RNA–Protein interactions for RNA: ENST00000520348.5

SNHG6-201, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2 BASIC

Gene SNHG6, Length 648 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-201ENST00000520348 BMS1Q14692 1282 aaKnown RBP17.3■□□□□ 0.36
SNHG6-201ENST00000520348 SPA17Q15506 151 aa17.3■□□□□ 0.36
SNHG6-201ENST00000520348 DUOXA2Q1HG44 320 aa17.3■□□□□ 0.36
SNHG6-201ENST00000520348 C10orf76Q5T2E6 689 aa17.3■□□□□ 0.36
SNHG6-201ENST00000520348 NOTUMQ6P988 496 aa17.3■□□□□ 0.36
SNHG6-201ENST00000520348 SLC27A1Q6PCB7 646 aa17.3■□□□□ 0.36
SNHG6-201ENST00000520348 CATSPER4Q7RTX7 472 aa17.3■□□□□ 0.36
SNHG6-201ENST00000520348 TRAPPC11Q7Z392 1133 aa17.3■□□□□ 0.36
SNHG6-201ENST00000520348 CD302Q8IX05 232 aa17.3■□□□□ 0.36
SNHG6-201ENST00000520348 CXorf38Q8TB03 319 aa17.3■□□□□ 0.36
SNHG6-201ENST00000520348 FAXDC2Q96IV6 333 aa17.3■□□□□ 0.36
SNHG6-201ENST00000520348 FAM84AQ96KN4 292 aa17.3■□□□□ 0.36
SNHG6-201ENST00000520348 ADPGKQ9BRR6 497 aa17.3■□□□□ 0.36
SNHG6-201ENST00000520348 CELF4Q9BZC1 486 aaKnown RBP17.3■□□□□ 0.36
SNHG6-201ENST00000520348 DEF6Q9H4E7 631 aa17.3■□□□□ 0.36
SNHG6-201ENST00000520348 PCDHA13Q9Y5I0 950 aa17.3■□□□□ 0.36
SNHG6-201ENST00000520348 TRPV2Q9Y5S1 764 aa17.3■□□□□ 0.36
SNHG6-201ENST00000520348 A0A087X0T9 212 aa17.29■□□□□ 0.36
SNHG6-201ENST00000520348 RCCD1A6NED2 376 aa17.29■□□□□ 0.36
SNHG6-201ENST00000520348 FAM228BP0C875 321 aa17.29■□□□□ 0.36
SNHG6-201ENST00000520348 ACLYP53396 1101 aa17.29■□□□□ 0.36
SNHG6-201ENST00000520348 CHMP4BP1P59074 171 aa17.29■□□□□ 0.36
SNHG6-201ENST00000520348 CYP27A1Q02318 531 aa17.29■□□□□ 0.36
SNHG6-201ENST00000520348 GFPT1Q06210 699 aaPredicted RBP17.29■□□□□ 0.36
SNHG6-201ENST00000520348 NCOA4Q13772 614 aa17.29■□□□□ 0.36
SNHG6-201ENST00000520348 TMEM132AQ24JP5 1023 aa17.29■□□□□ 0.36
SNHG6-201ENST00000520348 SLC10A6Q3KNW5 377 aa17.29■□□□□ 0.36
SNHG6-201ENST00000520348 ARHGAP29Q52LW3 1261 aa17.29■□□□□ 0.36
SNHG6-201ENST00000520348 TXLNBQ8N3L3 684 aa17.29■□□□□ 0.36
SNHG6-201ENST00000520348 UBR7Q8N806 425 aa17.29■□□□□ 0.36
SNHG6-201ENST00000520348 SLC43A3Q8NBI5 491 aa17.29■□□□□ 0.36
SNHG6-201ENST00000520348 DHX38Q92620 1227 aaKnown RBP17.29■□□□□ 0.36
SNHG6-201ENST00000520348 WNT8BQ93098 351 aa17.29■□□□□ 0.36
SNHG6-201ENST00000520348 IFIH1Q9BYX4 1025 aaKnown RBP17.29■□□□□ 0.36
SNHG6-201ENST00000520348 TSGA10Q9BZW7 698 aa17.29■□□□□ 0.36
SNHG6-201ENST00000520348 MTMR12Q9C0I1 747 aa17.29■□□□□ 0.36
SNHG6-201ENST00000520348 SENP6Q9GZR1 1112 aaPredicted RBP17.29■□□□□ 0.36
SNHG6-201ENST00000520348 LACRTQ9GZZ8 138 aa17.29■□□□□ 0.36
SNHG6-201ENST00000520348 APOBEC3GQ9HC16 384 aaKnown RBP17.29■□□□□ 0.36
SNHG6-201ENST00000520348 HMX1Q9NP08 348 aaPredicted RBP17.29■□□□□ 0.36
SNHG6-201ENST00000520348 C1orf112Q9NSG2 853 aa17.29■□□□□ 0.36
SNHG6-201ENST00000520348 CNTN6Q9UQ52 1028 aa17.29■□□□□ 0.36
SNHG6-201ENST00000520348 C2CD2Q9Y426 696 aa17.29■□□□□ 0.36
SNHG6-201ENST00000520348 PAXBP1Q9Y5B6 917 aa17.29■□□□□ 0.36
SNHG6-201ENST00000520348 PTCH2Q9Y6C5 1203 aa17.29■□□□□ 0.36
SNHG6-201ENST00000520348 DDX3XO00571 662 aaKnown RBP eCLIP17.28■□□□□ 0.368e-9■■□□□ 14.5
SNHG6-201ENST00000520348 ACO1P21399 889 aaKnown RBP17.28■□□□□ 0.36
SNHG6-201ENST00000520348 FGFR4P22455 802 aa17.28■□□□□ 0.36
SNHG6-201ENST00000520348 NCBP1Q09161 790 aaKnown RBP17.28■□□□□ 0.36
SNHG6-201ENST00000520348 BIRC3Q13489 604 aa17.28■□□□□ 0.36
SNHG6-201ENST00000520348 ARHGAP44Q17R89 818 aa17.28■□□□□ 0.36
SNHG6-201ENST00000520348 TRIM71Q2Q1W2 868 aaKnown RBP17.28■□□□□ 0.36
SNHG6-201ENST00000520348 WDR44Q5JSH3 913 aa17.28■□□□□ 0.36
SNHG6-201ENST00000520348 DNTTIP2Q5QJE6 756 aaKnown RBP17.28■□□□□ 0.36
SNHG6-201ENST00000520348 UBXN11Q5T124 520 aa17.28■□□□□ 0.36
SNHG6-201ENST00000520348 RSPH3Q86UC2 560 aa17.28■□□□□ 0.36
SNHG6-201ENST00000520348 PPM1KQ8N3J5 372 aa17.28■□□□□ 0.36
SNHG6-201ENST00000520348 KIF18AQ8NI77 898 aa17.28■□□□□ 0.36
SNHG6-201ENST00000520348 LNX1Q8TBB1 728 aaPredicted RBP17.28■□□□□ 0.36
SNHG6-201ENST00000520348 TAF4BQ92750 862 aa17.28■□□□□ 0.36
SNHG6-201ENST00000520348 TATDN2Q93075 761 aa17.28■□□□□ 0.36
SNHG6-201ENST00000520348 XYLT2Q9H1B5 865 aa17.28■□□□□ 0.36
SNHG6-201ENST00000520348 VRTNQ9H8Y1 702 aa17.28■□□□□ 0.36
SNHG6-201ENST00000520348 PLEKHA5Q9HAU0 1116 aa17.28■□□□□ 0.36
SNHG6-201ENST00000520348 LZTFL1Q9NQ48 299 aa17.28■□□□□ 0.36
SNHG6-201ENST00000520348 DERAQ9Y315 318 aa17.28■□□□□ 0.36
SNHG6-201ENST00000520348 BTNL10A8MVZ5 291 aa17.27■□□□□ 0.36
SNHG6-201ENST00000520348 LACTBL1A8MY62 500 aa17.27■□□□□ 0.36
SNHG6-201ENST00000520348 KRT86O43790 486 aa17.27■□□□□ 0.36
SNHG6-201ENST00000520348 KIF5CO60282 957 aa17.27■□□□□ 0.36
SNHG6-201ENST00000520348 CAND2O75155 1236 aa17.27■□□□□ 0.36
SNHG6-201ENST00000520348 STAU1O95793 577 aaKnown RBP17.27■□□□□ 0.36
SNHG6-201ENST00000520348 ABL1P00519 1130 aa17.27■□□□□ 0.36
SNHG6-201ENST00000520348 TBXAS1P24557 533 aaPredicted RBP17.27■□□□□ 0.36
SNHG6-201ENST00000520348 MAGEA1P43355 309 aa17.27■□□□□ 0.36
SNHG6-201ENST00000520348 TERF1P54274 439 aa17.27■□□□□ 0.36
SNHG6-201ENST00000520348 NOP14P78316 857 aaKnown RBP17.27■□□□□ 0.36
SNHG6-201ENST00000520348 ARID5AQ03989 594 aa17.27■□□□□ 0.36
SNHG6-201ENST00000520348 CUL2Q13617 745 aa17.27■□□□□ 0.36
SNHG6-201ENST00000520348 NAB2Q15742 525 aa17.27■□□□□ 0.36
SNHG6-201ENST00000520348 FAM26DQ5JW98 314 aa17.27■□□□□ 0.36
SNHG6-201ENST00000520348 SYT10Q6XYQ8 523 aa17.27■□□□□ 0.36
SNHG6-201ENST00000520348 KIAA1328Q86T90 577 aa17.27■□□□□ 0.36
SNHG6-201ENST00000520348 VPS36Q86VN1 386 aa17.27■□□□□ 0.36
SNHG6-201ENST00000520348 FAM228AQ86W67 206 aa17.27■□□□□ 0.36
SNHG6-201ENST00000520348 GPIHBP1Q8IV16 184 aa17.27■□□□□ 0.36
SNHG6-201ENST00000520348 EPS8L1Q8TE68 723 aa17.27■□□□□ 0.36
SNHG6-201ENST00000520348 ANKRD36BP1Q96IX9 119 aa17.27■□□□□ 0.36
SNHG6-201ENST00000520348 SNX27Q96L92 541 aa17.27■□□□□ 0.36
SNHG6-201ENST00000520348 WDR24Q96S15 920 aa17.27■□□□□ 0.36
SNHG6-201ENST00000520348 TSPAN18Q96SJ8 248 aa17.27■□□□□ 0.36
SNHG6-201ENST00000520348 PI4K2AQ9BTU6 479 aa17.27■□□□□ 0.36
SNHG6-201ENST00000520348 LUC7LQ9NQ29 371 aaKnown RBP17.27■□□□□ 0.36
SNHG6-201ENST00000520348 ADAMTS1Q9UHI8 967 aa17.27■□□□□ 0.36
SNHG6-201ENST00000520348 NAGPAQ9UK23 515 aa17.27■□□□□ 0.36
SNHG6-201ENST00000520348 NOCTQ9UK39 431 aaKnown RBP17.27■□□□□ 0.36
SNHG6-201ENST00000520348 INTUQ9ULD6 942 aa17.27■□□□□ 0.36
SNHG6-201ENST00000520348 CDY2AQ9Y6F7 541 aa17.27■□□□□ 0.36
SNHG6-201ENST00000520348 NPTXRO95502 500 aa17.26■□□□□ 0.35
SNHG6-201ENST00000520348 TNNC2P02585 160 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms