RNA–Protein interactions for RNA: ENST00000531589.5

SF3B2-212, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-212ENST00000531589 CXCL16Q9H2A7 254 aa14.38□□□□□ -0.11
SF3B2-212ENST00000531589 EPS15L1Q9UBC2 864 aa14.38□□□□□ -0.11
SF3B2-212ENST00000531589 FBXW11Q9UKB1 542 aa14.38□□□□□ -0.11
SF3B2-212ENST00000531589 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.38□□□□□ -0.11
SF3B2-212ENST00000531589 ZFP37Q9Y6Q3 630 aaPredicted RBP14.38□□□□□ -0.11
SF3B2-212ENST00000531589 XYLBO75191 536 aa14.37□□□□□ -0.11
SF3B2-212ENST00000531589 C8AP07357 584 aa14.37□□□□□ -0.11
SF3B2-212ENST00000531589 MAPTP10636 758 aaKnown RBP14.37□□□□□ -0.11
SF3B2-212ENST00000531589 KCNE1P15382 129 aa14.37□□□□□ -0.11
SF3B2-212ENST00000531589 HOXA9P31269 272 aa14.37□□□□□ -0.11
SF3B2-212ENST00000531589 ABCD1P33897 745 aa14.37□□□□□ -0.11
SF3B2-212ENST00000531589 OR1D2P34982 312 aa14.37□□□□□ -0.11
SF3B2-212ENST00000531589 RAB33AQ14088 237 aa14.37□□□□□ -0.11
SF3B2-212ENST00000531589 IER5LQ5T953 404 aa14.37□□□□□ -0.11
SF3B2-212ENST00000531589 TMEM161BQ8NDZ6 487 aa14.37□□□□□ -0.11
SF3B2-212ENST00000531589 SNX27Q96L92 541 aa14.37□□□□□ -0.11
SF3B2-212ENST00000531589 ANKFY1Q9P2R3 1169 aa14.37□□□□□ -0.11
SF3B2-212ENST00000531589 MTRRQ9UBK8 725 aa14.37□□□□□ -0.11
SF3B2-212ENST00000531589 DUSP12Q9UNI6 340 aa14.37□□□□□ -0.11
SF3B2-212ENST00000531589 BACE2Q9Y5Z0 518 aa14.37□□□□□ -0.11
SF3B2-212ENST00000531589 VPS37CA5D8V6 355 aaPredicted RBP14.36□□□□□ -0.11
SF3B2-212ENST00000531589 KRT18P05783 430 aaKnown RBP14.36□□□□□ -0.11
SF3B2-212ENST00000531589 HARSP12081 509 aaKnown RBP14.36□□□□□ -0.11
SF3B2-212ENST00000531589 MATR3P43243 847 aaKnown RBP eCLIP14.36□□□□□ -0.11
SF3B2-212ENST00000531589 CLCN5P51795 746 aa14.36□□□□□ -0.11
SF3B2-212ENST00000531589 CUL4AQ13619 759 aa14.36□□□□□ -0.11
SF3B2-212ENST00000531589 NOLC1Q14978 699 aaKnown RBP eCLIP14.36□□□□□ -0.11
SF3B2-212ENST00000531589 KYAT1Q16773 422 aa14.36□□□□□ -0.11
SF3B2-212ENST00000531589 HAUS6Q7Z4H7 955 aa14.36□□□□□ -0.11
SF3B2-212ENST00000531589 ALYREFQ86V81 257 aaKnown RBP14.36□□□□□ -0.11
SF3B2-212ENST00000531589 PRSS33Q8NF86 280 aa14.36□□□□□ -0.11
SF3B2-212ENST00000531589 FEZF2Q8TBJ5 459 aa14.36□□□□□ -0.11
SF3B2-212ENST00000531589 KCNN1Q92952 543 aa14.36□□□□□ -0.11
SF3B2-212ENST00000531589 BICD1Q96G01 975 aa14.36□□□□□ -0.11
SF3B2-212ENST00000531589 GOLGA2P5Q9HBQ8 144 aa14.36□□□□□ -0.11
SF3B2-212ENST00000531589 CNTN3Q9P232 1028 aa14.36□□□□□ -0.11
SF3B2-212ENST00000531589 FBXL21Q9UKT6 434 aa14.36□□□□□ -0.11
SF3B2-212ENST00000531589 NUB1Q9Y5A7 615 aa14.36□□□□□ -0.11
SF3B2-212ENST00000531589 ZNF318Q5VUA4 2279 aa14.36□□□□□ -0.11
SF3B2-212ENST00000531589 TRIOO75962 3097 aa14.35□□□□□ -0.11
SF3B2-212ENST00000531589 H7C4K7 107 aa14.35□□□□□ -0.11
SF3B2-212ENST00000531589 PODXLO00592 558 aa14.35□□□□□ -0.11
SF3B2-212ENST00000531589 ABLIM1O14639 778 aa14.35□□□□□ -0.11
SF3B2-212ENST00000531589 SYN3O14994 580 aa14.35□□□□□ -0.11
SF3B2-212ENST00000531589 N4BP1O75113 896 aaKnown RBP14.35□□□□□ -0.11
SF3B2-212ENST00000531589 FAM13AO94988 1023 aa14.35□□□□□ -0.11
SF3B2-212ENST00000531589 PDGFBP01127 241 aaPredicted RBP14.35□□□□□ -0.11
SF3B2-212ENST00000531589 POU2F2P09086 479 aa14.35□□□□□ -0.11
SF3B2-212ENST00000531589 LAMP2P13473 410 aa14.35□□□□□ -0.11
SF3B2-212ENST00000531589 FSHRP23945 695 aa14.35□□□□□ -0.11
SF3B2-212ENST00000531589 MRE11P49959 708 aa14.35□□□□□ -0.11
SF3B2-212ENST00000531589 VCPP55072 806 aaKnown RBP14.35□□□□□ -0.11
SF3B2-212ENST00000531589 NCKAP1LP55160 1127 aa14.35□□□□□ -0.11
SF3B2-212ENST00000531589 MCL1Q07820 350 aa14.35□□□□□ -0.11
SF3B2-212ENST00000531589 SF3A1Q15459 793 aaKnown RBP14.35□□□□□ -0.11
SF3B2-212ENST00000531589 AXDND1Q5T1B0 1012 aaPredicted RBP14.35□□□□□ -0.11
SF3B2-212ENST00000531589 GET4Q7L5D6 327 aaPredicted RBP14.35□□□□□ -0.11
SF3B2-212ENST00000531589 GPBP1Q86WP2 473 aa14.35□□□□□ -0.11
SF3B2-212ENST00000531589 ZBTB45Q96K62 511 aaPredicted RBP14.35□□□□□ -0.11
SF3B2-212ENST00000531589 MYADMQ96S97 322 aa14.35□□□□□ -0.11
SF3B2-212ENST00000531589 SMOC2Q9H3U7 446 aa14.35□□□□□ -0.11
SF3B2-212ENST00000531589 PLEKHA5Q9HAU0 1116 aa14.35□□□□□ -0.11
SF3B2-212ENST00000531589 PARVGQ9HBI0 331 aa14.35□□□□□ -0.11
SF3B2-212ENST00000531589 POLIQ9UNA4 740 aa14.35□□□□□ -0.11
SF3B2-212ENST00000531589 CDY1Q9Y6F8 540 aa14.35□□□□□ -0.11
SF3B2-212ENST00000531589 DENND4AQ7Z401 1863 aa14.35□□□□□ -0.11
SF3B2-212ENST00000531589 PLXNA3P51805 1871 aa14.34□□□□□ -0.11
SF3B2-212ENST00000531589 CLTAP09496 248 aa14.34□□□□□ -0.11
SF3B2-212ENST00000531589 TKTP29401 623 aaKnown RBP14.34□□□□□ -0.11
SF3B2-212ENST00000531589 ELF1P32519 619 aa14.34□□□□□ -0.11
SF3B2-212ENST00000531589 BRCC3P46736 316 aa14.34□□□□□ -0.11
SF3B2-212ENST00000531589 LIG4P49917 911 aa14.34□□□□□ -0.11
SF3B2-212ENST00000531589 SOX4Q06945 474 aaPredicted RBP14.34□□□□□ -0.11
SF3B2-212ENST00000531589 DHX8Q14562 1220 aaKnown RBP14.34□□□□□ -0.11
SF3B2-212ENST00000531589 ARSHQ5FYA8 562 aa14.34□□□□□ -0.11
SF3B2-212ENST00000531589 ASTLQ6HA08 431 aaPredicted RBP14.34□□□□□ -0.11
SF3B2-212ENST00000531589 GRASPQ7Z6J2 395 aaPredicted RBP14.34□□□□□ -0.11
SF3B2-212ENST00000531589 MYCT1Q8N699 235 aa14.34□□□□□ -0.11
SF3B2-212ENST00000531589 C3orf58Q8NDZ4 430 aa14.34□□□□□ -0.11
SF3B2-212ENST00000531589 ZNF461Q8TAF7 563 aa14.34□□□□□ -0.11
SF3B2-212ENST00000531589 SLC7A14Q8TBB6 771 aa14.34□□□□□ -0.11
SF3B2-212ENST00000531589 ZMAT2Q96NC0 199 aaKnown RBP14.34□□□□□ -0.11
SF3B2-212ENST00000531589 TSPAN18Q96SJ8 248 aa14.34□□□□□ -0.11
SF3B2-212ENST00000531589 REEP2Q9BRK0 252 aa14.34□□□□□ -0.11
SF3B2-212ENST00000531589 CCSER1Q9C0I3 900 aa14.34□□□□□ -0.11
SF3B2-212ENST00000531589 WNT16Q9UBV4 365 aa14.34□□□□□ -0.11
SF3B2-212ENST00000531589 CCDC39Q9UFE4 941 aa14.34□□□□□ -0.11
SF3B2-212ENST00000531589 NPHP3-ACAD11A0A0J9YXS1 232 aa14.33□□□□□ -0.12
SF3B2-212ENST00000531589 HNRNPDLO14979 420 aaKnown RBP14.33□□□□□ -0.12
SF3B2-212ENST00000531589 ADAM12O43184 909 aa14.33□□□□□ -0.12
SF3B2-212ENST00000531589 XPOTO43592 962 aaKnown RBP14.33□□□□□ -0.12
SF3B2-212ENST00000531589 GALR2O43603 387 aaPredicted RBP14.33□□□□□ -0.12
SF3B2-212ENST00000531589 TRAK2O60296 914 aa14.33□□□□□ -0.12
SF3B2-212ENST00000531589 TBCAO75347 108 aaKnown RBP14.33□□□□□ -0.12
SF3B2-212ENST00000531589 ZNF131P52739 623 aa14.33□□□□□ -0.12
SF3B2-212ENST00000531589 CACNB1Q02641 598 aaPredicted RBP14.33□□□□□ -0.12
SF3B2-212ENST00000531589 TCF15Q12870 199 aa14.33□□□□□ -0.12
SF3B2-212ENST00000531589 SLC10A6Q3KNW5 377 aa14.33□□□□□ -0.12
SF3B2-212ENST00000531589 SLC8B1Q6J4K2 584 aa14.33□□□□□ -0.12
SF3B2-212ENST00000531589 CD300LGQ6UXG3 332 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms