RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 SP110Q9HB58 689 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 OLA1Q9NTK5 396 aaKnown RBP7.39□□□□□ -1.23
CTNND1-236ENST00000533667 MTMR4Q9NYA4 1195 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 HSPBP1Q9NZL4 362 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 FNDC3AQ9Y2H6 1198 aaKnown RBP7.39□□□□□ -1.23
CTNND1-236ENST00000533667 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.39□□□□□ -1.23
CTNND1-236ENST00000533667 KDM6AO15550 1401 aaPredicted RBP7.39□□□□□ -1.23
CTNND1-236ENST00000533667 CRB1P82279 1406 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 PTPRUQ92729 1446 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 E5RI56 91 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 STXBP3O00186 592 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 MYL3P08590 195 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 KRT4P19013 534 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 PGM1P36871 562 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 GALCP54803 685 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 KCNQ4P56696 695 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 AP1B1Q10567 949 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 NFX1Q12986 1120 aaKnown RBP7.39□□□□□ -1.23
CTNND1-236ENST00000533667 MXD4Q14582 209 aaPredicted RBP7.39□□□□□ -1.23
CTNND1-236ENST00000533667 INPP5AQ14642 412 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 MTF1Q14872 753 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 C16orf87Q6PH81 154 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 POTEAQ6S8J7 498 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 CEP70Q8NHQ1 597 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 TSPAN17Q96FV3 270 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 CCT8L2Q96SF2 557 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 KCNK16Q96T55 309 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 GPBP1L1Q9HC44 474 aaPredicted RBP7.39□□□□□ -1.23
CTNND1-236ENST00000533667 ZCCHC17Q9NP64 241 aaKnown RBP7.39□□□□□ -1.23
CTNND1-236ENST00000533667 FAM217BQ9NTX9 383 aaPredicted RBP7.39□□□□□ -1.23
CTNND1-236ENST00000533667 DKK3Q9UBP4 350 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 BCORL1Q5H9F3 1711 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 ZBBXA8MT70 800 aa7.38□□□□□ -1.23
CTNND1-236ENST00000533667 CYP26A1O43174 497 aa7.38□□□□□ -1.23
CTNND1-236ENST00000533667 KITP10721 976 aa7.38□□□□□ -1.23
CTNND1-236ENST00000533667 GPSM2P81274 684 aa7.38□□□□□ -1.23
CTNND1-236ENST00000533667 GUCY1A3Q02108 690 aa7.38□□□□□ -1.23
CTNND1-236ENST00000533667 FMR1Q06787 632 aaKnown RBP eCLIP7.38□□□□□ -1.231e-6■■■■□ 23.3
CTNND1-236ENST00000533667 NSUN2Q08J23 767 aaKnown RBP eCLIP7.38□□□□□ -1.23
CTNND1-236ENST00000533667 SF3B3Q15393 1217 aaKnown RBP7.38□□□□□ -1.23
CTNND1-236ENST00000533667 TTC23LQ6PF05 361 aa7.38□□□□□ -1.23
CTNND1-236ENST00000533667 CYFIP1Q7L576 1253 aa7.38□□□□□ -1.23
CTNND1-236ENST00000533667 LDHDQ86WU2 507 aa7.38□□□□□ -1.23
CTNND1-236ENST00000533667 TEX9Q8N6V9 391 aa7.38□□□□□ -1.23
CTNND1-236ENST00000533667 ARHGEF26Q96DR7 871 aa7.38□□□□□ -1.23
CTNND1-236ENST00000533667 XPO6Q96QU8 1125 aaKnown RBP7.38□□□□□ -1.23
CTNND1-236ENST00000533667 ERGIC2Q96RQ1 377 aa7.38□□□□□ -1.23
CTNND1-236ENST00000533667 WRNIP1Q96S55 665 aa7.38□□□□□ -1.23
CTNND1-236ENST00000533667 DDX50Q9BQ39 737 aaKnown RBP7.38□□□□□ -1.23
CTNND1-236ENST00000533667 ISCUQ9H1K1 167 aa7.38□□□□□ -1.23
CTNND1-236ENST00000533667 JPH1Q9HDC5 661 aaPredicted RBP7.38□□□□□ -1.23
CTNND1-236ENST00000533667 FAM47DPA6NHR8 397 aa7.38□□□□□ -1.23
CTNND1-236ENST00000533667 TCP11X1B4DZS4 312 aa7.38□□□□□ -1.23
CTNND1-236ENST00000533667 MAN1A2O60476 641 aa7.38□□□□□ -1.23
CTNND1-236ENST00000533667 KLHL2O95198 593 aa7.38□□□□□ -1.23
CTNND1-236ENST00000533667 PYGLP06737 847 aa7.38□□□□□ -1.23
CTNND1-236ENST00000533667 AKR1B1P15121 316 aa7.38□□□□□ -1.23
CTNND1-236ENST00000533667 FXR2P51116 673 aaKnown RBP eCLIP7.38□□□□□ -1.232e-8■■■□□ 16.9
CTNND1-236ENST00000533667 POU5F1BQ06416 359 aa7.38□□□□□ -1.23
CTNND1-236ENST00000533667 RAD51Q06609 339 aa7.38□□□□□ -1.23
CTNND1-236ENST00000533667 CAPRIN1Q14444 709 aaKnown RBP7.38□□□□□ -1.23
CTNND1-236ENST00000533667 XRRA1Q6P2D8 792 aa7.38□□□□□ -1.23
CTNND1-236ENST00000533667 PPHLN1Q8NEY8 458 aaKnown RBP7.38□□□□□ -1.23
CTNND1-236ENST00000533667 SCFD1Q8WVM8 642 aa7.38□□□□□ -1.23
CTNND1-236ENST00000533667 RAPGEF5Q92565 580 aa7.38□□□□□ -1.23
CTNND1-236ENST00000533667 GPR101Q96P66 508 aaPredicted RBP7.38□□□□□ -1.23
CTNND1-236ENST00000533667 RBM15Q96T37 977 aaKnown RBP eCLIP7.38□□□□□ -1.232e-7■■□□□ 13.5
CTNND1-236ENST00000533667 CHP1Q99653 195 aa7.38□□□□□ -1.23
CTNND1-236ENST00000533667 STX18Q9P2W9 335 aaKnown RBP7.38□□□□□ -1.23
CTNND1-236ENST00000533667 HNRNPCL2B2RXH8 293 aa7.38□□□□□ -1.23
CTNND1-236ENST00000533667 CSF1RP07333 972 aa7.38□□□□□ -1.23
CTNND1-236ENST00000533667 GUCY1A2P33402 732 aa7.38□□□□□ -1.23
CTNND1-236ENST00000533667 NNMTP40261 264 aa7.38□□□□□ -1.23
CTNND1-236ENST00000533667 GJA8P48165 433 aa7.38□□□□□ -1.23
CTNND1-236ENST00000533667 TMED10P49755 219 aaKnown RBP7.38□□□□□ -1.23
CTNND1-236ENST00000533667 KRT33BQ14525 404 aa7.38□□□□□ -1.23
CTNND1-236ENST00000533667 LRRC14Q15048 493 aa7.38□□□□□ -1.23
CTNND1-236ENST00000533667 SGSM1Q2NKQ1 1148 aa7.38□□□□□ -1.23
CTNND1-236ENST00000533667 ANGPTL8Q6UXH0 198 aa7.38□□□□□ -1.23
CTNND1-236ENST00000533667 SETD3Q86TU7 594 aaPredicted RBP7.38□□□□□ -1.23
CTNND1-236ENST00000533667 SEPT12Q8IYM1 358 aa7.38□□□□□ -1.23
CTNND1-236ENST00000533667 ELMOD1Q8N336 334 aa7.38□□□□□ -1.23
CTNND1-236ENST00000533667 SLC26A7Q8TE54 656 aa7.38□□□□□ -1.23
CTNND1-236ENST00000533667 NAF1Q96HR8 494 aaKnown RBP7.38□□□□□ -1.23
CTNND1-236ENST00000533667 PPP1R16BQ96T49 567 aa7.38□□□□□ -1.23
CTNND1-236ENST00000533667 OSBPL1AQ9BXW6 950 aa7.38□□□□□ -1.23
CTNND1-236ENST00000533667 PRKAG2Q9UGJ0 569 aa7.38□□□□□ -1.23
CTNND1-236ENST00000533667 MTO1Q9Y2Z2 717 aaKnown RBP7.38□□□□□ -1.23
CTNND1-236ENST00000533667 ADGRB3O60242 1522 aa7.38□□□□□ -1.23
CTNND1-236ENST00000533667 CCDC195A0A1B0GUA6 201 aa7.38□□□□□ -1.23
CTNND1-236ENST00000533667 KRT75O95678 551 aa7.38□□□□□ -1.23
CTNND1-236ENST00000533667 CHN1P15882 459 aa7.38□□□□□ -1.23
CTNND1-236ENST00000533667 FGFR4P22455 802 aa7.38□□□□□ -1.23
CTNND1-236ENST00000533667 RFC5P40937 340 aa7.38□□□□□ -1.23
CTNND1-236ENST00000533667 SERPINB10P48595 397 aa7.38□□□□□ -1.23
CTNND1-236ENST00000533667 CACNB3P54284 484 aa7.38□□□□□ -1.23
CTNND1-236ENST00000533667 RBP5P82980 135 aa7.38□□□□□ -1.23
CTNND1-236ENST00000533667 FASTKD1Q53R41 847 aaKnown RBP7.38□□□□□ -1.23
CTNND1-236ENST00000533667 PID1Q7Z2X4 250 aa7.38□□□□□ -1.23
CTNND1-236ENST00000533667 SEPT8Q92599 483 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms