RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 GORASP1Q9BQQ3 440 aa19.79■□□□□ 0.76
SFSWAP-207ENST00000538548 UBE2TQ9NPD8 197 aaPredicted RBP19.79■□□□□ 0.76
SFSWAP-207ENST00000538548 LRRC4BQ9NT99 713 aa19.79■□□□□ 0.76
SFSWAP-207ENST00000538548 DMAC2Q9NW81 257 aa19.79■□□□□ 0.76
SFSWAP-207ENST00000538548 SFI1A8K8P3 1242 aa19.79■□□□□ 0.76
SFSWAP-207ENST00000538548 USP17L10C9JJH3 530 aa19.79■□□□□ 0.76
SFSWAP-207ENST00000538548 RNF8O76064 485 aa19.79■□□□□ 0.76
SFSWAP-207ENST00000538548 FAM13AO94988 1023 aa19.79■□□□□ 0.76
SFSWAP-207ENST00000538548 CDR2Q01850 454 aa19.79■□□□□ 0.76
SFSWAP-207ENST00000538548 RCN2Q14257 317 aa19.79■□□□□ 0.76
SFSWAP-207ENST00000538548 ZC2HC1CQ53FD0 456 aaPredicted RBP19.79■□□□□ 0.76
SFSWAP-207ENST00000538548 TAF1BQ53T94 588 aaPredicted RBP19.79■□□□□ 0.76
SFSWAP-207ENST00000538548 SNX30Q5VWJ9 437 aa19.79■□□□□ 0.76
SFSWAP-207ENST00000538548 BTBD6Q96KE9 485 aa19.79■□□□□ 0.76
SFSWAP-207ENST00000538548 TMX4Q9H1E5 349 aaPredicted RBP19.79■□□□□ 0.76
SFSWAP-207ENST00000538548 CHST7Q9NS84 486 aa19.79■□□□□ 0.76
SFSWAP-207ENST00000538548 ZFP69BQ9UJL9 534 aa19.79■□□□□ 0.76
SFSWAP-207ENST00000538548 ABHD2P08910 425 aa19.78■□□□□ 0.76
SFSWAP-207ENST00000538548 ADCY8P40145 1251 aa19.78■□□□□ 0.76
SFSWAP-207ENST00000538548 CYP2J2P51589 502 aa19.78■□□□□ 0.76
SFSWAP-207ENST00000538548 TRIP13Q15645 432 aaPredicted RBP19.78■□□□□ 0.76
SFSWAP-207ENST00000538548 GPATCH4Q5T3I0 446 aaKnown RBP19.78■□□□□ 0.76
SFSWAP-207ENST00000538548 CCDC125Q86Z20 511 aa19.78■□□□□ 0.76
SFSWAP-207ENST00000538548 MYCT1Q8N699 235 aa19.78■□□□□ 0.76
SFSWAP-207ENST00000538548 MAIP1Q8WWC4 291 aa19.78■□□□□ 0.76
SFSWAP-207ENST00000538548 FGD4Q96M96 766 aa19.78■□□□□ 0.76
SFSWAP-207ENST00000538548 PCDHB18PQ96TA0 734 aa19.78■□□□□ 0.76
SFSWAP-207ENST00000538548 UBE4BO95155 1302 aa19.78■□□□□ 0.76
SFSWAP-207ENST00000538548 IRF6O14896 467 aa19.78■□□□□ 0.76
SFSWAP-207ENST00000538548 SPAG7O75391 227 aa19.78■□□□□ 0.76
SFSWAP-207ENST00000538548 CYP1A2P05177 515 aa19.78■□□□□ 0.76
SFSWAP-207ENST00000538548 SLC16A2P36021 539 aa19.78■□□□□ 0.76
SFSWAP-207ENST00000538548 SESN3P58005 492 aa19.78■□□□□ 0.76
SFSWAP-207ENST00000538548 CYP4A11Q02928 519 aa19.78■□□□□ 0.76
SFSWAP-207ENST00000538548 BFSP1Q12934 665 aa19.78■□□□□ 0.76
SFSWAP-207ENST00000538548 RINT1Q6NUQ1 792 aa19.78■□□□□ 0.76
SFSWAP-207ENST00000538548 PWWP2AQ96N64 755 aa19.78■□□□□ 0.76
SFSWAP-207ENST00000538548 AGPAT3Q9NRZ7 376 aa19.78■□□□□ 0.76
SFSWAP-207ENST00000538548 SMG5Q9UPR3 1016 aaKnown RBP19.78■□□□□ 0.76
SFSWAP-207ENST00000538548 IGKV6D-41A0A0C4DH26 115 aa19.77■□□□□ 0.76
SFSWAP-207ENST00000538548 C2CD2LO14523 706 aa19.77■□□□□ 0.76
SFSWAP-207ENST00000538548 ARHGAP4P98171 946 aa19.77■□□□□ 0.76
SFSWAP-207ENST00000538548 CUL3Q13618 768 aa19.77■□□□□ 0.76
SFSWAP-207ENST00000538548 ZRSR2Q15696 482 aaKnown RBP19.77■□□□□ 0.76
SFSWAP-207ENST00000538548 BBOF1Q8ND07 529 aa19.77■□□□□ 0.76
SFSWAP-207ENST00000538548 CRYGNQ8WXF5 182 aa19.77■□□□□ 0.76
SFSWAP-207ENST00000538548 UVRAGQ9P2Y5 699 aa19.77■□□□□ 0.76
SFSWAP-207ENST00000538548 POLD1P28340 1107 aa19.77■□□□□ 0.76
SFSWAP-207ENST00000538548 POLE2P56282 527 aa19.77■□□□□ 0.76
SFSWAP-207ENST00000538548 LLGL1Q15334 1064 aa19.77■□□□□ 0.76
SFSWAP-207ENST00000538548 Q4G0T1 1027 aa19.77■□□□□ 0.76
SFSWAP-207ENST00000538548 PHC3Q8NDX5 983 aa19.77■□□□□ 0.76
SFSWAP-207ENST00000538548 SCG3Q8WXD2 468 aaKnown RBP19.77■□□□□ 0.76
SFSWAP-207ENST00000538548 ATG4AQ8WYN0 398 aa19.77■□□□□ 0.76
SFSWAP-207ENST00000538548 C9orf72Q96LT7 481 aa19.77■□□□□ 0.76
SFSWAP-207ENST00000538548 MIPEPQ99797 713 aa19.77■□□□□ 0.76
SFSWAP-207ENST00000538548 POLR3CQ9BUI4 534 aaPredicted RBP19.77■□□□□ 0.76
SFSWAP-207ENST00000538548 GTF3C4Q9UKN8 822 aa19.77■□□□□ 0.76
SFSWAP-207ENST00000538548 TRPC5Q9UL62 973 aaPredicted RBP19.77■□□□□ 0.76
SFSWAP-207ENST00000538548 ATP9AO75110 1047 aa19.76■□□□□ 0.75
SFSWAP-207ENST00000538548 AP3B2Q13367 1082 aa19.76■□□□□ 0.75
SFSWAP-207ENST00000538548 RCN1Q15293 331 aa19.76■□□□□ 0.75
SFSWAP-207ENST00000538548 RBM26Q5T8P6 1007 aaKnown RBP19.76■□□□□ 0.75
SFSWAP-207ENST00000538548 FOXB2Q5VYV0 432 aa19.76■□□□□ 0.75
SFSWAP-207ENST00000538548 NLRP9Q7RTR0 991 aa19.76■□□□□ 0.75
SFSWAP-207ENST00000538548 CLEC10AQ8IUN9 316 aa19.76■□□□□ 0.75
SFSWAP-207ENST00000538548 KCTD17Q8N5Z5 321 aa19.76■□□□□ 0.75
SFSWAP-207ENST00000538548 ITFG2Q969R8 447 aa19.76■□□□□ 0.75
SFSWAP-207ENST00000538548 FAM20AQ96MK3 541 aa19.76■□□□□ 0.75
SFSWAP-207ENST00000538548 TIPINQ9BVW5 301 aa19.76■□□□□ 0.75
SFSWAP-207ENST00000538548 CYLDQ9NQC7 956 aa19.76■□□□□ 0.75
SFSWAP-207ENST00000538548 GSTTP1A0A1W2PQM5 241 aa19.76■□□□□ 0.75
SFSWAP-207ENST00000538548 AKR1B1P15121 316 aa19.76■□□□□ 0.75
SFSWAP-207ENST00000538548 DYNC1I2Q13409 638 aaKnown RBP19.76■□□□□ 0.75
SFSWAP-207ENST00000538548 RFWD3Q6PCD5 774 aa19.76■□□□□ 0.75
SFSWAP-207ENST00000538548 CLNKQ7Z7G1 428 aa19.76■□□□□ 0.75
SFSWAP-207ENST00000538548 ATL2Q8NHH9 583 aa19.76■□□□□ 0.75
SFSWAP-207ENST00000538548 ZNF398Q8TD17 642 aa19.76■□□□□ 0.75
SFSWAP-207ENST00000538548 EPS8L1Q8TE68 723 aa19.76■□□□□ 0.75
SFSWAP-207ENST00000538548 LENG9Q96B70 501 aa19.76■□□□□ 0.75
SFSWAP-207ENST00000538548 EPAS1Q99814 870 aa19.76■□□□□ 0.75
SFSWAP-207ENST00000538548 TRABDQ9H4I3 376 aa19.76■□□□□ 0.75
SFSWAP-207ENST00000538548 PARVGQ9HBI0 331 aa19.76■□□□□ 0.75
SFSWAP-207ENST00000538548 SENP1Q9P0U3 644 aa19.76■□□□□ 0.75
SFSWAP-207ENST00000538548 GRID1Q9ULK0 1009 aa19.76■□□□□ 0.75
SFSWAP-207ENST00000538548 EXOC1LA0A1B0GW35 172 aa19.75■□□□□ 0.75
SFSWAP-207ENST00000538548 EXOC3O60645 756 aa19.75■□□□□ 0.75
SFSWAP-207ENST00000538548 CCDC22O60826 627 aa19.75■□□□□ 0.75
SFSWAP-207ENST00000538548 KCNA3P22001 575 aa19.75■□□□□ 0.75
SFSWAP-207ENST00000538548 RHBDL3P58872 404 aa19.75■□□□□ 0.75
SFSWAP-207ENST00000538548 CETN1Q12798 172 aa19.75■□□□□ 0.75
SFSWAP-207ENST00000538548 CTC1Q2NKJ3 1217 aa19.75■□□□□ 0.75
SFSWAP-207ENST00000538548 FAM196AQ6ZSG2 479 aa19.75■□□□□ 0.75
SFSWAP-207ENST00000538548 SESTD1Q86VW0 696 aa19.75■□□□□ 0.75
SFSWAP-207ENST00000538548 ARHGEF19Q8IW93 802 aa19.75■□□□□ 0.75
SFSWAP-207ENST00000538548 NRG4Q8WWG1 115 aa19.75■□□□□ 0.75
SFSWAP-207ENST00000538548 EZH1Q92800 747 aaPredicted RBP19.75■□□□□ 0.75
SFSWAP-207ENST00000538548 ARHGEF1Q92888 912 aaKnown RBP19.75■□□□□ 0.75
SFSWAP-207ENST00000538548 CADM1Q9BY67 442 aaKnown RBP19.75■□□□□ 0.75
SFSWAP-207ENST00000538548 DCLK3Q9C098 648 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms