RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 FAM213AQ9BRX8 229 aa18.02■□□□□ 0.48
VPS26B-206ENST00000531741 LRRC4CQ9HCJ2 640 aa18.02■□□□□ 0.48
VPS26B-206ENST00000531741 WHRNQ9P202 907 aa18.02■□□□□ 0.48
VPS26B-206ENST00000531741 MYPNQ86TC9 1320 aa18.02■□□□□ 0.47
VPS26B-206ENST00000531741 SPATA31C2B4DYI2 1134 aa18.02■□□□□ 0.47
VPS26B-206ENST00000531741 AGTP01019 485 aa18.02■□□□□ 0.47
VPS26B-206ENST00000531741 KRT5P13647 590 aa18.02■□□□□ 0.47
VPS26B-206ENST00000531741 MAPK4P31152 587 aa18.02■□□□□ 0.47
VPS26B-206ENST00000531741 MMP13P45452 471 aa18.02■□□□□ 0.47
VPS26B-206ENST00000531741 LIG3P49916 1009 aa18.02■□□□□ 0.47
VPS26B-206ENST00000531741 ACTR2P61160 394 aa18.02■□□□□ 0.47
VPS26B-206ENST00000531741 PTP4A2Q12974 167 aa18.02■□□□□ 0.47
VPS26B-206ENST00000531741 SLC29A2Q14542 456 aa18.02■□□□□ 0.47
VPS26B-206ENST00000531741 ZNF568Q3ZCX4 644 aa18.02■□□□□ 0.47
VPS26B-206ENST00000531741 TNFAIP8L3Q5GJ75 292 aa18.02■□□□□ 0.47
VPS26B-206ENST00000531741 CPNE8Q86YQ8 564 aa18.02■□□□□ 0.47
VPS26B-206ENST00000531741 CCDC60Q8IWA6 550 aaPredicted RBP18.02■□□□□ 0.47
VPS26B-206ENST00000531741 ZNF516Q92618 1163 aa18.02■□□□□ 0.47
VPS26B-206ENST00000531741 BICD1Q96G01 975 aa18.02■□□□□ 0.47
VPS26B-206ENST00000531741 POLR3FQ9H1D9 316 aaPredicted RBP18.02■□□□□ 0.47
VPS26B-206ENST00000531741 PIM2Q9P1W9 311 aa18.02■□□□□ 0.47
VPS26B-206ENST00000531741 ANAPC7Q9UJX3 599 aa18.02■□□□□ 0.47
VPS26B-206ENST00000531741 SIP14410 1827 aa18.01■□□□□ 0.47
VPS26B-206ENST00000531741 PIGRP01833 764 aa18.01■□□□□ 0.47
VPS26B-206ENST00000531741 CYP1A1P04798 512 aaPredicted RBP18.01■□□□□ 0.47
VPS26B-206ENST00000531741 CENPCQ03188 943 aa18.01■□□□□ 0.47
VPS26B-206ENST00000531741 WDR44Q5JSH3 913 aa18.01■□□□□ 0.47
VPS26B-206ENST00000531741 ERMARDQ5T6L9 678 aa18.01■□□□□ 0.47
VPS26B-206ENST00000531741 MIS18BP1Q6P0N0 1132 aa18.01■□□□□ 0.47
VPS26B-206ENST00000531741 STMN4Q9H169 189 aaPredicted RBP18.01■□□□□ 0.47
VPS26B-206ENST00000531741 SEMA4AQ9H3S1 761 aa18.01■□□□□ 0.47
VPS26B-206ENST00000531741 SEPT9Q9UHD8 586 aaPredicted RBP18.01■□□□□ 0.47
VPS26B-206ENST00000531741 RIPK2O43353 540 aa18■□□□□ 0.47
VPS26B-206ENST00000531741 C4BPAP04003 597 aaKnown RBP18■□□□□ 0.47
VPS26B-206ENST00000531741 PTPRAP18433 802 aa18■□□□□ 0.47
VPS26B-206ENST00000531741 TGFB2P61812 414 aa18■□□□□ 0.47
VPS26B-206ENST00000531741 GNPTABQ3T906 1256 aa18■□□□□ 0.47
VPS26B-206ENST00000531741 TRIM72Q6ZMU5 477 aa18■□□□□ 0.47
VPS26B-206ENST00000531741 TRMT10CQ7L0Y3 403 aaKnown RBP18■□□□□ 0.47
VPS26B-206ENST00000531741 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18■□□□□ 0.47
VPS26B-206ENST00000531741 EFCC1Q9HA90 598 aa18■□□□□ 0.47
VPS26B-206ENST00000531741 CYP39A1Q9NYL5 469 aa18■□□□□ 0.47
VPS26B-206ENST00000531741 LOC285556D6RIA3 1793 aa18■□□□□ 0.47
VPS26B-206ENST00000531741 MROH7Q68CQ1 1323 aa18■□□□□ 0.47
VPS26B-206ENST00000531741 C19orf81C9J6K1 198 aa18■□□□□ 0.47
VPS26B-206ENST00000531741 SUPT20HL2P0C7V6 817 aa18■□□□□ 0.47
VPS26B-206ENST00000531741 LIG4P49917 911 aa18■□□□□ 0.47
VPS26B-206ENST00000531741 CALCOCO2Q13137 446 aa18■□□□□ 0.47
VPS26B-206ENST00000531741 SUPT20HL1Q3ZLR7 823 aa18■□□□□ 0.47
VPS26B-206ENST00000531741 NBPF12Q5TAG4 269 aaPredicted RBP18■□□□□ 0.47
VPS26B-206ENST00000531741 MFSD5Q6N075 450 aa18■□□□□ 0.47
VPS26B-206ENST00000531741 PPP1R2P3Q6NXS1 205 aa18■□□□□ 0.47
VPS26B-206ENST00000531741 XPO6Q96QU8 1125 aaKnown RBP18■□□□□ 0.47
VPS26B-206ENST00000531741 PI4K2AQ9BTU6 479 aa18■□□□□ 0.47
VPS26B-206ENST00000531741 ROPN1BQ9BZX4 212 aaPredicted RBP18■□□□□ 0.47
VPS26B-206ENST00000531741 ROPN1Q9HAT0 212 aaPredicted RBP18■□□□□ 0.47
VPS26B-206ENST00000531741 DDX20Q9UHI6 824 aaKnown RBP18■□□□□ 0.47
VPS26B-206ENST00000531741 HACL1Q9UJ83 578 aa18■□□□□ 0.47
VPS26B-206ENST00000531741 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18■□□□□ 0.47
VPS26B-206ENST00000531741 MYH9P35579 1960 aaKnown RBP17.99■□□□□ 0.47
VPS26B-206ENST00000531741 RGS16O15492 202 aaPredicted RBP17.99■□□□□ 0.47
VPS26B-206ENST00000531741 CLDN3O15551 220 aa17.99■□□□□ 0.47
VPS26B-206ENST00000531741 SGO2Q562F6 1265 aa17.99■□□□□ 0.47
VPS26B-206ENST00000531741 MON1BQ7L1V2 547 aa17.99■□□□□ 0.47
VPS26B-206ENST00000531741 VCPIP1Q96JH7 1222 aa17.99■□□□□ 0.47
VPS26B-206ENST00000531741 FNBP1Q96RU3 617 aa17.99■□□□□ 0.47
VPS26B-206ENST00000531741 TEX13BQ9BXU2 312 aa17.99■□□□□ 0.47
VPS26B-206ENST00000531741 ACAD9Q9H845 621 aa17.99■□□□□ 0.47
VPS26B-206ENST00000531741 PICK1Q9NRD5 415 aa17.99■□□□□ 0.47
VPS26B-206ENST00000531741 DOCK5Q9H7D0 1870 aa17.99■□□□□ 0.47
VPS26B-206ENST00000531741 ATG7O95352 703 aa17.99■□□□□ 0.47
VPS26B-206ENST00000531741 HLA-DRAP01903 254 aa17.99■□□□□ 0.47
VPS26B-206ENST00000531741 ITIH2P19823 946 aa17.99■□□□□ 0.47
VPS26B-206ENST00000531741 TMEM132BQ14DG7 1078 aa17.99■□□□□ 0.47
VPS26B-206ENST00000531741 EMC2Q15006 297 aa17.99■□□□□ 0.47
VPS26B-206ENST00000531741 PLCB4Q15147 1175 aa17.99■□□□□ 0.47
VPS26B-206ENST00000531741 PPP1R7Q15435 360 aa17.99■□□□□ 0.47
VPS26B-206ENST00000531741 SLFN12LQ6IEE8 588 aa17.99■□□□□ 0.47
VPS26B-206ENST00000531741 RHBDF2Q6PJF5 856 aa17.99■□□□□ 0.47
VPS26B-206ENST00000531741 GRK7Q8WTQ7 553 aa17.99■□□□□ 0.47
VPS26B-206ENST00000531741 CNTN6Q9UQ52 1028 aa17.99■□□□□ 0.47
VPS26B-206ENST00000531741 PTPN22Q9Y2R2 807 aa17.99■□□□□ 0.47
VPS26B-206ENST00000531741 TP73O15350 636 aa17.98■□□□□ 0.47
VPS26B-206ENST00000531741 ACO1P21399 889 aaKnown RBP17.98■□□□□ 0.47
VPS26B-206ENST00000531741 RRM1P23921 792 aa17.98■□□□□ 0.47
VPS26B-206ENST00000531741 ICAM3P32942 547 aa17.98■□□□□ 0.47
VPS26B-206ENST00000531741 NAMPTP43490 491 aa17.98■□□□□ 0.47
VPS26B-206ENST00000531741 NSFP46459 744 aaKnown RBP17.98■□□□□ 0.47
VPS26B-206ENST00000531741 KCNJ1P48048 391 aa17.98■□□□□ 0.47
VPS26B-206ENST00000531741 STRN3Q13033 797 aa17.98■□□□□ 0.47
VPS26B-206ENST00000531741 PTK6Q13882 451 aa17.98■□□□□ 0.47
VPS26B-206ENST00000531741 TDRD10Q5VZ19 366 aaKnown RBP17.98■□□□□ 0.47
VPS26B-206ENST00000531741 MICALL2Q8IY33 904 aa17.98■□□□□ 0.47
VPS26B-206ENST00000531741 DDX27Q96GQ7 796 aaKnown RBP17.98■□□□□ 0.47
VPS26B-206ENST00000531741 PORCNQ9H237 461 aa17.98■□□□□ 0.47
VPS26B-206ENST00000531741 ADAM7Q9H2U9 754 aa17.98■□□□□ 0.47
VPS26B-206ENST00000531741 CCDC134Q9H6E4 229 aa17.98■□□□□ 0.47
VPS26B-206ENST00000531741 DHX33Q9H6R0 707 aaKnown RBP17.98■□□□□ 0.47
VPS26B-206ENST00000531741 A1CFQ9NQ94 594 aaKnown RBP17.98■□□□□ 0.47
VPS26B-206ENST00000531741 HOMER3Q9NSC5 361 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms