RNA–Protein interactions for RNA: ENST00000528471.1

CHRDL2-205, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-205ENST00000528471 MCM6Q14566 821 aa15.2■□□□□ 0.02
CHRDL2-205ENST00000528471 ARSHQ5FYA8 562 aa15.2■□□□□ 0.02
CHRDL2-205ENST00000528471 LIN9Q5TKA1 542 aa15.2■□□□□ 0.02
CHRDL2-205ENST00000528471 DCLRE1AQ6PJP8 1040 aa15.2■□□□□ 0.02
CHRDL2-205ENST00000528471 BMP8AQ7Z5Y6 402 aa15.2■□□□□ 0.02
CHRDL2-205ENST00000528471 UBALD2Q8IYN6 164 aa15.2■□□□□ 0.02
CHRDL2-205ENST00000528471 MYCT1Q8N699 235 aa15.2■□□□□ 0.02
CHRDL2-205ENST00000528471 RAD54LQ92698 747 aa15.2■□□□□ 0.02
CHRDL2-205ENST00000528471 STAMQ92783 540 aa15.2■□□□□ 0.02
CHRDL2-205ENST00000528471 INTS4Q96HW7 963 aaKnown RBP15.2■□□□□ 0.02
CHRDL2-205ENST00000528471 ZBTB45Q96K62 511 aaPredicted RBP15.2■□□□□ 0.02
CHRDL2-205ENST00000528471 PARVGQ9HBI0 331 aa15.2■□□□□ 0.02
CHRDL2-205ENST00000528471 FOXD4L1Q9NU39 408 aa15.2■□□□□ 0.02
CHRDL2-205ENST00000528471 ZDHHC7Q9NXF8 308 aa15.2■□□□□ 0.02
CHRDL2-205ENST00000528471 LIMD1Q9UGP4 676 aa15.2■□□□□ 0.02
CHRDL2-205ENST00000528471 CLIC4Q9Y696 253 aa15.2■□□□□ 0.02
CHRDL2-205ENST00000528471 ANK1P16157 1881 aa15.2■□□□□ 0.02
CHRDL2-205ENST00000528471 CLUHO75153 1309 aa15.19■□□□□ 0.02
CHRDL2-205ENST00000528471 ABLIM1O14639 778 aa15.19■□□□□ 0.02
CHRDL2-205ENST00000528471 ASGR2P07307 311 aa15.19■□□□□ 0.02
CHRDL2-205ENST00000528471 SCP2P22307 547 aa15.19■□□□□ 0.02
CHRDL2-205ENST00000528471 TXLNAP40222 546 aa15.19■□□□□ 0.02
CHRDL2-205ENST00000528471 LIG4P49917 911 aa15.19■□□□□ 0.02
CHRDL2-205ENST00000528471 NCKAP1LP55160 1127 aa15.19■□□□□ 0.02
CHRDL2-205ENST00000528471 RESTQ13127 1097 aa15.19■□□□□ 0.02
CHRDL2-205ENST00000528471 UPP1Q16831 310 aa15.19■□□□□ 0.02
CHRDL2-205ENST00000528471 HAUS6Q7Z4H7 955 aa15.19■□□□□ 0.02
CHRDL2-205ENST00000528471 LNX1Q8TBB1 728 aaPredicted RBP15.19■□□□□ 0.02
CHRDL2-205ENST00000528471 LARP4BQ92615 738 aaKnown RBP15.19■□□□□ 0.02
CHRDL2-205ENST00000528471 DDX27Q96GQ7 796 aaKnown RBP15.19■□□□□ 0.02
CHRDL2-205ENST00000528471 RHOBTB2Q9BYZ6 727 aa15.19■□□□□ 0.02
CHRDL2-205ENST00000528471 BLOC1S4Q9NUP1 217 aa15.19■□□□□ 0.02
CHRDL2-205ENST00000528471 GTF3C3Q9Y5Q9 886 aa15.19■□□□□ 0.02
CHRDL2-205ENST00000528471 I3L4J1 428 aa15.18■□□□□ 0.02
CHRDL2-205ENST00000528471 PODXLO00592 558 aa15.18■□□□□ 0.02
CHRDL2-205ENST00000528471 HNRNPDLO14979 420 aaKnown RBP15.18■□□□□ 0.02
CHRDL2-205ENST00000528471 KCNE1P15382 129 aa15.18■□□□□ 0.02
CHRDL2-205ENST00000528471 FGFR3P22607 806 aa15.18■□□□□ 0.02
CHRDL2-205ENST00000528471 MARCKSP29966 332 aaPredicted RBP15.18■□□□□ 0.02
CHRDL2-205ENST00000528471 GBP2P32456 591 aaPredicted RBP15.18■□□□□ 0.02
CHRDL2-205ENST00000528471 CEBPZQ03701 1054 aaKnown RBP15.18■□□□□ 0.02
CHRDL2-205ENST00000528471 SOX4Q06945 474 aaPredicted RBP15.18■□□□□ 0.02
CHRDL2-205ENST00000528471 SEZ6Q53EL9 994 aa15.18■□□□□ 0.02
CHRDL2-205ENST00000528471 XKR4Q5GH76 650 aa15.18■□□□□ 0.02
CHRDL2-205ENST00000528471 FAM173BQ6P4H8 233 aa15.18■□□□□ 0.02
CHRDL2-205ENST00000528471 LILRA6Q6PI73 481 aa15.18■□□□□ 0.02
CHRDL2-205ENST00000528471 ALKAL1Q6UXT8 129 aa15.18■□□□□ 0.02
CHRDL2-205ENST00000528471 FBXL6Q8N531 539 aa15.18■□□□□ 0.02
CHRDL2-205ENST00000528471 CLSTN3Q9BQT9 956 aa15.18■□□□□ 0.02
CHRDL2-205ENST00000528471 CCSER1Q9C0I3 900 aa15.18■□□□□ 0.02
CHRDL2-205ENST00000528471 WDR6Q9NNW5 1121 aaKnown RBP15.18■□□□□ 0.02
CHRDL2-205ENST00000528471 CNTN3Q9P232 1028 aa15.18■□□□□ 0.02
CHRDL2-205ENST00000528471 CCDC39Q9UFE4 941 aa15.18■□□□□ 0.02
CHRDL2-205ENST00000528471 FBXW11Q9UKB1 542 aa15.18■□□□□ 0.02
CHRDL2-205ENST00000528471 NUB1Q9Y5A7 615 aa15.18■□□□□ 0.02
CHRDL2-205ENST00000528471 TCHHQ07283 1943 aa15.18■□□□□ 0.02
CHRDL2-205ENST00000528471 ZMYND10O75800 440 aa15.17■□□□□ 0.02
CHRDL2-205ENST00000528471 TKTP29401 623 aaKnown RBP15.17■□□□□ 0.02
CHRDL2-205ENST00000528471 ABCD1P33897 745 aa15.17■□□□□ 0.02
CHRDL2-205ENST00000528471 BRCC3P46736 316 aa15.17■□□□□ 0.02
CHRDL2-205ENST00000528471 MCL1Q07820 350 aa15.17■□□□□ 0.02
CHRDL2-205ENST00000528471 PTPAQ15257 358 aa15.17■□□□□ 0.02
CHRDL2-205ENST00000528471 SPECC1Q5M775 1068 aa15.17■□□□□ 0.02
CHRDL2-205ENST00000528471 PPM1LQ5SGD2 360 aa15.17■□□□□ 0.02
CHRDL2-205ENST00000528471 ANKS3Q6ZW76 656 aa15.17■□□□□ 0.02
CHRDL2-205ENST00000528471 KRI1Q8N9T8 703 aaKnown RBP15.17■□□□□ 0.02
CHRDL2-205ENST00000528471 C3orf58Q8NDZ4 430 aa15.17■□□□□ 0.02
CHRDL2-205ENST00000528471 LRRC15Q8TF66 581 aa15.17■□□□□ 0.02
CHRDL2-205ENST00000528471 ZNF707Q96C28 371 aaPredicted RBP15.17■□□□□ 0.02
CHRDL2-205ENST00000528471 ASIC4Q96FT7 647 aa15.17■□□□□ 0.02
CHRDL2-205ENST00000528471 EPSTI1Q96J88 318 aa15.17■□□□□ 0.02
CHRDL2-205ENST00000528471 ZMAT2Q96NC0 199 aaKnown RBP15.17■□□□□ 0.02
CHRDL2-205ENST00000528471 PRKD2Q9BZL6 878 aa15.17■□□□□ 0.02
CHRDL2-205ENST00000528471 KCNH6Q9H252 994 aa15.17■□□□□ 0.02
CHRDL2-205ENST00000528471 MTRRQ9UBK8 725 aa15.17■□□□□ 0.02
CHRDL2-205ENST00000528471 STK17AQ9UEE5 414 aa15.17■□□□□ 0.02
CHRDL2-205ENST00000528471 FBXO2Q9UK22 296 aaPredicted RBP15.17■□□□□ 0.02
CHRDL2-205ENST00000528471 STX6O43752 255 aa15.17■□□□□ 0.02
CHRDL2-205ENST00000528471 TRAK2O60296 914 aa15.17■□□□□ 0.02
CHRDL2-205ENST00000528471 C8AP07357 584 aa15.17■□□□□ 0.02
CHRDL2-205ENST00000528471 CLTAP09496 248 aa15.17■□□□□ 0.02
CHRDL2-205ENST00000528471 CXCL8P10145 99 aa15.17■□□□□ 0.02
CHRDL2-205ENST00000528471 RPL9P32969 192 aaKnown RBP15.17■□□□□ 0.02
CHRDL2-205ENST00000528471 OR1D2P34982 312 aa15.17■□□□□ 0.02
CHRDL2-205ENST00000528471 ZNF131P52739 623 aa15.17■□□□□ 0.02
CHRDL2-205ENST00000528471 GET4Q7L5D6 327 aaPredicted RBP15.17■□□□□ 0.02
CHRDL2-205ENST00000528471 C18orf25Q96B23 403 aaPredicted RBP15.17■□□□□ 0.02
CHRDL2-205ENST00000528471 SMOC2Q9H3U7 446 aa15.17■□□□□ 0.02
CHRDL2-205ENST00000528471 ZSCAN16Q9H4T2 348 aaPredicted RBP15.17■□□□□ 0.02
CHRDL2-205ENST00000528471 TBX20Q9UMR3 447 aa15.17■□□□□ 0.02
CHRDL2-205ENST00000528471 MTMR6Q9Y217 621 aa15.17■□□□□ 0.02
CHRDL2-205ENST00000528471 SRPRBQ9Y5M8 271 aaKnown RBP15.17■□□□□ 0.02
CHRDL2-205ENST00000528471 CDY1Q9Y6F8 540 aa15.17■□□□□ 0.02
CHRDL2-205ENST00000528471 ADAM12O43184 909 aa15.16■□□□□ 0.02
CHRDL2-205ENST00000528471 HNRNPA1P09651 372 aaKnown RBP eCLIP15.16■□□□□ 0.02
CHRDL2-205ENST00000528471 IGFBP6P24592 240 aaPredicted RBP15.16■□□□□ 0.02
CHRDL2-205ENST00000528471 MCM4P33991 863 aa15.16■□□□□ 0.02
CHRDL2-205ENST00000528471 DDIT3P35638 169 aa15.16■□□□□ 0.02
CHRDL2-205ENST00000528471 PPP2R3AQ06190 1150 aa15.16■□□□□ 0.02
CHRDL2-205ENST00000528471 RAB33AQ14088 237 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms