RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 PLIN2Q99541 437 aa13.6□□□□□ -0.23
CAPRIN1-213ENST00000533562 CDT1Q9H211 546 aa13.6□□□□□ -0.23
CAPRIN1-213ENST00000533562 SMOC2Q9H3U7 446 aa13.6□□□□□ -0.23
CAPRIN1-213ENST00000533562 EPS15L1Q9UBC2 864 aa13.6□□□□□ -0.23
CAPRIN1-213ENST00000533562 N4BP1O75113 896 aaKnown RBP13.59□□□□□ -0.23
CAPRIN1-213ENST00000533562 TOM1L1O75674 476 aa13.59□□□□□ -0.23
CAPRIN1-213ENST00000533562 FGFR3P22607 806 aa13.59□□□□□ -0.23
CAPRIN1-213ENST00000533562 PROZP22891 400 aa13.59□□□□□ -0.23
CAPRIN1-213ENST00000533562 OR1D2P34982 312 aa13.59□□□□□ -0.23
CAPRIN1-213ENST00000533562 UBA7P41226 1012 aa13.59□□□□□ -0.23
CAPRIN1-213ENST00000533562 CLCN5P51795 746 aa13.59□□□□□ -0.23
CAPRIN1-213ENST00000533562 SLC12A3P55017 1021 aa13.59□□□□□ -0.23
CAPRIN1-213ENST00000533562 UVSSAQ2YD98 709 aa13.59□□□□□ -0.23
CAPRIN1-213ENST00000533562 PPM1LQ5SGD2 360 aa13.59□□□□□ -0.23
CAPRIN1-213ENST00000533562 ASTLQ6HA08 431 aaPredicted RBP13.59□□□□□ -0.23
CAPRIN1-213ENST00000533562 ANKS3Q6ZW76 656 aa13.59□□□□□ -0.23
CAPRIN1-213ENST00000533562 RTL10Q7L3V2 364 aa13.59□□□□□ -0.23
CAPRIN1-213ENST00000533562 TAS1R3Q7RTX0 852 aa13.59□□□□□ -0.23
CAPRIN1-213ENST00000533562 BRAPQ7Z569 592 aa13.59□□□□□ -0.23
CAPRIN1-213ENST00000533562 CEP120Q8N960 986 aa13.59□□□□□ -0.23
CAPRIN1-213ENST00000533562 TMEM161BQ8NDZ6 487 aa13.59□□□□□ -0.23
CAPRIN1-213ENST00000533562 CALML4Q96GE6 196 aa13.59□□□□□ -0.23
CAPRIN1-213ENST00000533562 LARSQ9P2J5 1176 aaKnown RBP13.59□□□□□ -0.23
CAPRIN1-213ENST00000533562 FBXW11Q9UKB1 542 aa13.59□□□□□ -0.23
CAPRIN1-213ENST00000533562 FBXL21Q9UKT6 434 aa13.59□□□□□ -0.23
CAPRIN1-213ENST00000533562 DUSP12Q9UNI6 340 aa13.59□□□□□ -0.23
CAPRIN1-213ENST00000533562 ZFP37Q9Y6Q3 630 aaPredicted RBP13.59□□□□□ -0.23
CAPRIN1-213ENST00000533562 C2orf16Q68DN1 1984 aa13.59□□□□□ -0.23
CAPRIN1-213ENST00000533562 WDR87Q6ZQQ6 2873 aa13.59□□□□□ -0.23
CAPRIN1-213ENST00000533562 PLXNA3P51805 1871 aa13.59□□□□□ -0.23
CAPRIN1-213ENST00000533562 USP34Q70CQ2 3546 aa13.58□□□□□ -0.24
CAPRIN1-213ENST00000533562 CLDN3O15551 220 aa13.58□□□□□ -0.24
CAPRIN1-213ENST00000533562 XYLBO75191 536 aa13.58□□□□□ -0.24
CAPRIN1-213ENST00000533562 C8AP07357 584 aa13.58□□□□□ -0.24
CAPRIN1-213ENST00000533562 MAPTP10636 758 aaKnown RBP13.58□□□□□ -0.24
CAPRIN1-213ENST00000533562 LAMP2P13473 410 aa13.58□□□□□ -0.24
CAPRIN1-213ENST00000533562 KCNE1P15382 129 aa13.58□□□□□ -0.24
CAPRIN1-213ENST00000533562 SCP2P22307 547 aa13.58□□□□□ -0.24
CAPRIN1-213ENST00000533562 HOXA9P31269 272 aa13.58□□□□□ -0.24
CAPRIN1-213ENST00000533562 RPL9P32969 192 aaKnown RBP13.58□□□□□ -0.24
CAPRIN1-213ENST00000533562 TCF15Q12870 199 aa13.58□□□□□ -0.24
CAPRIN1-213ENST00000533562 RAB33AQ14088 237 aa13.58□□□□□ -0.24
CAPRIN1-213ENST00000533562 AXDND1Q5T1B0 1012 aaPredicted RBP13.58□□□□□ -0.24
CAPRIN1-213ENST00000533562 ZPBP2Q6X784 338 aa13.58□□□□□ -0.24
CAPRIN1-213ENST00000533562 MYADMQ96S97 322 aa13.58□□□□□ -0.24
CAPRIN1-213ENST00000533562 GOLGA2P5Q9HBQ8 144 aa13.58□□□□□ -0.24
CAPRIN1-213ENST00000533562 MTRRQ9UBK8 725 aa13.58□□□□□ -0.24
CAPRIN1-213ENST00000533562 BACE2Q9Y5Z0 518 aa13.58□□□□□ -0.24
CAPRIN1-213ENST00000533562 TRIP11Q15643 1979 aa13.58□□□□□ -0.24
CAPRIN1-213ENST00000533562 DENND4AQ7Z401 1863 aa13.57□□□□□ -0.24
CAPRIN1-213ENST00000533562 PODXLO00592 558 aa13.57□□□□□ -0.24
CAPRIN1-213ENST00000533562 HARSP12081 509 aaKnown RBP13.57□□□□□ -0.24
CAPRIN1-213ENST00000533562 PDCP20941 246 aa13.57□□□□□ -0.24
CAPRIN1-213ENST00000533562 FSHRP23945 695 aa13.57□□□□□ -0.24
CAPRIN1-213ENST00000533562 LONP1P36776 959 aaKnown RBP13.57□□□□□ -0.24
CAPRIN1-213ENST00000533562 MATR3P43243 847 aaKnown RBP eCLIP13.57□□□□□ -0.24
CAPRIN1-213ENST00000533562 NOLC1Q14978 699 aaKnown RBP eCLIP13.57□□□□□ -0.24
CAPRIN1-213ENST00000533562 TMEM119Q4V9L6 283 aa13.57□□□□□ -0.24
CAPRIN1-213ENST00000533562 GET4Q7L5D6 327 aaPredicted RBP13.57□□□□□ -0.24
CAPRIN1-213ENST00000533562 GRASPQ7Z6J2 395 aaPredicted RBP13.57□□□□□ -0.24
CAPRIN1-213ENST00000533562 SLC44A3Q8N4M1 653 aa13.57□□□□□ -0.24
CAPRIN1-213ENST00000533562 ATOH1Q92858 354 aaPredicted RBP13.57□□□□□ -0.24
CAPRIN1-213ENST00000533562 ZBTB45Q96K62 511 aaPredicted RBP13.57□□□□□ -0.24
CAPRIN1-213ENST00000533562 SNX27Q96L92 541 aa13.57□□□□□ -0.24
CAPRIN1-213ENST00000533562 ZMAT2Q96NC0 199 aaKnown RBP13.57□□□□□ -0.24
CAPRIN1-213ENST00000533562 CNTN3Q9P232 1028 aa13.57□□□□□ -0.24
CAPRIN1-213ENST00000533562 ANKFY1Q9P2R3 1169 aa13.57□□□□□ -0.24
CAPRIN1-213ENST00000533562 WNT16Q9UBV4 365 aa13.57□□□□□ -0.24
CAPRIN1-213ENST00000533562 ODF2LQ9ULJ1 636 aa13.57□□□□□ -0.24
CAPRIN1-213ENST00000533562 POLIQ9UNA4 740 aa13.57□□□□□ -0.24
CAPRIN1-213ENST00000533562 NUB1Q9Y5A7 615 aa13.57□□□□□ -0.24
CAPRIN1-213ENST00000533562 CDY1Q9Y6F8 540 aa13.57□□□□□ -0.24
CAPRIN1-213ENST00000533562 PTPRZ1P23471 2315 aaPredicted RBP13.57□□□□□ -0.24
CAPRIN1-213ENST00000533562 ABLIM1O14639 778 aa13.56□□□□□ -0.24
CAPRIN1-213ENST00000533562 ADAM12O43184 909 aa13.56□□□□□ -0.24
CAPRIN1-213ENST00000533562 GALR2O43603 387 aaPredicted RBP13.56□□□□□ -0.24
CAPRIN1-213ENST00000533562 IGFBP6P24592 240 aaPredicted RBP13.56□□□□□ -0.24
CAPRIN1-213ENST00000533562 TKTP29401 623 aaKnown RBP13.56□□□□□ -0.24
CAPRIN1-213ENST00000533562 SOX4Q06945 474 aaPredicted RBP13.56□□□□□ -0.24
CAPRIN1-213ENST00000533562 MCL1Q07820 350 aa13.56□□□□□ -0.24
CAPRIN1-213ENST00000533562 KYAT1Q16773 422 aa13.56□□□□□ -0.24
CAPRIN1-213ENST00000533562 ARSHQ5FYA8 562 aa13.56□□□□□ -0.24
CAPRIN1-213ENST00000533562 CD300LGQ6UXG3 332 aa13.56□□□□□ -0.24
CAPRIN1-213ENST00000533562 SIX5Q8N196 739 aa13.56□□□□□ -0.24
CAPRIN1-213ENST00000533562 TMEM105Q8N8V8 129 aa13.56□□□□□ -0.24
CAPRIN1-213ENST00000533562 FLCNQ8NFG4 579 aa13.56□□□□□ -0.24
CAPRIN1-213ENST00000533562 RASSF8Q8NHQ8 419 aa13.56□□□□□ -0.24
CAPRIN1-213ENST00000533562 ZNF461Q8TAF7 563 aa13.56□□□□□ -0.24
CAPRIN1-213ENST00000533562 SLC7A14Q8TBB6 771 aa13.56□□□□□ -0.24
CAPRIN1-213ENST00000533562 RSAD2Q8WXG1 361 aa13.56□□□□□ -0.24
CAPRIN1-213ENST00000533562 BICD1Q96G01 975 aa13.56□□□□□ -0.24
CAPRIN1-213ENST00000533562 PLEKHA5Q9HAU0 1116 aa13.56□□□□□ -0.24
CAPRIN1-213ENST00000533562 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.56□□□□□ -0.24
CAPRIN1-213ENST00000533562 RIF1Q5UIP0 2472 aaKnown RBP13.56□□□□□ -0.24
CAPRIN1-213ENST00000533562 VPS13AQ96RL7 3174 aa13.55□□□□□ -0.24
CAPRIN1-213ENST00000533562 MYH11P35749 1972 aa13.55□□□□□ -0.24
CAPRIN1-213ENST00000533562 NPHP3-ACAD11A0A0J9YXS1 232 aa13.55□□□□□ -0.24
CAPRIN1-213ENST00000533562 ANHXE9PGG2 379 aa13.55□□□□□ -0.24
CAPRIN1-213ENST00000533562 H0Y858 1186 aa13.55□□□□□ -0.24
CAPRIN1-213ENST00000533562 H7C4K7 107 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms