RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 ARID2Q68CP9 1835 aa9.76□□□□□ -0.85
COPB1-211ENST00000534234 MUC6Q6W4X9 2439 aa9.76□□□□□ -0.85
COPB1-211ENST00000534234 NPHP3-ACAD11A0A0J9YXS1 232 aa9.75□□□□□ -0.85
COPB1-211ENST00000534234 I3L4J1 428 aa9.75□□□□□ -0.85
COPB1-211ENST00000534234 ABLIM1O14639 778 aa9.75□□□□□ -0.85
COPB1-211ENST00000534234 TOM1L1O75674 476 aa9.75□□□□□ -0.85
COPB1-211ENST00000534234 HNRNPA1P09651 372 aaKnown RBP eCLIP9.75□□□□□ -0.85
COPB1-211ENST00000534234 HARSP12081 509 aaKnown RBP9.75□□□□□ -0.85
COPB1-211ENST00000534234 LAMP2P13473 410 aa9.75□□□□□ -0.85
COPB1-211ENST00000534234 BRCC3P46736 316 aa9.75□□□□□ -0.85
COPB1-211ENST00000534234 NUBP1P53384 320 aa9.75□□□□□ -0.85
COPB1-211ENST00000534234 SOX4Q06945 474 aaPredicted RBP9.75□□□□□ -0.85
COPB1-211ENST00000534234 RAB33AQ14088 237 aa9.75□□□□□ -0.85
COPB1-211ENST00000534234 TMEM119Q4V9L6 283 aa9.75□□□□□ -0.85
COPB1-211ENST00000534234 ARSHQ5FYA8 562 aa9.75□□□□□ -0.85
COPB1-211ENST00000534234 PPM1LQ5SGD2 360 aa9.75□□□□□ -0.85
COPB1-211ENST00000534234 LIN9Q5TKA1 542 aa9.75□□□□□ -0.85
COPB1-211ENST00000534234 C3orf58Q8NDZ4 430 aa9.75□□□□□ -0.85
COPB1-211ENST00000534234 CALML4Q96GE6 196 aa9.75□□□□□ -0.85
COPB1-211ENST00000534234 ZMAT2Q96NC0 199 aaKnown RBP9.75□□□□□ -0.85
COPB1-211ENST00000534234 LARSQ9P2J5 1176 aaKnown RBP9.75□□□□□ -0.85
COPB1-211ENST00000534234 EPS15L1Q9UBC2 864 aa9.75□□□□□ -0.85
COPB1-211ENST00000534234 TRIOO75962 3097 aa9.75□□□□□ -0.85
COPB1-211ENST00000534234 CLDN3O15551 220 aa9.75□□□□□ -0.85
COPB1-211ENST00000534234 BMP15O95972 392 aa9.75□□□□□ -0.85
COPB1-211ENST00000534234 C8AP07357 584 aa9.75□□□□□ -0.85
COPB1-211ENST00000534234 MAPTP10636 758 aaKnown RBP9.75□□□□□ -0.85
COPB1-211ENST00000534234 KCNE1P15382 129 aa9.75□□□□□ -0.85
COPB1-211ENST00000534234 TKTP29401 623 aaKnown RBP9.75□□□□□ -0.85
COPB1-211ENST00000534234 RPL9P32969 192 aaKnown RBP9.75□□□□□ -0.85
COPB1-211ENST00000534234 CLCN5P51795 746 aa9.75□□□□□ -0.85
COPB1-211ENST00000534234 DHX8Q14562 1220 aaKnown RBP9.75□□□□□ -0.85
COPB1-211ENST00000534234 UVSSAQ2YD98 709 aa9.75□□□□□ -0.85
COPB1-211ENST00000534234 SEZ6Q53EL9 994 aa9.75□□□□□ -0.85
COPB1-211ENST00000534234 AXDND1Q5T1B0 1012 aaPredicted RBP9.75□□□□□ -0.85
COPB1-211ENST00000534234 ASTLQ6HA08 431 aaPredicted RBP9.75□□□□□ -0.85
COPB1-211ENST00000534234 RSPO2Q6UXX9 243 aaPredicted RBP9.75□□□□□ -0.85
COPB1-211ENST00000534234 ZPBP2Q6X784 338 aa9.75□□□□□ -0.85
COPB1-211ENST00000534234 ANKS3Q6ZW76 656 aa9.75□□□□□ -0.85
COPB1-211ENST00000534234 GET4Q7L5D6 327 aaPredicted RBP9.75□□□□□ -0.85
COPB1-211ENST00000534234 BRAPQ7Z569 592 aa9.75□□□□□ -0.85
COPB1-211ENST00000534234 GRASPQ7Z6J2 395 aaPredicted RBP9.75□□□□□ -0.85
COPB1-211ENST00000534234 SLC44A3Q8N4M1 653 aa9.75□□□□□ -0.85
COPB1-211ENST00000534234 TMEM105Q8N8V8 129 aa9.75□□□□□ -0.85
COPB1-211ENST00000534234 FLCNQ8NFG4 579 aa9.75□□□□□ -0.85
COPB1-211ENST00000534234 NXPE3Q969Y0 559 aa9.75□□□□□ -0.85
COPB1-211ENST00000534234 SNX27Q96L92 541 aa9.75□□□□□ -0.85
COPB1-211ENST00000534234 PHOX2BQ99453 314 aa9.75□□□□□ -0.85
COPB1-211ENST00000534234 IRF2BPLQ9H1B7 796 aa9.75□□□□□ -0.85
COPB1-211ENST00000534234 ANKFY1Q9P2R3 1169 aa9.75□□□□□ -0.85
COPB1-211ENST00000534234 MTRRQ9UBK8 725 aa9.75□□□□□ -0.85
COPB1-211ENST00000534234 FBXL21Q9UKT6 434 aa9.75□□□□□ -0.85
COPB1-211ENST00000534234 POLIQ9UNA4 740 aa9.75□□□□□ -0.85
COPB1-211ENST00000534234 DUSP12Q9UNI6 340 aa9.75□□□□□ -0.85
COPB1-211ENST00000534234 BACE2Q9Y5Z0 518 aa9.75□□□□□ -0.85
COPB1-211ENST00000534234 CDY1Q9Y6F8 540 aa9.75□□□□□ -0.85
COPB1-211ENST00000534234 H0Y858 1186 aa9.74□□□□□ -0.85
COPB1-211ENST00000534234 H0YCG3 227 aa9.74□□□□□ -0.85
COPB1-211ENST00000534234 PODXLO00592 558 aa9.74□□□□□ -0.85
COPB1-211ENST00000534234 CCL16O15467 120 aa9.74□□□□□ -0.85
COPB1-211ENST00000534234 SLC26A4O43511 780 aa9.74□□□□□ -0.85
COPB1-211ENST00000534234 NARSO43776 548 aaKnown RBP9.74□□□□□ -0.85
COPB1-211ENST00000534234 XYLBO75191 536 aa9.74□□□□□ -0.85
COPB1-211ENST00000534234 FSHRP23945 695 aa9.74□□□□□ -0.85
COPB1-211ENST00000534234 HOXA9P31269 272 aa9.74□□□□□ -0.85
COPB1-211ENST00000534234 MATR3P43243 847 aaKnown RBP eCLIP9.74□□□□□ -0.85
COPB1-211ENST00000534234 NTHL1P78549 312 aa9.74□□□□□ -0.85
COPB1-211ENST00000534234 NOLC1Q14978 699 aaKnown RBP eCLIP9.74□□□□□ -0.85
COPB1-211ENST00000534234 SF3A1Q15459 793 aaKnown RBP9.74□□□□□ -0.85
COPB1-211ENST00000534234 SLC10A6Q3KNW5 377 aa9.74□□□□□ -0.85
COPB1-211ENST00000534234 HAUS6Q7Z4H7 955 aa9.74□□□□□ -0.85
COPB1-211ENST00000534234 GPBP1Q86WP2 473 aa9.74□□□□□ -0.85
COPB1-211ENST00000534234 RASSF8Q8NHQ8 419 aa9.74□□□□□ -0.85
COPB1-211ENST00000534234 SLC7A14Q8TBB6 771 aa9.74□□□□□ -0.85
COPB1-211ENST00000534234 ATOH1Q92858 354 aaPredicted RBP9.74□□□□□ -0.85
COPB1-211ENST00000534234 C18orf25Q96B23 403 aaPredicted RBP9.74□□□□□ -0.85
COPB1-211ENST00000534234 BICD1Q96G01 975 aa9.74□□□□□ -0.85
COPB1-211ENST00000534234 CNTN3Q9P232 1028 aa9.74□□□□□ -0.85
COPB1-211ENST00000534234 WNT16Q9UBV4 365 aa9.74□□□□□ -0.85
COPB1-211ENST00000534234 ODF2LQ9ULJ1 636 aa9.74□□□□□ -0.85
COPB1-211ENST00000534234 NUB1Q9Y5A7 615 aa9.74□□□□□ -0.85
COPB1-211ENST00000534234 ZFP37Q9Y6Q3 630 aaPredicted RBP9.74□□□□□ -0.85
COPB1-211ENST00000534234 VPS37CA5D8V6 355 aaPredicted RBP9.73□□□□□ -0.85
COPB1-211ENST00000534234 MEFVO15553 781 aaPredicted RBP9.73□□□□□ -0.85
COPB1-211ENST00000534234 GALR2O43603 387 aaPredicted RBP9.73□□□□□ -0.85
COPB1-211ENST00000534234 CFHP08603 1231 aa9.73□□□□□ -0.85
COPB1-211ENST00000534234 LONP1P36776 959 aaKnown RBP9.73□□□□□ -0.85
COPB1-211ENST00000534234 NCKAP1LP55160 1127 aa9.73□□□□□ -0.85
COPB1-211ENST00000534234 GRIN1Q05586 938 aa9.73□□□□□ -0.85
COPB1-211ENST00000534234 MCL1Q07820 350 aa9.73□□□□□ -0.85
COPB1-211ENST00000534234 CUL4AQ13619 759 aa9.73□□□□□ -0.85
COPB1-211ENST00000534234 KARSQ15046 597 aaKnown RBP9.73□□□□□ -0.85
COPB1-211ENST00000534234 RTL10Q7L3V2 364 aa9.73□□□□□ -0.85
COPB1-211ENST00000534234 SIX5Q8N196 739 aa9.73□□□□□ -0.85
COPB1-211ENST00000534234 MYCT1Q8N699 235 aa9.73□□□□□ -0.85
COPB1-211ENST00000534234 ST13P5Q8NFI4 369 aaPredicted RBP9.73□□□□□ -0.85
COPB1-211ENST00000534234 ZNF461Q8TAF7 563 aa9.73□□□□□ -0.85
COPB1-211ENST00000534234 LRRC15Q8TF66 581 aa9.73□□□□□ -0.85
COPB1-211ENST00000534234 REEP2Q9BRK0 252 aa9.73□□□□□ -0.85
COPB1-211ENST00000534234 BLOC1S4Q9NUP1 217 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms