RNA–Protein interactions for RNA: ENST00000535565.6

RBFOX1-206, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-206ENST00000535565 OR5B17Q8NGF7 314 aa24.76■■□□□ 1.55
RBFOX1-206ENST00000535565 DIS3LQ8TF46 1054 aaKnown RBP24.76■■□□□ 1.55
RBFOX1-206ENST00000535565 TOX2Q96NM4 488 aa24.76■■□□□ 1.55
RBFOX1-206ENST00000535565 MTMR12Q9C0I1 747 aa24.76■■□□□ 1.55
RBFOX1-206ENST00000535565 TMX1Q9H3N1 280 aa24.76■■□□□ 1.55
RBFOX1-206ENST00000535565 ZKSCAN5Q9Y2L8 839 aa24.76■■□□□ 1.55
RBFOX1-206ENST00000535565 IPPQ9Y573 584 aa24.76■■□□□ 1.55
RBFOX1-206ENST00000535565 PDCD11Q14690 1871 aaKnown RBP24.75■■□□□ 1.55
RBFOX1-206ENST00000535565 TANC1Q9C0D5 1861 aa24.75■■□□□ 1.55
RBFOX1-206ENST00000535565 ZC3H11AO75152 810 aaKnown RBP eCLIP24.75■■□□□ 1.55
RBFOX1-206ENST00000535565 TRAF7Q6Q0C0 670 aa24.75■■□□□ 1.55
RBFOX1-206ENST00000535565 EFCAB13Q8IY85 973 aa24.75■■□□□ 1.55
RBFOX1-206ENST00000535565 BAP1Q92560 729 aa24.75■■□□□ 1.55
RBFOX1-206ENST00000535565 SPAG5Q96R06 1193 aa24.75■■□□□ 1.55
RBFOX1-206ENST00000535565 C11orf49Q9H6J7 331 aa24.75■■□□□ 1.55
RBFOX1-206ENST00000535565 HES2Q9Y543 173 aa24.75■■□□□ 1.55
RBFOX1-206ENST00000535565 FHOD1Q9Y613 1164 aa24.75■■□□□ 1.55
RBFOX1-206ENST00000535565 LRRC53A6NM62 1247 aa24.74■■□□□ 1.55
RBFOX1-206ENST00000535565 RECQL4O94761 1208 aa24.74■■□□□ 1.55
RBFOX1-206ENST00000535565 HLA-DRAP01903 254 aa24.74■■□□□ 1.55
RBFOX1-206ENST00000535565 TMEM132DQ14C87 1099 aa24.74■■□□□ 1.55
RBFOX1-206ENST00000535565 WDR44Q5JSH3 913 aa24.74■■□□□ 1.55
RBFOX1-206ENST00000535565 JADE1Q6IE81 842 aa24.74■■□□□ 1.55
RBFOX1-206ENST00000535565 PDXDC1Q6P996 788 aa24.74■■□□□ 1.55
RBFOX1-206ENST00000535565 TRAPPC11Q7Z392 1133 aa24.74■■□□□ 1.55
RBFOX1-206ENST00000535565 SEMA4DQ92854 862 aa24.74■■□□□ 1.55
RBFOX1-206ENST00000535565 SNX27Q96L92 541 aa24.74■■□□□ 1.55
RBFOX1-206ENST00000535565 NT5C1BQ96P26 610 aa24.74■■□□□ 1.55
RBFOX1-206ENST00000535565 APOL6Q9BWW8 343 aa24.74■■□□□ 1.55
RBFOX1-206ENST00000535565 FAM105AQ9NUU6 356 aa24.74■■□□□ 1.55
RBFOX1-206ENST00000535565 MYO6Q9UM54 1294 aa24.74■■□□□ 1.55
RBFOX1-206ENST00000535565 C2CD2Q9Y426 696 aa24.74■■□□□ 1.55
RBFOX1-206ENST00000535565 PCDHB2Q9Y5E7 798 aa24.74■■□□□ 1.55
RBFOX1-206ENST00000535565 NFICP08651 508 aa24.73■■□□□ 1.55
RBFOX1-206ENST00000535565 RAB27AP51159 221 aa24.73■■□□□ 1.55
RBFOX1-206ENST00000535565 RAPGEF1Q13905 1077 aa24.73■■□□□ 1.55
RBFOX1-206ENST00000535565 TRIM60Q495X7 471 aa24.73■■□□□ 1.55
RBFOX1-206ENST00000535565 IQCEQ6IPM2 695 aa24.73■■□□□ 1.55
RBFOX1-206ENST00000535565 FAM84AQ96KN4 292 aa24.73■■□□□ 1.55
RBFOX1-206ENST00000535565 OSBPL7Q9BZF2 842 aa24.73■■□□□ 1.55
RBFOX1-206ENST00000535565 IMPG2Q9BZV3 1241 aa24.73■■□□□ 1.55
RBFOX1-206ENST00000535565 PARP2Q9UGN5 583 aa24.73■■□□□ 1.55
RBFOX1-206ENST00000535565 DNAJC12Q9UKB3 198 aa24.73■■□□□ 1.55
RBFOX1-206ENST00000535565 DERAQ9Y315 318 aa24.73■■□□□ 1.55
RBFOX1-206ENST00000535565 MEFVO15553 781 aaPredicted RBP24.72■■□□□ 1.55
RBFOX1-206ENST00000535565 NCOA4Q13772 614 aa24.72■■□□□ 1.55
RBFOX1-206ENST00000535565 PHLDB3Q6NSJ2 640 aa24.72■■□□□ 1.55
RBFOX1-206ENST00000535565 ZSCAN30Q86W11 494 aa24.72■■□□□ 1.55
RBFOX1-206ENST00000535565 TMEM139Q8IV31 216 aa24.72■■□□□ 1.55
RBFOX1-206ENST00000535565 SMG8Q8ND04 991 aaKnown RBP24.72■■□□□ 1.55
RBFOX1-206ENST00000535565 SYN2Q92777 582 aaPredicted RBP24.72■■□□□ 1.55
RBFOX1-206ENST00000535565 FAM81BQ96LP2 452 aa24.72■■□□□ 1.55
RBFOX1-206ENST00000535565 TRAIPQ9BWF2 469 aa24.72■■□□□ 1.55
RBFOX1-206ENST00000535565 IFIH1Q9BYX4 1025 aaKnown RBP24.72■■□□□ 1.55
RBFOX1-206ENST00000535565 MCOLN1Q9GZU1 580 aa24.72■■□□□ 1.55
RBFOX1-206ENST00000535565 C1orf112Q9NSG2 853 aa24.72■■□□□ 1.55
RBFOX1-206ENST00000535565 PLAGL2Q9UPG8 496 aa24.72■■□□□ 1.55
RBFOX1-206ENST00000535565 VNN1O95497 513 aa24.71■■□□□ 1.55
RBFOX1-206ENST00000535565 FECHP22830 423 aa24.71■■□□□ 1.55
RBFOX1-206ENST00000535565 HNRNPH3P31942 346 aaKnown RBP24.71■■□□□ 1.55
RBFOX1-206ENST00000535565 TLE2Q04725 743 aa24.71■■□□□ 1.55
RBFOX1-206ENST00000535565 TRPC3Q13507 836 aa24.71■■□□□ 1.55
RBFOX1-206ENST00000535565 MBTPS1Q14703 1052 aa24.71■■□□□ 1.55
RBFOX1-206ENST00000535565 SFMBT2Q5VUG0 894 aa24.71■■□□□ 1.55
RBFOX1-206ENST00000535565 GJB7Q6PEY0 223 aa24.71■■□□□ 1.55
RBFOX1-206ENST00000535565 CYP26C1Q6V0L0 522 aa24.71■■□□□ 1.55
RBFOX1-206ENST00000535565 TMTC1Q8IUR5 882 aa24.71■■□□□ 1.55
RBFOX1-206ENST00000535565 FMNL3Q8IVF7 1028 aa24.71■■□□□ 1.55
RBFOX1-206ENST00000535565 KIF12Q96FN5 646 aa24.71■■□□□ 1.55
RBFOX1-206ENST00000535565 PAWRQ96IZ0 340 aaKnown RBP24.71■■□□□ 1.55
RBFOX1-206ENST00000535565 TSPAN18Q96SJ8 248 aa24.71■■□□□ 1.55
RBFOX1-206ENST00000535565 STK33Q9BYT3 514 aa24.71■■□□□ 1.55
RBFOX1-206ENST00000535565 UBE2TQ9NPD8 197 aaPredicted RBP24.71■■□□□ 1.55
RBFOX1-206ENST00000535565 ARHGAP6O43182 974 aa24.71■■□□□ 1.55
RBFOX1-206ENST00000535565 CLSTN1O94985 981 aa24.71■■□□□ 1.55
RBFOX1-206ENST00000535565 SKIP12755 728 aa24.71■■□□□ 1.55
RBFOX1-206ENST00000535565 AKAP5P24588 427 aa24.71■■□□□ 1.55
RBFOX1-206ENST00000535565 DSC3Q14574 896 aa24.71■■□□□ 1.55
RBFOX1-206ENST00000535565 MEA1Q16626 185 aa24.71■■□□□ 1.55
RBFOX1-206ENST00000535565 PPM1KQ8N3J5 372 aa24.71■■□□□ 1.55
RBFOX1-206ENST00000535565 HIPK3Q9H422 1215 aa24.71■■□□□ 1.55
RBFOX1-206ENST00000535565 CNTN3Q9P232 1028 aa24.71■■□□□ 1.55
RBFOX1-206ENST00000535565 ATP11BQ9Y2G3 1177 aa24.71■■□□□ 1.55
RBFOX1-206ENST00000535565 LRRN2O75325 713 aa24.7■■□□□ 1.54
RBFOX1-206ENST00000535565 ITGA4P13612 1032 aa24.7■■□□□ 1.54
RBFOX1-206ENST00000535565 MFAP3P55082 362 aa24.7■■□□□ 1.54
RBFOX1-206ENST00000535565 FAAP100Q0VG06 881 aa24.7■■□□□ 1.54
RBFOX1-206ENST00000535565 NECAB2Q7Z6G3 386 aa24.7■■□□□ 1.54
RBFOX1-206ENST00000535565 ARHGEF19Q8IW93 802 aa24.7■■□□□ 1.54
RBFOX1-206ENST00000535565 ADAM2Q99965 735 aa24.7■■□□□ 1.54
RBFOX1-206ENST00000535565 R3HCC1Q9Y3T6 440 aaKnown RBP24.7■■□□□ 1.54
RBFOX1-206ENST00000535565 PARNO95453 639 aaKnown RBP24.69■■□□□ 1.54
RBFOX1-206ENST00000535565 MSNP26038 577 aaKnown RBP24.69■■□□□ 1.54
RBFOX1-206ENST00000535565 JAM2P57087 298 aa24.69■■□□□ 1.54
RBFOX1-206ENST00000535565 ALKAL1Q6UXT8 129 aa24.69■■□□□ 1.54
RBFOX1-206ENST00000535565 FAM43BQ6ZT52 329 aaPredicted RBP24.69■■□□□ 1.54
RBFOX1-206ENST00000535565 PI4K2AQ9BTU6 479 aa24.69■■□□□ 1.54
RBFOX1-206ENST00000535565 FTHL17Q9BXU8 183 aa24.69■■□□□ 1.54
RBFOX1-206ENST00000535565 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.69■■□□□ 1.54
RBFOX1-206ENST00000535565 AJAP1Q9UKB5 411 aaPredicted RBP24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms