RNA–Protein interactions for RNA: ENST00000521640.5

CTNNA1-228, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-228ENST00000521640 MAP2K3P46734 347 aa7.26□□□□□ -1.25
CTNNA1-228ENST00000521640 ALDH5A1P51649 535 aaPredicted RBP7.26□□□□□ -1.25
CTNNA1-228ENST00000521640 VAMP7P51809 220 aa7.26□□□□□ -1.25
CTNNA1-228ENST00000521640 CYP27A1Q02318 531 aa7.26□□□□□ -1.25
CTNNA1-228ENST00000521640 DGKZQ13574 1117 aa7.26□□□□□ -1.25
CTNNA1-228ENST00000521640 NEDD9Q14511 834 aa7.26□□□□□ -1.25
CTNNA1-228ENST00000521640 KIF22Q14807 665 aa7.26□□□□□ -1.25
CTNNA1-228ENST00000521640 EPC2Q52LR7 807 aa7.26□□□□□ -1.25
CTNNA1-228ENST00000521640 TEX35Q5T0J7 233 aa7.26□□□□□ -1.25
CTNNA1-228ENST00000521640 TCERG1LQ5VWI1 586 aa7.26□□□□□ -1.25
CTNNA1-228ENST00000521640 CCDC70Q6NSX1 233 aa7.26□□□□□ -1.25
CTNNA1-228ENST00000521640 ANO5Q75V66 913 aa7.26□□□□□ -1.25
CTNNA1-228ENST00000521640 FASTKD5Q7L8L6 764 aaKnown RBP7.26□□□□□ -1.25
CTNNA1-228ENST00000521640 FAM133AQ8N9E0 248 aa7.26□□□□□ -1.25
CTNNA1-228ENST00000521640 LRRN4CLQ8ND94 238 aa7.26□□□□□ -1.25
CTNNA1-228ENST00000521640 MORC4Q8TE76 937 aa7.26□□□□□ -1.25
CTNNA1-228ENST00000521640 CLP1Q92989 425 aaKnown RBP7.26□□□□□ -1.25
CTNNA1-228ENST00000521640 FAM167AQ96KS9 214 aa7.26□□□□□ -1.25
CTNNA1-228ENST00000521640 IFT74Q96LB3 600 aa7.26□□□□□ -1.25
CTNNA1-228ENST00000521640 CRACR2AQ9BSW2 395 aa7.26□□□□□ -1.25
CTNNA1-228ENST00000521640 SYT11Q9BT88 431 aa7.26□□□□□ -1.25
CTNNA1-228ENST00000521640 SPATC1LQ9H0A9 340 aa7.26□□□□□ -1.25
CTNNA1-228ENST00000521640 INTS2Q9H0H0 1204 aaKnown RBP7.26□□□□□ -1.25
CTNNA1-228ENST00000521640 ARFGAP3Q9NP61 516 aa7.26□□□□□ -1.25
CTNNA1-228ENST00000521640 CYP26B1Q9NR63 512 aa7.26□□□□□ -1.25
CTNNA1-228ENST00000521640 HSPBP1Q9NZL4 362 aa7.26□□□□□ -1.25
CTNNA1-228ENST00000521640 RNF181Q9P0P0 153 aa7.26□□□□□ -1.25
CTNNA1-228ENST00000521640 CXXC1Q9P0U4 656 aaPredicted RBP7.26□□□□□ -1.25
CTNNA1-228ENST00000521640 ARHGAP28Q9P2N2 729 aa7.26□□□□□ -1.25
CTNNA1-228ENST00000521640 GABBR1Q9UBS5 961 aa7.26□□□□□ -1.25
CTNNA1-228ENST00000521640 TRIM10Q9UDY6 481 aa7.26□□□□□ -1.25
CTNNA1-228ENST00000521640 LRFN2Q9ULH4 789 aa7.26□□□□□ -1.25
CTNNA1-228ENST00000521640 TBX20Q9UMR3 447 aa7.26□□□□□ -1.25
CTNNA1-228ENST00000521640 SCAF8Q9UPN6 1271 aaKnown RBP7.26□□□□□ -1.25
CTNNA1-228ENST00000521640 SLC45A1Q9Y2W3 748 aa7.26□□□□□ -1.25
CTNNA1-228ENST00000521640 FHOD1Q9Y613 1164 aa7.26□□□□□ -1.25
CTNNA1-228ENST00000521640 STYXL1Q9Y6J8 313 aa7.26□□□□□ -1.25
CTNNA1-228ENST00000521640 POLR2AP24928 1970 aaKnown RBP7.26□□□□□ -1.25
CTNNA1-228ENST00000521640 NCANO14594 1321 aa7.26□□□□□ -1.25
CTNNA1-228ENST00000521640 A0A087X0T9 212 aa7.25□□□□□ -1.25
CTNNA1-228ENST00000521640 IQCA1LA6NCM1 817 aa7.25□□□□□ -1.25
CTNNA1-228ENST00000521640 ZBTB39O15060 712 aa7.25□□□□□ -1.25
CTNNA1-228ENST00000521640 ZNF862O60290 1169 aa7.25□□□□□ -1.25
CTNNA1-228ENST00000521640 DDNO94850 711 aaPredicted RBP7.25□□□□□ -1.25
CTNNA1-228ENST00000521640 ATP1A1P05023 1023 aaKnown RBP7.25□□□□□ -1.25
CTNNA1-228ENST00000521640 FAM228BP0C875 321 aa7.25□□□□□ -1.25
CTNNA1-228ENST00000521640 NAMPTP43490 491 aa7.25□□□□□ -1.25
CTNNA1-228ENST00000521640 NPTX2P47972 431 aa7.25□□□□□ -1.25
CTNNA1-228ENST00000521640 SLC26A2P50443 739 aa7.25□□□□□ -1.25
CTNNA1-228ENST00000521640 CYP2J2P51589 502 aa7.25□□□□□ -1.25
CTNNA1-228ENST00000521640 HADHBP55084 474 aaKnown RBP7.25□□□□□ -1.25
CTNNA1-228ENST00000521640 PEX3P56589 373 aa7.25□□□□□ -1.25
CTNNA1-228ENST00000521640 IRX3P78415 501 aaPredicted RBP7.25□□□□□ -1.25
CTNNA1-228ENST00000521640 PRKCEQ02156 737 aa7.25□□□□□ -1.25
CTNNA1-228ENST00000521640 GFPT1Q06210 699 aaPredicted RBP7.25□□□□□ -1.25
CTNNA1-228ENST00000521640 NAA30Q147X3 362 aaPredicted RBP7.25□□□□□ -1.25
CTNNA1-228ENST00000521640 CLUL1Q15846 466 aa7.25□□□□□ -1.25
CTNNA1-228ENST00000521640 MAP9Q49MG5 647 aa7.25□□□□□ -1.25
CTNNA1-228ENST00000521640 GLE1Q53GS7 698 aaKnown RBP7.25□□□□□ -1.25
CTNNA1-228ENST00000521640 FAM160B1Q5W0V3 765 aa7.25□□□□□ -1.25
CTNNA1-228ENST00000521640 CC2D1AQ6P1N0 951 aaPredicted RBP7.25□□□□□ -1.25
CTNNA1-228ENST00000521640 METTL7BQ6UX53 244 aa7.25□□□□□ -1.25
CTNNA1-228ENST00000521640 ENOSF1Q7L5Y1 443 aa7.25□□□□□ -1.25
CTNNA1-228ENST00000521640 SYCE1Q8N0S2 351 aa7.25□□□□□ -1.25
CTNNA1-228ENST00000521640 KRT222Q8N1A0 295 aa7.25□□□□□ -1.25
CTNNA1-228ENST00000521640 ANKRD35Q8N283 1001 aa7.25□□□□□ -1.25
CTNNA1-228ENST00000521640 MMGT1Q8N4V1 131 aa7.25□□□□□ -1.25
CTNNA1-228ENST00000521640 SLC30A5Q8TAD4 765 aa7.25□□□□□ -1.25
CTNNA1-228ENST00000521640 LMO3Q8TAP4 145 aa7.25□□□□□ -1.25
CTNNA1-228ENST00000521640 LMBR1Q8WVP7 490 aa7.25□□□□□ -1.25
CTNNA1-228ENST00000521640 DHX38Q92620 1227 aaKnown RBP7.25□□□□□ -1.25
CTNNA1-228ENST00000521640 CEP170P1Q96L14 293 aa7.25□□□□□ -1.25
CTNNA1-228ENST00000521640 OXCT2Q9BYC2 517 aaPredicted RBP7.25□□□□□ -1.25
CTNNA1-228ENST00000521640 MROH8Q9H579 483 aa7.25□□□□□ -1.25
CTNNA1-228ENST00000521640 DHX33Q9H6R0 707 aaKnown RBP7.25□□□□□ -1.25
CTNNA1-228ENST00000521640 ANKZF1Q9H8Y5 726 aa7.25□□□□□ -1.25
CTNNA1-228ENST00000521640 KMT5AQ9NQR1 393 aa7.25□□□□□ -1.25
CTNNA1-228ENST00000521640 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.25□□□□□ -1.25
CTNNA1-228ENST00000521640 KLF15Q9UIH9 416 aa7.25□□□□□ -1.25
CTNNA1-228ENST00000521640 NAGPAQ9UK23 515 aa7.25□□□□□ -1.25
CTNNA1-228ENST00000521640 CAPN6Q9Y6Q1 641 aa7.25□□□□□ -1.25
CTNNA1-228ENST00000521640 V9GYY5 206 aaPredicted RBP7.25□□□□□ -1.25
CTNNA1-228ENST00000521640 MYH9P35579 1960 aaKnown RBP7.25□□□□□ -1.25
CTNNA1-228ENST00000521640 SYNGAP1Q96PV0 1343 aa7.25□□□□□ -1.25
CTNNA1-228ENST00000521640 DNAJC25-GNG10A0A024R161 153 aa7.24□□□□□ -1.25
CTNNA1-228ENST00000521640 MACROD2A1Z1Q3 448 aa7.24□□□□□ -1.25
CTNNA1-228ENST00000521640 DENND3A2RUS2 1198 aa7.24□□□□□ -1.25
CTNNA1-228ENST00000521640 SLC16A4O15374 487 aa7.24□□□□□ -1.25
CTNNA1-228ENST00000521640 FARP2O94887 1054 aaPredicted RBP7.24□□□□□ -1.25
CTNNA1-228ENST00000521640 LDHAP00338 332 aaKnown RBP7.24□□□□□ -1.25
CTNNA1-228ENST00000521640 H2AFZP0C0S5 128 aa7.24□□□□□ -1.25
CTNNA1-228ENST00000521640 TMEM253P0C7T8 217 aa7.24□□□□□ -1.25
CTNNA1-228ENST00000521640 ZSCAN20P17040 1043 aaPredicted RBP7.24□□□□□ -1.25
CTNNA1-228ENST00000521640 TNFRSF8P28908 595 aa7.24□□□□□ -1.25
CTNNA1-228ENST00000521640 CNGA1P29973 690 aa7.24□□□□□ -1.25
CTNNA1-228ENST00000521640 SCNN1AP37088 669 aa7.24□□□□□ -1.25
CTNNA1-228ENST00000521640 PAFAH1B1P43034 410 aa7.24□□□□□ -1.25
CTNNA1-228ENST00000521640 MXI1P50539 228 aa7.24□□□□□ -1.25
CTNNA1-228ENST00000521640 GPC3P51654 580 aa7.24□□□□□ -1.25
CTNNA1-228ENST00000521640 GRM1Q13255 1194 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms