RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 RPL9P32969 192 aaKnown RBP12□□□□□ -0.49
CAPN1-221ENST00000531068 OSTNP61366 133 aa12□□□□□ -0.49
CAPN1-221ENST00000531068 CACNB1Q02641 598 aaPredicted RBP12□□□□□ -0.49
CAPN1-221ENST00000531068 MCL1Q07820 350 aa12□□□□□ -0.49
CAPN1-221ENST00000531068 NOLC1Q14978 699 aaKnown RBP eCLIP12□□□□□ -0.49
CAPN1-221ENST00000531068 NAB2Q15742 525 aa12□□□□□ -0.49
CAPN1-221ENST00000531068 FAM171A1Q5VUB5 890 aa12□□□□□ -0.49
CAPN1-221ENST00000531068 C15orf39Q6ZRI6 1047 aa12□□□□□ -0.49
CAPN1-221ENST00000531068 CCDC73Q6ZRK6 1079 aa12□□□□□ -0.49
CAPN1-221ENST00000531068 SV2BQ7L1I2 683 aa12□□□□□ -0.49
CAPN1-221ENST00000531068 GPR149Q86SP6 731 aa12□□□□□ -0.49
CAPN1-221ENST00000531068 CEP57Q86XR8 500 aa12□□□□□ -0.49
CAPN1-221ENST00000531068 PLCD3Q8N3E9 789 aa12□□□□□ -0.49
CAPN1-221ENST00000531068 C12orf76Q8N812 135 aaPredicted RBP12□□□□□ -0.49
CAPN1-221ENST00000531068 RABGGTAQ92696 567 aa12□□□□□ -0.49
CAPN1-221ENST00000531068 PAAF1Q9BRP4 392 aa12□□□□□ -0.49
CAPN1-221ENST00000531068 LRFN3Q9BTN0 628 aa12□□□□□ -0.49
CAPN1-221ENST00000531068 GZF1Q9H116 711 aaPredicted RBP12□□□□□ -0.49
CAPN1-221ENST00000531068 GOLPH3LQ9H4A5 285 aa12□□□□□ -0.49
CAPN1-221ENST00000531068 PLEKHA5Q9HAU0 1116 aa12□□□□□ -0.49
CAPN1-221ENST00000531068 TBX20Q9UMR3 447 aa12□□□□□ -0.49
CAPN1-221ENST00000531068 HPSEQ9Y251 543 aa12□□□□□ -0.49
CAPN1-221ENST00000531068 MYO7AQ13402 2215 aa12□□□□□ -0.49
CAPN1-221ENST00000531068 PRR33A8MZF0 331 aa11.99□□□□□ -0.49
CAPN1-221ENST00000531068 F8W810 466 aa11.99□□□□□ -0.49
CAPN1-221ENST00000531068 K7ENM7 598 aa11.99□□□□□ -0.49
CAPN1-221ENST00000531068 ABLIM1O14639 778 aa11.99□□□□□ -0.49
CAPN1-221ENST00000531068 CUTAO60888 179 aa11.99□□□□□ -0.49
CAPN1-221ENST00000531068 KIF4AO95239 1232 aa11.99□□□□□ -0.49
CAPN1-221ENST00000531068 HARSP12081 509 aaKnown RBP11.99□□□□□ -0.49
CAPN1-221ENST00000531068 COL9A1P20849 921 aa11.99□□□□□ -0.49
CAPN1-221ENST00000531068 CMA1P23946 247 aa11.99□□□□□ -0.49
CAPN1-221ENST00000531068 LIG4P49917 911 aa11.99□□□□□ -0.49
CAPN1-221ENST00000531068 SNW1Q13573 536 aaKnown RBP11.99□□□□□ -0.49
CAPN1-221ENST00000531068 STK38Q15208 465 aa11.99□□□□□ -0.49
CAPN1-221ENST00000531068 UPP1Q16831 310 aa11.99□□□□□ -0.49
CAPN1-221ENST00000531068 GLRA4Q5JXX5 417 aa11.99□□□□□ -0.49
CAPN1-221ENST00000531068 SPECC1Q5M775 1068 aa11.99□□□□□ -0.49
CAPN1-221ENST00000531068 SHC4Q6S5L8 630 aa11.99□□□□□ -0.49
CAPN1-221ENST00000531068 TMC5Q6UXY8 1006 aa11.99□□□□□ -0.49
CAPN1-221ENST00000531068 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.99□□□□□ -0.49
CAPN1-221ENST00000531068 USP49Q70CQ1 688 aa11.99□□□□□ -0.49
CAPN1-221ENST00000531068 PALB2Q86YC2 1186 aa11.99□□□□□ -0.49
CAPN1-221ENST00000531068 CEP120Q8N960 986 aa11.99□□□□□ -0.49
CAPN1-221ENST00000531068 CMASQ8NFW8 434 aaPredicted RBP11.99□□□□□ -0.49
CAPN1-221ENST00000531068 HASPINQ8TF76 798 aa11.99□□□□□ -0.49
CAPN1-221ENST00000531068 PIK3R5Q8WYR1 880 aa11.99□□□□□ -0.49
CAPN1-221ENST00000531068 EDAQ92838 391 aa11.99□□□□□ -0.49
CAPN1-221ENST00000531068 ZBTB45Q96K62 511 aaPredicted RBP11.99□□□□□ -0.49
CAPN1-221ENST00000531068 SNX27Q96L92 541 aa11.99□□□□□ -0.49
CAPN1-221ENST00000531068 CLIC6Q96NY7 704 aa11.99□□□□□ -0.49
CAPN1-221ENST00000531068 TSPAN18Q96SJ8 248 aa11.99□□□□□ -0.49
CAPN1-221ENST00000531068 LRRC27Q9C0I9 530 aa11.99□□□□□ -0.49
CAPN1-221ENST00000531068 TMEM63CQ9P1W3 806 aa11.99□□□□□ -0.49
CAPN1-221ENST00000531068 CNTN3Q9P232 1028 aa11.99□□□□□ -0.49
CAPN1-221ENST00000531068 ANKFY1Q9P2R3 1169 aa11.99□□□□□ -0.49
CAPN1-221ENST00000531068 MUTYHQ9UIF7 546 aa11.99□□□□□ -0.49
CAPN1-221ENST00000531068 USTQ9Y2C2 406 aa11.99□□□□□ -0.49
CAPN1-221ENST00000531068 FNDC1Q4ZHG4 1894 aaPredicted RBP11.99□□□□□ -0.49
CAPN1-221ENST00000531068 CCDC195A0A1B0GUA6 201 aa11.98□□□□□ -0.49
CAPN1-221ENST00000531068 HNRNPDLO14979 420 aaKnown RBP11.98□□□□□ -0.49
CAPN1-221ENST00000531068 TGM5O43548 720 aa11.98□□□□□ -0.49
CAPN1-221ENST00000531068 PIGRP01833 764 aa11.98□□□□□ -0.49
CAPN1-221ENST00000531068 CLCNKBP51801 687 aa11.98□□□□□ -0.49
CAPN1-221ENST00000531068 GTF2BQ00403 316 aa11.98□□□□□ -0.49
CAPN1-221ENST00000531068 ZSCAN23Q3MJ62 389 aa11.98□□□□□ -0.49
CAPN1-221ENST00000531068 RESP18Q5W5W9 173 aa11.98□□□□□ -0.49
CAPN1-221ENST00000531068 SLFN12LQ6IEE8 588 aa11.98□□□□□ -0.49
CAPN1-221ENST00000531068 LILRA6Q6PI73 481 aa11.98□□□□□ -0.49
CAPN1-221ENST00000531068 FMR1NBQ8N0W7 255 aaPredicted RBP11.98□□□□□ -0.49
CAPN1-221ENST00000531068 LNX1Q8TBB1 728 aaPredicted RBP11.98□□□□□ -0.49
CAPN1-221ENST00000531068 LRRC15Q8TF66 581 aa11.98□□□□□ -0.49
CAPN1-221ENST00000531068 DDX12PQ92771 950 aa11.98□□□□□ -0.49
CAPN1-221ENST00000531068 ACSF2Q96CM8 615 aaPredicted RBP11.98□□□□□ -0.49
CAPN1-221ENST00000531068 B3GALT6Q96L58 329 aa11.98□□□□□ -0.49
CAPN1-221ENST00000531068 PPP1R9BQ96SB3 815 aa11.98□□□□□ -0.49
CAPN1-221ENST00000531068 RHOBTB2Q9BYZ6 727 aa11.98□□□□□ -0.49
CAPN1-221ENST00000531068 CXCL16Q9H2A7 254 aa11.98□□□□□ -0.49
CAPN1-221ENST00000531068 ST6GALNAC4Q9H4F1 302 aa11.98□□□□□ -0.49
CAPN1-221ENST00000531068 POMKQ9H5K3 350 aa11.98□□□□□ -0.49
CAPN1-221ENST00000531068 MAN1C1Q9NR34 630 aa11.98□□□□□ -0.49
CAPN1-221ENST00000531068 CACNG4Q9UBN1 327 aa11.98□□□□□ -0.49
CAPN1-221ENST00000531068 SEL1LQ9UBV2 794 aa11.98□□□□□ -0.49
CAPN1-221ENST00000531068 GAP43P17677 238 aa11.97□□□□□ -0.49
CAPN1-221ENST00000531068 FGFR3P22607 806 aa11.97□□□□□ -0.49
CAPN1-221ENST00000531068 STAT6P42226 847 aa11.97□□□□□ -0.49
CAPN1-221ENST00000531068 ME1P48163 572 aa11.97□□□□□ -0.49
CAPN1-221ENST00000531068 PSMD5Q16401 504 aa11.97□□□□□ -0.49
CAPN1-221ENST00000531068 SLC10A6Q3KNW5 377 aa11.97□□□□□ -0.49
CAPN1-221ENST00000531068 HS1BP3Q53T59 392 aa11.97□□□□□ -0.49
CAPN1-221ENST00000531068 RTP2Q5QGT7 225 aa11.97□□□□□ -0.49
CAPN1-221ENST00000531068 KANK3Q6NY19 840 aa11.97□□□□□ -0.49
CAPN1-221ENST00000531068 PRSS55Q6UWB4 352 aaPredicted RBP11.97□□□□□ -0.49
CAPN1-221ENST00000531068 LRSAM1Q6UWE0 723 aa11.97□□□□□ -0.49
CAPN1-221ENST00000531068 ANKS3Q6ZW76 656 aa11.97□□□□□ -0.49
CAPN1-221ENST00000531068 OTOP3Q7RTS5 596 aa11.97□□□□□ -0.49
CAPN1-221ENST00000531068 DYMQ7RTS9 669 aa11.97□□□□□ -0.49
CAPN1-221ENST00000531068 ZNF720Q7Z2F6 126 aa11.97□□□□□ -0.49
CAPN1-221ENST00000531068 GAS2L3Q86XJ1 694 aa11.97□□□□□ -0.49
CAPN1-221ENST00000531068 CD302Q8IX05 232 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms