RNA–Protein interactions for RNA: ENST00000521835.1

DENND3-217, Transcript of DENN domain containing 3, humanhuman

TSL 1 (best)

Gene DENND3, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-217ENST00000521835 CHRNA3P32297 505 aa12.99□□□□□ -0.33
DENND3-217ENST00000521835 DYNLT1P63172 113 aa12.99□□□□□ -0.33
DENND3-217ENST00000521835 ORC1Q13415 861 aa12.99□□□□□ -0.33
DENND3-217ENST00000521835 PCNX4Q63HM2 1172 aa12.99□□□□□ -0.33
DENND3-217ENST00000521835 NAIF1Q69YI7 327 aaPredicted RBP12.99□□□□□ -0.33
DENND3-217ENST00000521835 CCDC13Q8IYE1 715 aa12.99□□□□□ -0.33
DENND3-217ENST00000521835 FAM71AQ8IYT1 594 aa12.99□□□□□ -0.33
DENND3-217ENST00000521835 KIFAP3Q92845 792 aa12.99□□□□□ -0.33
DENND3-217ENST00000521835 IFT74Q96LB3 600 aa12.99□□□□□ -0.33
DENND3-217ENST00000521835 TARS2Q9BW92 718 aaKnown RBP12.99□□□□□ -0.33
DENND3-217ENST00000521835 TAOK3Q9H2K8 898 aa12.99□□□□□ -0.33
DENND3-217ENST00000521835 TBC1D22BQ9NU19 505 aa12.99□□□□□ -0.33
DENND3-217ENST00000521835 ZDHHC18Q9NUE0 388 aa12.99□□□□□ -0.33
DENND3-217ENST00000521835 ZNRF3Q9ULT6 936 aa12.99□□□□□ -0.33
DENND3-217ENST00000521835 PCDHA10Q9Y5I2 948 aa12.99□□□□□ -0.33
DENND3-217ENST00000521835 UBIAD1Q9Y5Z9 338 aa12.99□□□□□ -0.33
DENND3-217ENST00000521835 UBE4BO95155 1302 aa12.98□□□□□ -0.33
DENND3-217ENST00000521835 MIF4GDA9UHW6 222 aaKnown RBP12.98□□□□□ -0.33
DENND3-217ENST00000521835 GOLGA8SH3BPF8 625 aa12.98□□□□□ -0.33
DENND3-217ENST00000521835 GOLGA8MH3BSY2 632 aa12.98□□□□□ -0.33
DENND3-217ENST00000521835 PLSCR1O15162 318 aa12.98□□□□□ -0.33
DENND3-217ENST00000521835 THAP12O43422 761 aa12.98□□□□□ -0.33
DENND3-217ENST00000521835 FSTL1Q12841 308 aa12.98□□□□□ -0.33
DENND3-217ENST00000521835 WDR44Q5JSH3 913 aa12.98□□□□□ -0.33
DENND3-217ENST00000521835 CIAPIN1Q6FI81 312 aa12.98□□□□□ -0.33
DENND3-217ENST00000521835 C10orf88Q9H8K7 445 aa12.98□□□□□ -0.33
DENND3-217ENST00000521835 SLC38A10Q9HBR0 1119 aa12.98□□□□□ -0.33
DENND3-217ENST00000521835 LRRC37AA6NMS7 1700 aa12.98□□□□□ -0.33
DENND3-217ENST00000521835 WDR46O15213 610 aaKnown RBP12.98□□□□□ -0.33
DENND3-217ENST00000521835 TRAPPC3O43617 180 aa12.98□□□□□ -0.33
DENND3-217ENST00000521835 RALAP11233 206 aa12.98□□□□□ -0.33
DENND3-217ENST00000521835 ANXA13P27216 316 aa12.98□□□□□ -0.33
DENND3-217ENST00000521835 FKBP1AP62942 108 aaKnown RBP12.98□□□□□ -0.33
DENND3-217ENST00000521835 GTF2BQ00403 316 aa12.98□□□□□ -0.33
DENND3-217ENST00000521835 CDR2Q01850 454 aa12.98□□□□□ -0.33
DENND3-217ENST00000521835 E2F5Q15329 346 aa12.98□□□□□ -0.33
DENND3-217ENST00000521835 LRRC34Q8IZ02 419 aa12.98□□□□□ -0.33
DENND3-217ENST00000521835 HELQQ8TDG4 1101 aa12.98□□□□□ -0.33
DENND3-217ENST00000521835 ZBTB10Q96DT7 871 aa12.98□□□□□ -0.33
DENND3-217ENST00000521835 XPO6Q96QU8 1125 aaKnown RBP12.98□□□□□ -0.33
DENND3-217ENST00000521835 PFASO15067 1338 aa12.98□□□□□ -0.33
DENND3-217ENST00000521835 NPM3O75607 178 aaKnown RBP12.97□□□□□ -0.33
DENND3-217ENST00000521835 NEBLO76041 1014 aa12.97□□□□□ -0.33
DENND3-217ENST00000521835 HLA-DRAP01903 254 aa12.97□□□□□ -0.33
DENND3-217ENST00000521835 CYP24A1Q07973 514 aa12.97□□□□□ -0.33
DENND3-217ENST00000521835 DHX34Q14147 1143 aaKnown RBP12.97□□□□□ -0.33
DENND3-217ENST00000521835 B3GNT9Q6UX72 402 aa12.97□□□□□ -0.33
DENND3-217ENST00000521835 SLC9A9Q8IVB4 645 aa12.97□□□□□ -0.33
DENND3-217ENST00000521835 SHC3Q92529 594 aa12.97□□□□□ -0.33
DENND3-217ENST00000521835 DEFB129Q9H1M3 183 aa12.97□□□□□ -0.33
DENND3-217ENST00000521835 CDC42EP4Q9H3Q1 356 aaKnown RBP12.97□□□□□ -0.33
DENND3-217ENST00000521835 SLC24A3Q9HC58 644 aa12.97□□□□□ -0.33
DENND3-217ENST00000521835 TMEM8AQ9HCN3 771 aa12.97□□□□□ -0.33
DENND3-217ENST00000521835 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.97□□□□□ -0.33
DENND3-217ENST00000521835 PPFIA2O75334 1257 aa12.97□□□□□ -0.33
DENND3-217ENST00000521835 PTGIRP43119 386 aa12.97□□□□□ -0.33
DENND3-217ENST00000521835 INHBEP58166 350 aa12.97□□□□□ -0.33
DENND3-217ENST00000521835 STRN3Q13033 797 aa12.97□□□□□ -0.33
DENND3-217ENST00000521835 KCNV1Q6PIU1 500 aa12.97□□□□□ -0.33
DENND3-217ENST00000521835 PNMA8AQ86V59 439 aaPredicted RBP12.97□□□□□ -0.33
DENND3-217ENST00000521835 MICALL2Q8IY33 904 aa12.97□□□□□ -0.33
DENND3-217ENST00000521835 JPH2Q9BR39 696 aaPredicted RBP12.97□□□□□ -0.33
DENND3-217ENST00000521835 MOV10L1Q9BXT6 1211 aaKnown RBP12.97□□□□□ -0.33
DENND3-217ENST00000521835 EPB41L4BQ9H329 900 aa12.97□□□□□ -0.33
DENND3-217ENST00000521835 GREB1LQ9C091 1923 aaPredicted RBP12.97□□□□□ -0.33
DENND3-217ENST00000521835 PTPRJQ12913 1337 aa12.97□□□□□ -0.33
DENND3-217ENST00000521835 TCF4P15884 667 aa12.97□□□□□ -0.33
DENND3-217ENST00000521835 PEX5P50542 639 aa12.97□□□□□ -0.33
DENND3-217ENST00000521835 ITGA8P53708 1063 aa12.97□□□□□ -0.33
DENND3-217ENST00000521835 BRDTQ58F21 947 aaPredicted RBP12.97□□□□□ -0.33
DENND3-217ENST00000521835 ZNF365Q70YC5 407 aa12.97□□□□□ -0.33
DENND3-217ENST00000521835 SRRM1Q8IYB3 904 aaKnown RBP12.97□□□□□ -0.33
DENND3-217ENST00000521835 RTKN2Q8IZC4 609 aa12.97□□□□□ -0.33
DENND3-217ENST00000521835 GPD1LQ8N335 351 aa12.97□□□□□ -0.33
DENND3-217ENST00000521835 DEPTORQ8TB45 409 aa12.97□□□□□ -0.33
DENND3-217ENST00000521835 GMLQ99445 158 aa12.97□□□□□ -0.33
DENND3-217ENST00000521835 JPH1Q9HDC5 661 aaPredicted RBP12.97□□□□□ -0.33
DENND3-217ENST00000521835 PICK1Q9NRD5 415 aa12.97□□□□□ -0.33
DENND3-217ENST00000521835 GTF3C4Q9UKN8 822 aa12.97□□□□□ -0.33
DENND3-217ENST00000521835 FAM187AA6NFU0 413 aa12.96□□□□□ -0.33
DENND3-217ENST00000521835 VWA5AO00534 786 aa12.96□□□□□ -0.33
DENND3-217ENST00000521835 CSDE1O75534 798 aaKnown RBP12.96□□□□□ -0.33
DENND3-217ENST00000521835 ZSCAN5DPP0CG00 497 aa12.96□□□□□ -0.33
DENND3-217ENST00000521835 SRGAP2CP0DJJ0 459 aa12.96□□□□□ -0.33
DENND3-217ENST00000521835 ATF2P15336 505 aa12.96□□□□□ -0.33
DENND3-217ENST00000521835 KRT76Q01546 638 aa12.96□□□□□ -0.33
DENND3-217ENST00000521835 CNTN2Q02246 1040 aa12.96□□□□□ -0.33
DENND3-217ENST00000521835 FAM47EQ6ZV65 393 aa12.96□□□□□ -0.33
DENND3-217ENST00000521835 TBC1D31Q96DN5 1066 aa12.96□□□□□ -0.33
DENND3-217ENST00000521835 CHMP6Q96FZ7 201 aa12.96□□□□□ -0.33
DENND3-217ENST00000521835 STRA6Q9BX79 667 aa12.96□□□□□ -0.33
DENND3-217ENST00000521835 OSBPL7Q9BZF2 842 aa12.96□□□□□ -0.33
DENND3-217ENST00000521835 WNT8AQ9H1J5 351 aa12.96□□□□□ -0.33
DENND3-217ENST00000521835 ADAM22Q9P0K1 906 aa12.96□□□□□ -0.33
DENND3-217ENST00000521835 HACL1Q9UJ83 578 aa12.96□□□□□ -0.33
DENND3-217ENST00000521835 PIK3R2O00459 728 aa12.96□□□□□ -0.33
DENND3-217ENST00000521835 RIPK2O43353 540 aa12.96□□□□□ -0.33
DENND3-217ENST00000521835 GH1P01241 217 aa12.96□□□□□ -0.33
DENND3-217ENST00000521835 CCND2P30279 289 aa12.96□□□□□ -0.33
DENND3-217ENST00000521835 ACTR2P61160 394 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms