RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 FERMT2Q96AC1 680 aa8.6□□□□□ -1.03
CASP4-212ENST00000533730 INTS4Q96HW7 963 aaKnown RBP8.6□□□□□ -1.03
CASP4-212ENST00000533730 SDF4Q9BRK5 362 aa8.6□□□□□ -1.03
CASP4-212ENST00000533730 MTG1Q9BT17 334 aaPredicted RBP8.6□□□□□ -1.03
CASP4-212ENST00000533730 KATNAL1Q9BW62 490 aa8.6□□□□□ -1.03
CASP4-212ENST00000533730 TARS2Q9BW92 718 aaKnown RBP8.6□□□□□ -1.03
CASP4-212ENST00000533730 CCDC86Q9H6F5 360 aaKnown RBP8.6□□□□□ -1.03
CASP4-212ENST00000533730 OSGEPQ9NPF4 335 aa8.6□□□□□ -1.03
CASP4-212ENST00000533730 ARHGEF4Q9NR80 690 aa8.6□□□□□ -1.03
CASP4-212ENST00000533730 MRPS23Q9Y3D9 190 aaKnown RBP8.6□□□□□ -1.03
CASP4-212ENST00000533730 IGLV3-22A0A075B6J6 115 aa8.59□□□□□ -1.03
CASP4-212ENST00000533730 CYP3A7-CYP3A51PA0A087WV96 503 aa8.59□□□□□ -1.03
CASP4-212ENST00000533730 DCDC2CA8MYV0 355 aa8.59□□□□□ -1.03
CASP4-212ENST00000533730 FAM86B1E9PN63 330 aa8.59□□□□□ -1.03
CASP4-212ENST00000533730 IPO5O00410 1097 aaKnown RBP8.59□□□□□ -1.03
CASP4-212ENST00000533730 FAM86B2P0C5J1 330 aa8.59□□□□□ -1.03
CASP4-212ENST00000533730 KCNA2P16389 499 aa8.59□□□□□ -1.03
CASP4-212ENST00000533730 PDCP20941 246 aa8.59□□□□□ -1.03
CASP4-212ENST00000533730 CYP3A7P24462 503 aa8.59□□□□□ -1.03
CASP4-212ENST00000533730 POLR2BP30876 1174 aaKnown RBP8.59□□□□□ -1.03
CASP4-212ENST00000533730 CCNFP41002 786 aa8.59□□□□□ -1.03
CASP4-212ENST00000533730 SP2Q02086 613 aa8.59□□□□□ -1.03
CASP4-212ENST00000533730 INF2Q27J81 1249 aa8.59□□□□□ -1.03
CASP4-212ENST00000533730 LRRC26Q2I0M4 334 aa8.59□□□□□ -1.03
CASP4-212ENST00000533730 SV2CQ496J9 727 aa8.59□□□□□ -1.03
CASP4-212ENST00000533730 PRR16Q569H4 304 aa8.59□□□□□ -1.03
CASP4-212ENST00000533730 YOD1Q5VVQ6 348 aaPredicted RBP8.59□□□□□ -1.03
CASP4-212ENST00000533730 PPP4R3AQ6IN85 833 aa8.59□□□□□ -1.03
CASP4-212ENST00000533730 IGF2-ASQ6U949 168 aa8.59□□□□□ -1.03
CASP4-212ENST00000533730 CXCL17Q6UXB2 119 aa8.59□□□□□ -1.03
CASP4-212ENST00000533730 PIK3AP1Q6ZUJ8 805 aa8.59□□□□□ -1.03
CASP4-212ENST00000533730 CYFIP1Q7L576 1253 aa8.59□□□□□ -1.03
CASP4-212ENST00000533730 AFAP1L2Q8N4X5 818 aa8.59□□□□□ -1.03
CASP4-212ENST00000533730 ATL2Q8NHH9 583 aa8.59□□□□□ -1.03
CASP4-212ENST00000533730 ELMO3Q96BJ8 720 aa8.59□□□□□ -1.03
CASP4-212ENST00000533730 KLHDC7BQ96G42 594 aa8.59□□□□□ -1.03
CASP4-212ENST00000533730 TOX2Q96NM4 488 aa8.59□□□□□ -1.03
CASP4-212ENST00000533730 CDC6Q99741 560 aa8.59□□□□□ -1.03
CASP4-212ENST00000533730 DHRS4Q9BTZ2 278 aa8.59□□□□□ -1.03
CASP4-212ENST00000533730 RUSC1Q9BVN2 902 aa8.59□□□□□ -1.03
CASP4-212ENST00000533730 FOXP1Q9H334 677 aaPredicted RBP8.59□□□□□ -1.03
CASP4-212ENST00000533730 AGO4Q9HCK5 861 aaKnown RBP8.59□□□□□ -1.03
CASP4-212ENST00000533730 GJB4Q9NTQ9 266 aa8.59□□□□□ -1.03
CASP4-212ENST00000533730 TBC1D22BQ9NU19 505 aa8.59□□□□□ -1.03
CASP4-212ENST00000533730 SLC9A2Q9UBY0 812 aa8.59□□□□□ -1.03
CASP4-212ENST00000533730 MAPRE3Q9UPY8 281 aa8.59□□□□□ -1.03
CASP4-212ENST00000533730 A0A1W2PQU0 124 aa8.58□□□□□ -1.04
CASP4-212ENST00000533730 C1QTNF9BB2RNN3 333 aa8.58□□□□□ -1.04
CASP4-212ENST00000533730 BTBD18B2RXH4 712 aa8.58□□□□□ -1.04
CASP4-212ENST00000533730 CHURC1-FNTBB4DL54 471 aa8.58□□□□□ -1.04
CASP4-212ENST00000533730 H3BQV1 296 aa8.58□□□□□ -1.04
CASP4-212ENST00000533730 ARVCFO00192 962 aa8.58□□□□□ -1.04
CASP4-212ENST00000533730 ADAMTS3O15072 1205 aa8.58□□□□□ -1.04
CASP4-212ENST00000533730 ARP10275 920 aa8.58□□□□□ -1.04
CASP4-212ENST00000533730 GJB2P29033 226 aa8.58□□□□□ -1.04
CASP4-212ENST00000533730 RTP1P59025 263 aa8.58□□□□□ -1.04
CASP4-212ENST00000533730 ORC2Q13416 577 aaPredicted RBP8.58□□□□□ -1.04
CASP4-212ENST00000533730 ITGA7Q13683 1181 aa8.58□□□□□ -1.04
CASP4-212ENST00000533730 NFE2Q16621 373 aaPredicted RBP8.58□□□□□ -1.04
CASP4-212ENST00000533730 LETM2Q2VYF4 491 aa8.58□□□□□ -1.04
CASP4-212ENST00000533730 HSDL1Q3SXM5 330 aa8.58□□□□□ -1.04
CASP4-212ENST00000533730 FOXD4L6Q3SYB3 417 aaPredicted RBP8.58□□□□□ -1.04
CASP4-212ENST00000533730 Q4G0T1 1027 aa8.58□□□□□ -1.04
CASP4-212ENST00000533730 FNDC3BQ53EP0 1204 aaKnown RBP8.58□□□□□ -1.04
CASP4-212ENST00000533730 TMEM201Q5SNT2 666 aa8.58□□□□□ -1.04
CASP4-212ENST00000533730 FAM117BQ6P1L5 589 aa8.58□□□□□ -1.04
CASP4-212ENST00000533730 CNNM4Q6P4Q7 775 aa8.58□□□□□ -1.04
CASP4-212ENST00000533730 NFRKBQ6P4R8 1299 aa8.58□□□□□ -1.04
CASP4-212ENST00000533730 FOXD4L3Q6VB84 417 aaPredicted RBP8.58□□□□□ -1.04
CASP4-212ENST00000533730 ANKRD33Q7Z3H0 272 aa8.58□□□□□ -1.04
CASP4-212ENST00000533730 KLHL23Q8NBE8 558 aa8.58□□□□□ -1.04
CASP4-212ENST00000533730 CYP2W1Q8TAV3 490 aa8.58□□□□□ -1.04
CASP4-212ENST00000533730 SLC7A3Q8WY07 619 aa8.58□□□□□ -1.04
CASP4-212ENST00000533730 SEPT1Q8WYJ6 367 aa8.58□□□□□ -1.04
CASP4-212ENST00000533730 MBOAT7Q96N66 472 aa8.58□□□□□ -1.04
CASP4-212ENST00000533730 RIT2Q99578 217 aa8.58□□□□□ -1.04
CASP4-212ENST00000533730 GPR20Q99678 358 aa8.58□□□□□ -1.04
CASP4-212ENST00000533730 ZNF577Q9BSK1 485 aa8.58□□□□□ -1.04
CASP4-212ENST00000533730 SOX17Q9H6I2 414 aaPredicted RBP8.58□□□□□ -1.04
CASP4-212ENST00000533730 FAM86C1Q9NVL1 165 aa8.58□□□□□ -1.04
CASP4-212ENST00000533730 KCNK4Q9NYG8 393 aa8.58□□□□□ -1.04
CASP4-212ENST00000533730 DDX25Q9UHL0 483 aaKnown RBP8.58□□□□□ -1.04
CASP4-212ENST00000533730 ZNF215Q9UL58 517 aaPredicted RBP8.58□□□□□ -1.04
CASP4-212ENST00000533730 ATP11BQ9Y2G3 1177 aa8.58□□□□□ -1.04
CASP4-212ENST00000533730 MYH7BA7E2Y1 1941 aa8.57□□□□□ -1.04
CASP4-212ENST00000533730 PRAMEF27A3QJZ7 478 aa8.57□□□□□ -1.04
CASP4-212ENST00000533730 C9orf172C9J069 976 aa8.57□□□□□ -1.04
CASP4-212ENST00000533730 AGRPO00253 132 aa8.57□□□□□ -1.04
CASP4-212ENST00000533730 TBX3O15119 743 aa8.57□□□□□ -1.04
CASP4-212ENST00000533730 TSPAN6O43657 245 aa8.57□□□□□ -1.04
CASP4-212ENST00000533730 ZNF862O60290 1169 aa8.57□□□□□ -1.04
CASP4-212ENST00000533730 GAS7O60861 476 aa8.57□□□□□ -1.04
CASP4-212ENST00000533730 DTNBO60941 627 aa8.57□□□□□ -1.04
CASP4-212ENST00000533730 ADAM11O75078 769 aa8.57□□□□□ -1.04
CASP4-212ENST00000533730 ATP9AO75110 1047 aa8.57□□□□□ -1.04
CASP4-212ENST00000533730 F2P00734 622 aa8.57□□□□□ -1.04
CASP4-212ENST00000533730 LGALS2P05162 132 aa8.57□□□□□ -1.04
CASP4-212ENST00000533730 HSP90AA1P07900 732 aaKnown RBP8.57□□□□□ -1.04
CASP4-212ENST00000533730 SUPT20HL2P0C7V6 817 aa8.57□□□□□ -1.04
CASP4-212ENST00000533730 PTGS1P23219 599 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms