ 0.25
VAMP1-207ENST00000539047 FHOD1Q9Y613 1164 aa16.61■□□□□ 0.25
VAMP1-207ENST00000539047 PTPRJQ12913 1337 aa16.61■□□□□ 0.25
VAMP1-207ENST00000539047 SCN5AQ14524 2016 aa16.6■□□□□ 0.25
VAMP1-207ENST00000539047 ZNF623O75123 536 aa16.6■□□□□ 0.25
VAMP1-207ENST00000539047 P4HA1P13674 534 aa16.6■□□□□ 0.25
VAMP1-207ENST00000539047 ATF7P17544 494 aaPredicted RBP16.6■□□□□ 0.25
VAMP1-207ENST00000539047 AKAP5P24588 427 aa16.6■□□□□ 0.25
VAMP1-207ENST00000539047 STAT1P42224 750 aa16.6■□□□□ 0.25
VAMP1-207ENST00000539047 WNT7BP56706 349 aa16.6■□□□□ 0.25
VAMP1-207ENST00000539047 YWHAEP62258 255 aaKnown RBP16.6■□□□□ 0.25
VAMP1-207ENST00000539047 LRMPQ12912 555 aa16.6■□□□□ 0.25
VAMP1-207ENST00000539047 ASIC2Q16515 512 aa16.6■□□□□ 0.25
VAMP1-207ENST00000539047 SGSM1Q2NKQ1 1148 aa16.6■□□□□ 0.25
VAMP1-207ENST00000539047 ZNF699Q32M78 642 aa16.6■□□□□ 0.25
VAMP1-207ENST00000539047 CYP26C1Q6V0L0 522 aa16.6■□□□□ 0.25
VAMP1-207ENST00000539047 SLC24A5Q71RS6 500 aa16.6■□□□□ 0.25
VAMP1-207ENST00000539047 RNF169Q8NCN4 708 aa16.6■□□□□ 0.25
VAMP1-207ENST00000539047 SMG8Q8ND04 991 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms