RNA–Protein interactions for RNA: ENST00000530275.3

MACF1-230, Transcript of microtubule-actin crosslinking factor 1, humanhuman

Gene MACF1, Length 5,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-230ENST00000530275 SERPIND1P05546 499 aa13.64□□□□□ -0.23
MACF1-230ENST00000530275 ATP2C1P98194 919 aaPredicted RBP13.64□□□□□ -0.23
MACF1-230ENST00000530275 MDH1BQ5I0G3 518 aa13.64□□□□□ -0.23
MACF1-230ENST00000530275 PDXKO00764 312 aa13.63□□□□□ -0.23
MACF1-230ENST00000530275 SRP72O76094 671 aaKnown RBP13.63□□□□□ -0.23
MACF1-230ENST00000530275 ACTR2P61160 394 aa13.63□□□□□ -0.23
MACF1-230ENST00000530275 STILQ15468 1287 aa13.63□□□□□ -0.23
MACF1-230ENST00000530275 ALX1Q15699 326 aa13.63□□□□□ -0.23
MACF1-230ENST00000530275 P3H1Q32P28 736 aa13.63□□□□□ -0.23
MACF1-230ENST00000530275 YIPF2Q9BWQ6 316 aa13.63□□□□□ -0.23
MACF1-230ENST00000530275 ALG13Q9NP73 1137 aaKnown RBP13.63□□□□□ -0.23
MACF1-230ENST00000530275 ARHGEF38Q9NXL2 777 aa13.63□□□□□ -0.23
MACF1-230ENST00000530275 LSM7Q9UK45 103 aaKnown RBP13.63□□□□□ -0.23
MACF1-230ENST00000530275 TEX33O43247 280 aa13.63□□□□□ -0.23
MACF1-230ENST00000530275 ALDH1A1P00352 501 aa13.63□□□□□ -0.23
MACF1-230ENST00000530275 SCP2P22307 547 aa13.63□□□□□ -0.23
MACF1-230ENST00000530275 LAMB3Q13751 1172 aa13.63□□□□□ -0.23
MACF1-230ENST00000530275 SPDYAQ5MJ70 313 aa13.63□□□□□ -0.23
MACF1-230ENST00000530275 LMBRD2Q68DH5 695 aaPredicted RBP13.63□□□□□ -0.23
MACF1-230ENST00000530275 RNF149Q8NC42 400 aa13.63□□□□□ -0.23
MACF1-230ENST00000530275 SENP7Q9BQF6 1050 aa13.63□□□□□ -0.23
MACF1-230ENST00000530275 HSPBP1Q9NZL4 362 aa13.63□□□□□ -0.23
MACF1-230ENST00000530275 KRT16P08779 473 aa13.63□□□□□ -0.23
MACF1-230ENST00000530275 SMG5Q9UPR3 1016 aaKnown RBP13.63□□□□□ -0.23
MACF1-230ENST00000530275 KCNH4Q9UQ05 1017 aa13.63□□□□□ -0.23
MACF1-230ENST00000530275 ANKRD65E5RJM6 399 aa13.63□□□□□ -0.23
MACF1-230ENST00000530275 TRAPPC3O43617 180 aa13.63□□□□□ -0.23
MACF1-230ENST00000530275 SESN2P58004 480 aaPredicted RBP13.63□□□□□ -0.23
MACF1-230ENST00000530275 ST8SIA6P61647 398 aa13.63□□□□□ -0.23
MACF1-230ENST00000530275 KIZQ2M2Z5 673 aa13.63□□□□□ -0.23
MACF1-230ENST00000530275 C16orf89Q6UX73 402 aa13.63□□□□□ -0.23
MACF1-230ENST00000530275 ADCK1Q86TW2 530 aa13.63□□□□□ -0.23
MACF1-230ENST00000530275 STAG2Q8N3U4 1231 aa13.63□□□□□ -0.23
MACF1-230ENST00000530275 H0Y626 953 aa13.62□□□□□ -0.23
MACF1-230ENST00000530275 TRIM16O95361 564 aa13.62□□□□□ -0.23
MACF1-230ENST00000530275 AGTP01019 485 aa13.62□□□□□ -0.23
MACF1-230ENST00000530275 TJAP1Q5JTD0 557 aa13.62□□□□□ -0.23
MACF1-230ENST00000530275 EPHA10Q5JZY3 1008 aa13.62□□□□□ -0.23
MACF1-230ENST00000530275 LRRC8BQ6P9F7 803 aa13.62□□□□□ -0.23
MACF1-230ENST00000530275 COG1Q8WTW3 980 aa13.62□□□□□ -0.23
MACF1-230ENST00000530275 PITPNM2Q9BZ72 1349 aa13.62□□□□□ -0.23
MACF1-230ENST00000530275 XPO7Q9UIA9 1087 aaKnown RBP13.62□□□□□ -0.23
MACF1-230ENST00000530275 TBC1D4O60343 1298 aa13.62□□□□□ -0.23
MACF1-230ENST00000530275 CDC42EP1Q00587 391 aa13.62□□□□□ -0.23
MACF1-230ENST00000530275 KCNB1Q14721 858 aa13.62□□□□□ -0.23
MACF1-230ENST00000530275 PHF21AQ96BD5 680 aa13.62□□□□□ -0.23
MACF1-230ENST00000530275 ZNF229Q9UJW7 825 aa13.62□□□□□ -0.23
MACF1-230ENST00000530275 EEF2KO00418 725 aaKnown RBP13.62□□□□□ -0.23
MACF1-230ENST00000530275 ORC4O43929 436 aa13.62□□□□□ -0.23
MACF1-230ENST00000530275 CDH2P19022 906 aaPredicted RBP13.62□□□□□ -0.23
MACF1-230ENST00000530275 ACTN3Q08043 901 aaPredicted RBP13.62□□□□□ -0.23
MACF1-230ENST00000530275 TRIM60Q495X7 471 aa13.62□□□□□ -0.23
MACF1-230ENST00000530275 MEI1Q5TIA1 1274 aa13.62□□□□□ -0.23
MACF1-230ENST00000530275 SNX31Q8N9S9 440 aa13.62□□□□□ -0.23
MACF1-230ENST00000530275 MED15Q96RN5 788 aa13.62□□□□□ -0.23
MACF1-230ENST00000530275 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.62□□□□□ -0.23
MACF1-230ENST00000530275 KIF28PB7ZC32 967 aa13.62□□□□□ -0.23
MACF1-230ENST00000530275 PPP3CCP48454 512 aa13.62□□□□□ -0.23
MACF1-230ENST00000530275 LDHDQ86WU2 507 aa13.62□□□□□ -0.23
MACF1-230ENST00000530275 TMEM161AQ9NX61 479 aa13.62□□□□□ -0.23
MACF1-230ENST00000530275 TCP11X1B4DZS4 312 aa13.62□□□□□ -0.23
MACF1-230ENST00000530275 CNPY4Q8N129 248 aa13.62□□□□□ -0.23
MACF1-230ENST00000530275 NUP93Q8N1F7 819 aa13.62□□□□□ -0.23
MACF1-230ENST00000530275 EHD2Q9NZN4 543 aa13.62□□□□□ -0.23
MACF1-230ENST00000530275 NMT1P30419 496 aaKnown RBP13.61□□□□□ -0.23
MACF1-230ENST00000530275 AKT1P31749 480 aa13.61□□□□□ -0.23
MACF1-230ENST00000530275 SERPINB9P50453 376 aa13.61□□□□□ -0.23
MACF1-230ENST00000530275 STAT5BP51692 787 aa13.61□□□□□ -0.23
MACF1-230ENST00000530275 RBP5P82980 135 aa13.61□□□□□ -0.23
MACF1-230ENST00000530275 LRIG3Q6UXM1 1119 aa13.61□□□□□ -0.23
MACF1-230ENST00000530275 CELF1Q92879 486 aaKnown RBP13.61□□□□□ -0.23
MACF1-230ENST00000530275 C18orf8Q96DM3 657 aa13.61□□□□□ -0.23
MACF1-230ENST00000530275 ARHGEF26Q96DR7 871 aa13.61□□□□□ -0.23
MACF1-230ENST00000530275 PPP1R2P1Q96PQ5 205 aa13.61□□□□□ -0.23
MACF1-230ENST00000530275 FAM129AQ9BZQ8 928 aa13.61□□□□□ -0.23
MACF1-230ENST00000530275 ZNF556Q9HAH1 456 aa13.61□□□□□ -0.23
MACF1-230ENST00000530275 AMACRQ9UHK6 382 aa13.61□□□□□ -0.23
MACF1-230ENST00000530275 CDYLQ9Y232 598 aa13.61□□□□□ -0.23
MACF1-230ENST00000530275 USP27XA6NNY8 438 aa13.61□□□□□ -0.23
MACF1-230ENST00000530275 WDR47O94967 919 aa13.61□□□□□ -0.23
MACF1-230ENST00000530275 ARL4DP49703 201 aa13.61□□□□□ -0.23
MACF1-230ENST00000530275 KDSRQ06136 332 aa13.61□□□□□ -0.23
MACF1-230ENST00000530275 CYTH1Q15438 398 aa13.61□□□□□ -0.23
MACF1-230ENST00000530275 CCDC144BQ3MJ40 725 aa13.61□□□□□ -0.23
MACF1-230ENST00000530275 SYCP2LQ5T4T6 812 aa13.61□□□□□ -0.23
MACF1-230ENST00000530275 KIRREL3Q8IZU9 778 aa13.61□□□□□ -0.23
MACF1-230ENST00000530275 SLC35G2Q8TBE7 412 aa13.61□□□□□ -0.23
MACF1-230ENST00000530275 MRPL1Q9BYD6 325 aaKnown RBP13.61□□□□□ -0.23
MACF1-230ENST00000530275 NSMCE4AQ9NXX6 385 aa13.61□□□□□ -0.23
MACF1-230ENST00000530275 RNF181Q9P0P0 153 aa13.61□□□□□ -0.23
MACF1-230ENST00000530275 HERC5Q9UII4 1024 aaKnown RBP13.61□□□□□ -0.23
MACF1-230ENST00000530275 MYO1GB0I1T2 1018 aa13.61□□□□□ -0.23
MACF1-230ENST00000530275 KDM1AO60341 852 aa13.61□□□□□ -0.23
MACF1-230ENST00000530275 DAB1O75553 588 aa13.61□□□□□ -0.23
MACF1-230ENST00000530275 ADRA2BP18089 450 aa13.61□□□□□ -0.23
MACF1-230ENST00000530275 VCAM1P19320 739 aa13.61□□□□□ -0.23
MACF1-230ENST00000530275 TRPC1P48995 793 aa13.61□□□□□ -0.23
MACF1-230ENST00000530275 MAP3K7CLP57077 242 aa13.61□□□□□ -0.23
MACF1-230ENST00000530275 SKOR1P84550 965 aa13.61□□□□□ -0.23
MACF1-230ENST00000530275 USP33Q8TEY7 942 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms