RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 FRMPD4Q14CM0 1322 aa12.5□□□□□ -0.41
CHRNB1-202ENST00000536404 VCANP13611 3396 aa12.49□□□□□ -0.41
CHRNB1-202ENST00000536404 SPATA31C2B4DYI2 1134 aa12.49□□□□□ -0.41
CHRNB1-202ENST00000536404 CCDC188H7C350 402 aa12.49□□□□□ -0.41
CHRNB1-202ENST00000536404 MEIS2O14770 477 aa12.49□□□□□ -0.41
CHRNB1-202ENST00000536404 MYZAPP0CAP1 466 aa12.49□□□□□ -0.41
CHRNB1-202ENST00000536404 ICAM3P32942 547 aa12.49□□□□□ -0.41
CHRNB1-202ENST00000536404 MDH1P40925 334 aaKnown RBP12.49□□□□□ -0.41
CHRNB1-202ENST00000536404 PTK7Q13308 1070 aa12.49□□□□□ -0.41
CHRNB1-202ENST00000536404 GRB10Q13322 594 aa12.49□□□□□ -0.41
CHRNB1-202ENST00000536404 SNCBQ16143 134 aa12.49□□□□□ -0.41
CHRNB1-202ENST00000536404 ASIC2Q16515 512 aa12.49□□□□□ -0.41
CHRNB1-202ENST00000536404 SPDYCQ5MJ68 293 aa12.49□□□□□ -0.41
CHRNB1-202ENST00000536404 LRRC55Q6ZSA7 311 aa12.49□□□□□ -0.41
CHRNB1-202ENST00000536404 TMCO2Q7Z6W1 182 aaPredicted RBP12.49□□□□□ -0.41
CHRNB1-202ENST00000536404 PHOSPHO2Q8TCD6 241 aa12.49□□□□□ -0.41
CHRNB1-202ENST00000536404 ARL8AQ96BM9 186 aa12.49□□□□□ -0.41
CHRNB1-202ENST00000536404 INPP4AQ96PE3 977 aaPredicted RBP12.49□□□□□ -0.41
CHRNB1-202ENST00000536404 MTMR9Q96QG7 549 aa12.49□□□□□ -0.41
CHRNB1-202ENST00000536404 SLC9A7Q96T83 725 aa12.49□□□□□ -0.41
CHRNB1-202ENST00000536404 ISCUQ9H1K1 167 aa12.49□□□□□ -0.41
CHRNB1-202ENST00000536404 KLC4Q9NSK0 619 aa12.49□□□□□ -0.41
CHRNB1-202ENST00000536404 IRAK4Q9NWZ3 460 aa12.49□□□□□ -0.41
CHRNB1-202ENST00000536404 AIPL1Q9NZN9 384 aa12.49□□□□□ -0.41
CHRNB1-202ENST00000536404 REV3LO60673 3130 aa12.49□□□□□ -0.41
CHRNB1-202ENST00000536404 EPOPA6NHQ4 379 aa12.48□□□□□ -0.41
CHRNB1-202ENST00000536404 MYMKA6NI61 221 aa12.48□□□□□ -0.41
CHRNB1-202ENST00000536404 FAM107AO95990 144 aa12.48□□□□□ -0.41
CHRNB1-202ENST00000536404 CXCL10P02778 98 aa12.48□□□□□ -0.41
CHRNB1-202ENST00000536404 MAGEA8P43361 318 aa12.48□□□□□ -0.41
CHRNB1-202ENST00000536404 FNTAP49354 379 aa12.48□□□□□ -0.41
CHRNB1-202ENST00000536404 GFPT1Q06210 699 aaPredicted RBP12.48□□□□□ -0.41
CHRNB1-202ENST00000536404 PDCLQ13371 301 aa12.48□□□□□ -0.41
CHRNB1-202ENST00000536404 RPS6KA1Q15418 735 aa12.48□□□□□ -0.41
CHRNB1-202ENST00000536404 PPP2R5EQ16537 467 aa12.48□□□□□ -0.41
CHRNB1-202ENST00000536404 TMEM119Q4V9L6 283 aa12.48□□□□□ -0.41
CHRNB1-202ENST00000536404 ZNF618Q5T7W0 954 aa12.48□□□□□ -0.41
CHRNB1-202ENST00000536404 HGSNATQ68CP4 663 aa12.48□□□□□ -0.41
CHRNB1-202ENST00000536404 CYFIP1Q7L576 1253 aa12.48□□□□□ -0.41
CHRNB1-202ENST00000536404 VPS36Q86VN1 386 aa12.48□□□□□ -0.41
CHRNB1-202ENST00000536404 CCDC65Q8IXS2 484 aa12.48□□□□□ -0.41
CHRNB1-202ENST00000536404 DRAXINQ8NBI3 349 aaPredicted RBP12.48□□□□□ -0.41
CHRNB1-202ENST00000536404 TBCKQ8TEA7 893 aa12.48□□□□□ -0.41
CHRNB1-202ENST00000536404 IFT81Q8WYA0 676 aa12.48□□□□□ -0.41
CHRNB1-202ENST00000536404 BORCS6Q96GS4 357 aa12.48□□□□□ -0.41
CHRNB1-202ENST00000536404 MMTAG2Q9BU76 263 aaKnown RBP12.48□□□□□ -0.41
CHRNB1-202ENST00000536404 NFU1Q9UMS0 254 aa12.48□□□□□ -0.41
CHRNB1-202ENST00000536404 STK24Q9Y6E0 443 aa12.48□□□□□ -0.41
CHRNB1-202ENST00000536404 SPTBN5Q9NRC6 3674 aaKnown RBP12.48□□□□□ -0.41
CHRNB1-202ENST00000536404 H3BRB1 525 aa12.48□□□□□ -0.41
CHRNB1-202ENST00000536404 ADAMTS3O15072 1205 aa12.48□□□□□ -0.41
CHRNB1-202ENST00000536404 PALMO75781 387 aa12.48□□□□□ -0.41
CHRNB1-202ENST00000536404 BAIAP3O94812 1187 aa12.48□□□□□ -0.41
CHRNB1-202ENST00000536404 LGALS2P05162 132 aa12.48□□□□□ -0.41
CHRNB1-202ENST00000536404 MYBP10242 640 aa12.48□□□□□ -0.41
CHRNB1-202ENST00000536404 TXKP42681 527 aa12.48□□□□□ -0.41
CHRNB1-202ENST00000536404 ADCY7P51828 1080 aa12.48□□□□□ -0.41
CHRNB1-202ENST00000536404 WDR5P61964 334 aaKnown RBP12.48□□□□□ -0.41
CHRNB1-202ENST00000536404 DEFB103AP81534 67 aa12.48□□□□□ -0.41
CHRNB1-202ENST00000536404 EHHADHQ08426 723 aa12.48□□□□□ -0.41
CHRNB1-202ENST00000536404 KLHL30Q0D2K2 578 aa12.48□□□□□ -0.41
CHRNB1-202ENST00000536404 MBTPS1Q14703 1052 aa12.48□□□□□ -0.41
CHRNB1-202ENST00000536404 GNPTABQ3T906 1256 aa12.48□□□□□ -0.41
CHRNB1-202ENST00000536404 AGBL2Q5U5Z8 902 aa12.48□□□□□ -0.41
CHRNB1-202ENST00000536404 NAA35Q5VZE5 725 aa12.48□□□□□ -0.41
CHRNB1-202ENST00000536404 MAATS1Q7Z4T9 603 aa12.48□□□□□ -0.41
CHRNB1-202ENST00000536404 SPRED2Q7Z698 418 aa12.48□□□□□ -0.41
CHRNB1-202ENST00000536404 NLRP14Q86W24 1093 aa12.48□□□□□ -0.41
CHRNB1-202ENST00000536404 APLFQ8IW19 511 aaPredicted RBP12.48□□□□□ -0.41
CHRNB1-202ENST00000536404 SYCE1Q8N0S2 351 aa12.48□□□□□ -0.41
CHRNB1-202ENST00000536404 ZNF513Q8N8E2 541 aaPredicted RBP12.48□□□□□ -0.41
CHRNB1-202ENST00000536404 ACTRT1Q8TDG2 376 aa12.48□□□□□ -0.41
CHRNB1-202ENST00000536404 MICAL1Q8TDZ2 1067 aa12.48□□□□□ -0.41
CHRNB1-202ENST00000536404 ZNF473Q8WTR7 871 aaKnown RBP12.48□□□□□ -0.41
CHRNB1-202ENST00000536404 CUL5Q93034 780 aa12.48□□□□□ -0.41
CHRNB1-202ENST00000536404 GLT8D2Q9H1C3 349 aa12.48□□□□□ -0.41
CHRNB1-202ENST00000536404 TUT1Q9H6E5 874 aaKnown RBP12.48□□□□□ -0.41
CHRNB1-202ENST00000536404 TMBIM4Q9HC24 238 aa12.48□□□□□ -0.41
CHRNB1-202ENST00000536404 BLOC1S4Q9NUP1 217 aa12.48□□□□□ -0.41
CHRNB1-202ENST00000536404 CHCHD3Q9NX63 227 aaKnown RBP12.48□□□□□ -0.41
CHRNB1-202ENST00000536404 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.48□□□□□ -0.41
CHRNB1-202ENST00000536404 DOCK5Q9H7D0 1870 aa12.47□□□□□ -0.41
CHRNB1-202ENST00000536404 C17orf102A2RUQ5 167 aa12.47□□□□□ -0.41
CHRNB1-202ENST00000536404 ANKRD65E5RJM6 399 aa12.47□□□□□ -0.41
CHRNB1-202ENST00000536404 PIK3CDO00329 1044 aa12.47□□□□□ -0.41
CHRNB1-202ENST00000536404 NOP56O00567 594 aaKnown RBP12.47□□□□□ -0.41
CHRNB1-202ENST00000536404 NCK2O43639 380 aa12.47□□□□□ -0.41
CHRNB1-202ENST00000536404 BUB1O43683 1085 aa12.47□□□□□ -0.41
CHRNB1-202ENST00000536404 PPFIA2O75334 1257 aa12.47□□□□□ -0.41
CHRNB1-202ENST00000536404 STAM2O75886 525 aa12.47□□□□□ -0.41
CHRNB1-202ENST00000536404 GLI1P08151 1106 aa12.47□□□□□ -0.41
CHRNB1-202ENST00000536404 SMIM10L2AP0DMW4 78 aa12.47□□□□□ -0.41
CHRNB1-202ENST00000536404 SMIM10L2BP0DMW5 78 aa12.47□□□□□ -0.41
CHRNB1-202ENST00000536404 CXCR5P32302 372 aa12.47□□□□□ -0.41
CHRNB1-202ENST00000536404 CARSP49589 748 aaKnown RBP12.47□□□□□ -0.41
CHRNB1-202ENST00000536404 CCNHP51946 323 aaPredicted RBP12.47□□□□□ -0.41
CHRNB1-202ENST00000536404 TAP1Q03518 808 aa12.47□□□□□ -0.41
CHRNB1-202ENST00000536404 UBE2SQ16763 222 aa12.47□□□□□ -0.41
CHRNB1-202ENST00000536404 EDRF1Q3B7T1 1238 aa12.47□□□□□ -0.41
CHRNB1-202ENST00000536404 PCNX4Q63HM2 1172 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms