RNA–Protein interactions for RNA: ENST00000520913.1

PVT1-209, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 584 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-209ENST00000520913 SPATA31D3P0C874 917 aa11.75□□□□□ -0.53
PVT1-209ENST00000520913 PLCG1P19174 1290 aa11.75□□□□□ -0.53
PVT1-209ENST00000520913 SCP2P22307 547 aa11.75□□□□□ -0.53
PVT1-209ENST00000520913 CACNB1Q02641 598 aaPredicted RBP11.75□□□□□ -0.53
PVT1-209ENST00000520913 UPP1Q16831 310 aa11.75□□□□□ -0.53
PVT1-209ENST00000520913 LILRA6Q6PI73 481 aa11.75□□□□□ -0.53
PVT1-209ENST00000520913 DCLRE1AQ6PJP8 1040 aa11.75□□□□□ -0.53
PVT1-209ENST00000520913 ALKAL1Q6UXT8 129 aa11.75□□□□□ -0.53
PVT1-209ENST00000520913 SPATA31D4Q6ZUB0 917 aa11.75□□□□□ -0.53
PVT1-209ENST00000520913 LNX1Q8TBB1 728 aaPredicted RBP11.75□□□□□ -0.53
PVT1-209ENST00000520913 ZNF707Q96C28 371 aaPredicted RBP11.75□□□□□ -0.53
PVT1-209ENST00000520913 BICD1Q96G01 975 aa11.75□□□□□ -0.53
PVT1-209ENST00000520913 ACAP3Q96P50 834 aa11.75□□□□□ -0.53
PVT1-209ENST00000520913 PRRX2Q99811 253 aa11.75□□□□□ -0.53
PVT1-209ENST00000520913 CLSTN3Q9BQT9 956 aa11.75□□□□□ -0.53
PVT1-209ENST00000520913 REEP2Q9BRK0 252 aa11.75□□□□□ -0.53
PVT1-209ENST00000520913 PRKD2Q9BZL6 878 aa11.75□□□□□ -0.53
PVT1-209ENST00000520913 PIDD1Q9HB75 910 aa11.75□□□□□ -0.53
PVT1-209ENST00000520913 MTRRQ9UBK8 725 aa11.75□□□□□ -0.53
PVT1-209ENST00000520913 USP34Q70CQ2 3546 aa11.74□□□□□ -0.53
PVT1-209ENST00000520913 NPHP3-ACAD11A0A0J9YXS1 232 aa11.74□□□□□ -0.53
PVT1-209ENST00000520913 K7ENM7 598 aa11.74□□□□□ -0.53
PVT1-209ENST00000520913 PODXLO00592 558 aa11.74□□□□□ -0.53
PVT1-209ENST00000520913 CLDN3O15551 220 aa11.74□□□□□ -0.53
PVT1-209ENST00000520913 TBCAO75347 108 aaKnown RBP11.74□□□□□ -0.53
PVT1-209ENST00000520913 ZMYND10O75800 440 aa11.74□□□□□ -0.53
PVT1-209ENST00000520913 FAM13AO94988 1023 aa11.74□□□□□ -0.53
PVT1-209ENST00000520913 KRT18P05783 430 aaKnown RBP11.74□□□□□ -0.53
PVT1-209ENST00000520913 MYBP10242 640 aa11.74□□□□□ -0.53
PVT1-209ENST00000520913 KCNE1P15382 129 aa11.74□□□□□ -0.53
PVT1-209ENST00000520913 FGFR3P22607 806 aa11.74□□□□□ -0.53
PVT1-209ENST00000520913 HOXA9P31269 272 aa11.74□□□□□ -0.53
PVT1-209ENST00000520913 GBP2P32456 591 aaPredicted RBP11.74□□□□□ -0.53
PVT1-209ENST00000520913 ABCD1P33897 745 aa11.74□□□□□ -0.53
PVT1-209ENST00000520913 MATR3P43243 847 aaKnown RBP eCLIP11.74□□□□□ -0.53
PVT1-209ENST00000520913 ZNF131P52739 623 aa11.74□□□□□ -0.53
PVT1-209ENST00000520913 GRIN1Q05586 938 aa11.74□□□□□ -0.53
PVT1-209ENST00000520913 SOX4Q06945 474 aaPredicted RBP11.74□□□□□ -0.53
PVT1-209ENST00000520913 MCL1Q07820 350 aa11.74□□□□□ -0.53
PVT1-209ENST00000520913 KARSQ15046 597 aaKnown RBP11.74□□□□□ -0.53
PVT1-209ENST00000520913 ARSHQ5FYA8 562 aa11.74□□□□□ -0.53
PVT1-209ENST00000520913 ANKS3Q6ZW76 656 aa11.74□□□□□ -0.53
PVT1-209ENST00000520913 C3orf58Q8NDZ4 430 aa11.74□□□□□ -0.53
PVT1-209ENST00000520913 LRRC15Q8TF66 581 aa11.74□□□□□ -0.53
PVT1-209ENST00000520913 LARP4BQ92615 738 aaKnown RBP11.74□□□□□ -0.53
PVT1-209ENST00000520913 RAD54LQ92698 747 aa11.74□□□□□ -0.53
PVT1-209ENST00000520913 KCNN1Q92952 543 aa11.74□□□□□ -0.53
PVT1-209ENST00000520913 DDX27Q96GQ7 796 aaKnown RBP11.74□□□□□ -0.53
PVT1-209ENST00000520913 INTS4Q96HW7 963 aaKnown RBP11.74□□□□□ -0.53
PVT1-209ENST00000520913 BACH2Q9BYV9 841 aa11.74□□□□□ -0.53
PVT1-209ENST00000520913 PARVGQ9HBI0 331 aa11.74□□□□□ -0.53
PVT1-209ENST00000520913 BLOC1S4Q9NUP1 217 aa11.74□□□□□ -0.53
PVT1-209ENST00000520913 LIMD1Q9UGP4 676 aa11.74□□□□□ -0.53
PVT1-209ENST00000520913 DUSP12Q9UNI6 340 aa11.74□□□□□ -0.53
PVT1-209ENST00000520913 K7ELQ4 463 aaPredicted RBP11.73□□□□□ -0.53
PVT1-209ENST00000520913 HNRNPDLO14979 420 aaKnown RBP11.73□□□□□ -0.53
PVT1-209ENST00000520913 N4BP1O75113 896 aaKnown RBP11.73□□□□□ -0.53
PVT1-209ENST00000520913 C8AP07357 584 aa11.73□□□□□ -0.53
PVT1-209ENST00000520913 HNRNPA1P09651 372 aaKnown RBP eCLIP11.73□□□□□ -0.53
PVT1-209ENST00000520913 TKTP29401 623 aaKnown RBP11.73□□□□□ -0.53
PVT1-209ENST00000520913 HOXD11P31277 338 aaPredicted RBP11.73□□□□□ -0.53
PVT1-209ENST00000520913 TXLNAP40222 546 aa11.73□□□□□ -0.53
PVT1-209ENST00000520913 LIG4P49917 911 aa11.73□□□□□ -0.53
PVT1-209ENST00000520913 NHLH1Q02575 133 aa11.73□□□□□ -0.53
PVT1-209ENST00000520913 RESTQ13127 1097 aa11.73□□□□□ -0.53
PVT1-209ENST00000520913 TDGQ13569 410 aa11.73□□□□□ -0.53
PVT1-209ENST00000520913 DHX8Q14562 1220 aaKnown RBP11.73□□□□□ -0.53
PVT1-209ENST00000520913 MCM6Q14566 821 aa11.73□□□□□ -0.53
PVT1-209ENST00000520913 KYAT1Q16773 422 aa11.73□□□□□ -0.53
PVT1-209ENST00000520913 PPM1LQ5SGD2 360 aa11.73□□□□□ -0.53
PVT1-209ENST00000520913 GET4Q7L5D6 327 aaPredicted RBP11.73□□□□□ -0.53
PVT1-209ENST00000520913 HAUS6Q7Z4H7 955 aa11.73□□□□□ -0.53
PVT1-209ENST00000520913 NUP210Q8TEM1 1887 aaPredicted RBP11.73□□□□□ -0.53
PVT1-209ENST00000520913 ZBTB45Q96K62 511 aaPredicted RBP11.73□□□□□ -0.53
PVT1-209ENST00000520913 ZMAT2Q96NC0 199 aaKnown RBP11.73□□□□□ -0.53
PVT1-209ENST00000520913 CCSER1Q9C0I3 900 aa11.73□□□□□ -0.53
PVT1-209ENST00000520913 SMOC2Q9H3U7 446 aa11.73□□□□□ -0.53
PVT1-209ENST00000520913 IGSF9Q9P2J2 1179 aa11.73□□□□□ -0.53
PVT1-209ENST00000520913 EPS15L1Q9UBC2 864 aa11.73□□□□□ -0.53
PVT1-209ENST00000520913 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.73□□□□□ -0.53
PVT1-209ENST00000520913 CDY1Q9Y6F8 540 aa11.73□□□□□ -0.53
PVT1-209ENST00000520913 MYO15AQ9UKN7 3530 aa11.73□□□□□ -0.53
PVT1-209ENST00000520913 SCN1AP35498 2009 aa11.72□□□□□ -0.53
PVT1-209ENST00000520913 PATJQ8NI35 1801 aa11.72□□□□□ -0.53
PVT1-209ENST00000520913 VPS13AQ96RL7 3174 aa11.72□□□□□ -0.53
PVT1-209ENST00000520913 SYN3O14994 580 aa11.72□□□□□ -0.53
PVT1-209ENST00000520913 XYLBO75191 536 aa11.72□□□□□ -0.53
PVT1-209ENST00000520913 PDGFBP01127 241 aaPredicted RBP11.72□□□□□ -0.53
PVT1-209ENST00000520913 PIGRP01833 764 aa11.72□□□□□ -0.53
PVT1-209ENST00000520913 POU2F2P09086 479 aa11.72□□□□□ -0.53
PVT1-209ENST00000520913 CXCL8P10145 99 aa11.72□□□□□ -0.53
PVT1-209ENST00000520913 SYT1P21579 422 aa11.72□□□□□ -0.53
PVT1-209ENST00000520913 RPL9P32969 192 aaKnown RBP11.72□□□□□ -0.53
PVT1-209ENST00000520913 OR1D2P34982 312 aa11.72□□□□□ -0.53
PVT1-209ENST00000520913 BRCC3P46736 316 aa11.72□□□□□ -0.53
PVT1-209ENST00000520913 PTPN5P54829 565 aa11.72□□□□□ -0.53
PVT1-209ENST00000520913 VCPP55072 806 aaKnown RBP11.72□□□□□ -0.53
PVT1-209ENST00000520913 PPP2R3AQ06190 1150 aa11.72□□□□□ -0.53
PVT1-209ENST00000520913 RAB33AQ14088 237 aa11.72□□□□□ -0.53
PVT1-209ENST00000520913 PTPAQ15257 358 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms