RNA–Protein interactions for RNA: ENST00000520142.1

PABPC1-214, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 754 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-214ENST00000520142 OGTO15294 1046 aa12.13□□□□□ -0.47
PABPC1-214ENST00000520142 NR1I2O75469 434 aa12.13□□□□□ -0.47
PABPC1-214ENST00000520142 KIF4AO95239 1232 aa12.13□□□□□ -0.47
PABPC1-214ENST00000520142 SLFN14P0C7P3 912 aa12.13□□□□□ -0.47
PABPC1-214ENST00000520142 MYBP10242 640 aa12.13□□□□□ -0.47
PABPC1-214ENST00000520142 PFKFB1P16118 471 aa12.13□□□□□ -0.47
PABPC1-214ENST00000520142 COL9A1P20849 921 aa12.13□□□□□ -0.47
PABPC1-214ENST00000520142 HOXD13P35453 343 aa12.13□□□□□ -0.47
PABPC1-214ENST00000520142 TNFSF9P41273 254 aa12.13□□□□□ -0.47
PABPC1-214ENST00000520142 LIG4P49917 911 aa12.13□□□□□ -0.47
PABPC1-214ENST00000520142 YARSP54577 528 aaKnown RBP12.13□□□□□ -0.47
PABPC1-214ENST00000520142 UPP1Q16831 310 aa12.13□□□□□ -0.47
PABPC1-214ENST00000520142 PUS10Q3MIT2 529 aaKnown RBP12.13□□□□□ -0.47
PABPC1-214ENST00000520142 HERC4Q5GLZ8 1057 aaPredicted RBP12.13□□□□□ -0.47
PABPC1-214ENST00000520142 L1TD1Q5T7N2 865 aaKnown RBP12.13□□□□□ -0.47
PABPC1-214ENST00000520142 KANK3Q6NY19 840 aa12.13□□□□□ -0.47
PABPC1-214ENST00000520142 FUT10Q6P4F1 479 aa12.13□□□□□ -0.47
PABPC1-214ENST00000520142 SYCE2Q6PIF2 218 aa12.13□□□□□ -0.47
PABPC1-214ENST00000520142 CRELD2Q6UXH1 353 aaPredicted RBP12.13□□□□□ -0.47
PABPC1-214ENST00000520142 EPM2AIP1Q7L775 607 aaPredicted RBP12.13□□□□□ -0.47
PABPC1-214ENST00000520142 SMRP1Q8NCR6 262 aa12.13□□□□□ -0.47
PABPC1-214ENST00000520142 C3orf58Q8NDZ4 430 aa12.13□□□□□ -0.47
PABPC1-214ENST00000520142 GLIS3Q8NEA6 775 aa12.13□□□□□ -0.47
PABPC1-214ENST00000520142 ADAMTS19Q8TE59 1207 aa12.13□□□□□ -0.47
PABPC1-214ENST00000520142 KLHL5Q96PQ7 755 aa12.13□□□□□ -0.47
PABPC1-214ENST00000520142 S1PR5Q9H228 398 aa12.13□□□□□ -0.47
PABPC1-214ENST00000520142 MRPL44Q9H9J2 332 aaKnown RBP12.13□□□□□ -0.47
PABPC1-214ENST00000520142 GDPD2Q9HCC8 539 aa12.13□□□□□ -0.47
PABPC1-214ENST00000520142 USP25Q9UHP3 1055 aa12.13□□□□□ -0.47
PABPC1-214ENST00000520142 HOOK1Q9UJC3 728 aaKnown RBP12.13□□□□□ -0.47
PABPC1-214ENST00000520142 BARX2Q9UMQ3 279 aaPredicted RBP12.13□□□□□ -0.47
PABPC1-214ENST00000520142 HCFC2Q9Y5Z7 792 aa12.13□□□□□ -0.47
PABPC1-214ENST00000520142 PDCD11Q14690 1871 aaKnown RBP12.12□□□□□ -0.47
PABPC1-214ENST00000520142 BDP1A6H8Y1 2624 aa12.12□□□□□ -0.47
PABPC1-214ENST00000520142 A0A1B0GVL5 298 aa12.12□□□□□ -0.47
PABPC1-214ENST00000520142 MBTPS2O43462 519 aa12.12□□□□□ -0.47
PABPC1-214ENST00000520142 CNPP09543 421 aaKnown RBP12.12□□□□□ -0.47
PABPC1-214ENST00000520142 CXCL8P10145 99 aa12.12□□□□□ -0.47
PABPC1-214ENST00000520142 HARSP12081 509 aaKnown RBP12.12□□□□□ -0.47
PABPC1-214ENST00000520142 IDEP14735 1019 aa12.12□□□□□ -0.47
PABPC1-214ENST00000520142 IL9P15248 144 aa12.12□□□□□ -0.47
PABPC1-214ENST00000520142 CLCNKBP51801 687 aa12.12□□□□□ -0.47
PABPC1-214ENST00000520142 AMPD3Q01432 767 aa12.12□□□□□ -0.47
PABPC1-214ENST00000520142 POU5F1Q01860 360 aaKnown RBP12.12□□□□□ -0.47
PABPC1-214ENST00000520142 ALCAMQ13740 583 aa12.12□□□□□ -0.47
PABPC1-214ENST00000520142 ENOX2Q16206 610 aaKnown RBP12.12□□□□□ -0.47
PABPC1-214ENST00000520142 KYAT1Q16773 422 aa12.12□□□□□ -0.47
PABPC1-214ENST00000520142 PTCRAQ6ISU1 281 aaPredicted RBP12.12□□□□□ -0.47
PABPC1-214ENST00000520142 DCLRE1AQ6PJP8 1040 aa12.12□□□□□ -0.47
PABPC1-214ENST00000520142 CCDC65Q8IXS2 484 aa12.12□□□□□ -0.47
PABPC1-214ENST00000520142 ELOA2Q8IYF1 753 aaPredicted RBP12.12□□□□□ -0.47
PABPC1-214ENST00000520142 HPS3Q969F9 1004 aa12.12□□□□□ -0.47
PABPC1-214ENST00000520142 BICD1Q96G01 975 aa12.12□□□□□ -0.47
PABPC1-214ENST00000520142 UROC1Q96N76 676 aa12.12□□□□□ -0.47
PABPC1-214ENST00000520142 GOLGA2P5Q9HBQ8 144 aa12.12□□□□□ -0.47
PABPC1-214ENST00000520142 TBC1D7Q9P0N9 293 aa12.12□□□□□ -0.47
PABPC1-214ENST00000520142 SERTAD1Q9UHV2 236 aa12.12□□□□□ -0.47
PABPC1-214ENST00000520142 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.11□□□□□ -0.47
PABPC1-214ENST00000520142 PVALEFA0A1B0GWK0 134 aa12.11□□□□□ -0.47
PABPC1-214ENST00000520142 KLRC4O43908 158 aa12.11□□□□□ -0.47
PABPC1-214ENST00000520142 GCNT3O95395 438 aa12.11□□□□□ -0.47
PABPC1-214ENST00000520142 PAPLNO95428 1278 aa12.11□□□□□ -0.47
PABPC1-214ENST00000520142 C1RP00736 705 aa12.11□□□□□ -0.47
PABPC1-214ENST00000520142 FGFR3P22607 806 aa12.11□□□□□ -0.47
PABPC1-214ENST00000520142 CASP1P29466 404 aa12.11□□□□□ -0.47
PABPC1-214ENST00000520142 GLUD2P49448 558 aa12.11□□□□□ -0.47
PABPC1-214ENST00000520142 NDUFV1P49821 464 aa12.11□□□□□ -0.47
PABPC1-214ENST00000520142 CLCN4P51793 760 aa12.11□□□□□ -0.47
PABPC1-214ENST00000520142 NDUFA8P51970 172 aa12.11□□□□□ -0.47
PABPC1-214ENST00000520142 SMAD4Q13485 552 aaKnown RBP12.11□□□□□ -0.47
PABPC1-214ENST00000520142 CUL4BQ13620 913 aa12.11□□□□□ -0.47
PABPC1-214ENST00000520142 BMS1Q14692 1282 aaKnown RBP12.11□□□□□ -0.47
PABPC1-214ENST00000520142 SMAD2Q15796 467 aaKnown RBP12.11□□□□□ -0.47
PABPC1-214ENST00000520142 KLHL40Q2TBA0 621 aa12.11□□□□□ -0.47
PABPC1-214ENST00000520142 USP41Q3LFD5 358 aa12.11□□□□□ -0.47
PABPC1-214ENST00000520142 RTP2Q5QGT7 225 aa12.11□□□□□ -0.47
PABPC1-214ENST00000520142 SLFN12LQ6IEE8 588 aa12.11□□□□□ -0.47
PABPC1-214ENST00000520142 ANKRD54Q6NXT1 300 aa12.11□□□□□ -0.47
PABPC1-214ENST00000520142 UNC13DQ70J99 1090 aa12.11□□□□□ -0.47
PABPC1-214ENST00000520142 ZNF507Q8TCN5 953 aa12.11□□□□□ -0.47
PABPC1-214ENST00000520142 SUSD6Q92537 303 aa12.11□□□□□ -0.47
PABPC1-214ENST00000520142 C18orf25Q96B23 403 aaPredicted RBP12.11□□□□□ -0.47
PABPC1-214ENST00000520142 DDX27Q96GQ7 796 aaKnown RBP12.11□□□□□ -0.47
PABPC1-214ENST00000520142 PAGE5Q96GU1 130 aa12.11□□□□□ -0.47
PABPC1-214ENST00000520142 B3GALT6Q96L58 329 aa12.11□□□□□ -0.47
PABPC1-214ENST00000520142 ACCSQ96QU6 501 aa12.11□□□□□ -0.47
PABPC1-214ENST00000520142 TSPAN18Q96SJ8 248 aa12.11□□□□□ -0.47
PABPC1-214ENST00000520142 MSTO1Q9BUK6 570 aa12.11□□□□□ -0.47
PABPC1-214ENST00000520142 BLZF1Q9H2G9 400 aa12.11□□□□□ -0.47
PABPC1-214ENST00000520142 GOLPH3LQ9H4A5 285 aa12.11□□□□□ -0.47
PABPC1-214ENST00000520142 MRPL17Q9NRX2 175 aaKnown RBP12.11□□□□□ -0.47
PABPC1-214ENST00000520142 SLC38A7Q9NVC3 462 aa12.11□□□□□ -0.47
PABPC1-214ENST00000520142 FNIP2Q9P278 1114 aa12.11□□□□□ -0.47
PABPC1-214ENST00000520142 CD207Q9UJ71 328 aa12.11□□□□□ -0.47
PABPC1-214ENST00000520142 PCDHB13Q9Y5F0 798 aa12.11□□□□□ -0.47
PABPC1-214ENST00000520142 CITO14578 2027 aa12.11□□□□□ -0.47
PABPC1-214ENST00000520142 SF3B1O75533 1304 aaKnown RBP eCLIP12.11□□□□□ -0.476e-6■■■■■ 43.4
PABPC1-214ENST00000520142 LACTBL1A8MY62 500 aa12.1□□□□□ -0.47
PABPC1-214ENST00000520142 EIF3DO15371 548 aaKnown RBP eCLIP12.1□□□□□ -0.47
PABPC1-214ENST00000520142 TEX28O15482 410 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms