RNA–Protein interactions for RNA: ENST00000532078.1

DEPDC7-204, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-204ENST00000532078 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.73■□□□□ 0.27
DEPDC7-204ENST00000532078 FBXW11Q9UKB1 542 aa16.73■□□□□ 0.27
DEPDC7-204ENST00000532078 EDN1P05305 212 aa16.72■□□□□ 0.27
DEPDC7-204ENST00000532078 AOC1P19801 751 aa16.72■□□□□ 0.27
DEPDC7-204ENST00000532078 U2AF2P26368 475 aaKnown RBP eCLIP16.72■□□□□ 0.277e-8■■■■■ 27.3
DEPDC7-204ENST00000532078 PDIA5Q14554 519 aa16.72■□□□□ 0.27
DEPDC7-204ENST00000532078 NAB2Q15742 525 aa16.72■□□□□ 0.27
DEPDC7-204ENST00000532078 ATF7IP2Q5U623 682 aa16.72■□□□□ 0.27
DEPDC7-204ENST00000532078 GET4Q7L5D6 327 aaPredicted RBP16.72■□□□□ 0.27
DEPDC7-204ENST00000532078 CEP57Q86XR8 500 aa16.72■□□□□ 0.27
DEPDC7-204ENST00000532078 SIX5Q8N196 739 aa16.72■□□□□ 0.27
DEPDC7-204ENST00000532078 C4orf32Q8N8J7 132 aa16.72■□□□□ 0.27
DEPDC7-204ENST00000532078 SNX29Q8TEQ0 813 aa16.72■□□□□ 0.27
DEPDC7-204ENST00000532078 DDX19AQ9NUU7 478 aaKnown RBP16.72■□□□□ 0.27
DEPDC7-204ENST00000532078 KIAA1024Q9UPX6 916 aa16.72■□□□□ 0.27
DEPDC7-204ENST00000532078 USP20Q9Y2K6 914 aa16.72■□□□□ 0.27
DEPDC7-204ENST00000532078 GDAQ9Y2T3 454 aa16.72■□□□□ 0.27
DEPDC7-204ENST00000532078 DOCK8Q8NF50 2099 aa16.72■□□□□ 0.27
DEPDC7-204ENST00000532078 PHLPP2Q6ZVD8 1323 aa16.71■□□□□ 0.27
DEPDC7-204ENST00000532078 LAD1O00515 517 aa16.71■□□□□ 0.27
DEPDC7-204ENST00000532078 NARSO43776 548 aaKnown RBP16.71■□□□□ 0.27
DEPDC7-204ENST00000532078 HNRNPA1P09651 372 aaKnown RBP eCLIP16.71■□□□□ 0.27
DEPDC7-204ENST00000532078 PTGDRQ13258 359 aa16.71■□□□□ 0.27
DEPDC7-204ENST00000532078 ECM1Q16610 540 aa16.71■□□□□ 0.27
DEPDC7-204ENST00000532078 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.71■□□□□ 0.27
DEPDC7-204ENST00000532078 IGSF22Q8N9C0 903 aa16.71■□□□□ 0.27
DEPDC7-204ENST00000532078 RSAD2Q8WXG1 361 aa16.71■□□□□ 0.27
DEPDC7-204ENST00000532078 RTP3Q9BQQ7 232 aa16.71■□□□□ 0.27
DEPDC7-204ENST00000532078 CLSTN3Q9BQT9 956 aa16.71■□□□□ 0.27
DEPDC7-204ENST00000532078 RABGEF1Q9UJ41 708 aa16.71■□□□□ 0.27
DEPDC7-204ENST00000532078 CFAP54Q96N23 3096 aa16.71■□□□□ 0.27
DEPDC7-204ENST00000532078 VPS13AQ96RL7 3174 aa16.71■□□□□ 0.26
DEPDC7-204ENST00000532078 PROB1E7EW31 1015 aa16.7■□□□□ 0.26
DEPDC7-204ENST00000532078 TMEM189-UBE2V1I3L0A0 370 aa16.7■□□□□ 0.26
DEPDC7-204ENST00000532078 K7ERI5 159 aa16.7■□□□□ 0.26
DEPDC7-204ENST00000532078 SRFP11831 508 aa16.7■□□□□ 0.26
DEPDC7-204ENST00000532078 NPR3P17342 541 aa16.7■□□□□ 0.26
DEPDC7-204ENST00000532078 RFX1P22670 979 aa16.7■□□□□ 0.26
DEPDC7-204ENST00000532078 HOXA9P31269 272 aa16.7■□□□□ 0.26
DEPDC7-204ENST00000532078 NT5DC1Q5TFE4 455 aa16.7■□□□□ 0.26
DEPDC7-204ENST00000532078 KRT79Q5XKE5 535 aa16.7■□□□□ 0.26
DEPDC7-204ENST00000532078 LNX1Q8TBB1 728 aaPredicted RBP16.7■□□□□ 0.26
DEPDC7-204ENST00000532078 UROC1Q96N76 676 aa16.7■□□□□ 0.26
DEPDC7-204ENST00000532078 CXCL16Q9H2A7 254 aa16.7■□□□□ 0.26
DEPDC7-204ENST00000532078 TOPORSQ9NS56 1045 aaPredicted RBP16.7■□□□□ 0.26
DEPDC7-204ENST00000532078 WNT16Q9UBV4 365 aa16.7■□□□□ 0.26
DEPDC7-204ENST00000532078 DNM3Q9UQ16 869 aa16.7■□□□□ 0.26
DEPDC7-204ENST00000532078 TNFSF13BQ9Y275 285 aa16.7■□□□□ 0.26
DEPDC7-204ENST00000532078 KIF3AQ9Y496 699 aa16.7■□□□□ 0.26
DEPDC7-204ENST00000532078 ZFP37Q9Y6Q3 630 aaPredicted RBP16.7■□□□□ 0.26
DEPDC7-204ENST00000532078 VWA8A3KMH1 1905 aa16.69■□□□□ 0.26
DEPDC7-204ENST00000532078 BHMG1C9JSJ3 638 aaPredicted RBP16.69■□□□□ 0.26
DEPDC7-204ENST00000532078 XYLBO75191 536 aa16.69■□□□□ 0.26
DEPDC7-204ENST00000532078 C8AP07357 584 aa16.69■□□□□ 0.26
DEPDC7-204ENST00000532078 CFHP08603 1231 aa16.69■□□□□ 0.26
DEPDC7-204ENST00000532078 LAMP2P13473 410 aa16.69■□□□□ 0.26
DEPDC7-204ENST00000532078 FSHRP23945 695 aa16.69■□□□□ 0.26
DEPDC7-204ENST00000532078 PRPHP41219 470 aa16.69■□□□□ 0.26
DEPDC7-204ENST00000532078 NBL1P41271 181 aa16.69■□□□□ 0.26
DEPDC7-204ENST00000532078 YARSP54577 528 aaKnown RBP16.69■□□□□ 0.26
DEPDC7-204ENST00000532078 DMP1Q13316 513 aaPredicted RBP16.69■□□□□ 0.26
DEPDC7-204ENST00000532078 GLRA4Q5JXX5 417 aa16.69■□□□□ 0.26
DEPDC7-204ENST00000532078 PPM1LQ5SGD2 360 aa16.69■□□□□ 0.26
DEPDC7-204ENST00000532078 CCDC105Q8IYK2 499 aa16.69■□□□□ 0.26
DEPDC7-204ENST00000532078 SLC44A3Q8N4M1 653 aa16.69■□□□□ 0.26
DEPDC7-204ENST00000532078 DRC1Q96MC2 740 aa16.69■□□□□ 0.26
DEPDC7-204ENST00000532078 PPP1R10Q96QC0 940 aaKnown RBP16.69■□□□□ 0.26
DEPDC7-204ENST00000532078 KIF2CQ99661 725 aa16.69■□□□□ 0.26
DEPDC7-204ENST00000532078 CCDC94Q9BW85 323 aaPredicted RBP16.69■□□□□ 0.26
DEPDC7-204ENST00000532078 POLD4Q9HCU8 107 aa16.69■□□□□ 0.26
DEPDC7-204ENST00000532078 PCDHB6Q9Y5E3 794 aa16.69■□□□□ 0.26
DEPDC7-204ENST00000532078 MYO15AQ9UKN7 3530 aa16.69■□□□□ 0.26
DEPDC7-204ENST00000532078 CCDC169A6NNP5 214 aa16.68■□□□□ 0.26
DEPDC7-204ENST00000532078 ANHXE9PGG2 379 aa16.68■□□□□ 0.26
DEPDC7-204ENST00000532078 TRAPPC3O43617 180 aa16.68■□□□□ 0.26
DEPDC7-204ENST00000532078 B3GAT3O94766 335 aa16.68■□□□□ 0.26
DEPDC7-204ENST00000532078 FGFR3P22607 806 aa16.68■□□□□ 0.26
DEPDC7-204ENST00000532078 GRM5P41594 1212 aa16.68■□□□□ 0.26
DEPDC7-204ENST00000532078 NPTX2P47972 431 aa16.68■□□□□ 0.26
DEPDC7-204ENST00000532078 TOB1P50616 345 aaPredicted RBP16.68■□□□□ 0.26
DEPDC7-204ENST00000532078 PEX3P56589 373 aa16.68■□□□□ 0.26
DEPDC7-204ENST00000532078 HTR4Q13639 388 aa16.68■□□□□ 0.26
DEPDC7-204ENST00000532078 ZNF568Q3ZCX4 644 aa16.68■□□□□ 0.26
DEPDC7-204ENST00000532078 DCLRE1AQ6PJP8 1040 aa16.68■□□□□ 0.26
DEPDC7-204ENST00000532078 MRPL4Q9BYD3 311 aaKnown RBP16.68■□□□□ 0.26
DEPDC7-204ENST00000532078 CDT1Q9H211 546 aa16.68■□□□□ 0.26
DEPDC7-204ENST00000532078 MTRRQ9UBK8 725 aa16.68■□□□□ 0.26
DEPDC7-204ENST00000532078 WDR87Q6ZQQ6 2873 aa16.67■□□□□ 0.26
DEPDC7-204ENST00000532078 E9PMD0 336 aa16.67■□□□□ 0.26
DEPDC7-204ENST00000532078 ADAM12O43184 909 aa16.67■□□□□ 0.26
DEPDC7-204ENST00000532078 HIP1RO75146 1068 aa16.67■□□□□ 0.26
DEPDC7-204ENST00000532078 POU2F2P09086 479 aa16.67■□□□□ 0.26
DEPDC7-204ENST00000532078 CLCNKBP51801 687 aa16.67■□□□□ 0.26
DEPDC7-204ENST00000532078 RAB33AQ14088 237 aa16.67■□□□□ 0.26
DEPDC7-204ENST00000532078 DTHD1Q6ZMT9 781 aa16.67■□□□□ 0.26
DEPDC7-204ENST00000532078 GRASPQ7Z6J2 395 aaPredicted RBP16.67■□□□□ 0.26
DEPDC7-204ENST00000532078 DAW1Q8N136 415 aa16.67■□□□□ 0.26
DEPDC7-204ENST00000532078 SLC7A14Q8TBB6 771 aa16.67■□□□□ 0.26
DEPDC7-204ENST00000532078 ACO2Q99798 780 aaKnown RBP16.67■□□□□ 0.26
DEPDC7-204ENST00000532078 TIPINQ9BVW5 301 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms