RNA–Protein interactions for RNA: ENST00000517671.5

NPM1-204, Transcript of nucleophosmin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPM1, Length 1,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-204ENST00000517671 NLRC3Q7RTR2 1065 aa9.04□□□□□ -0.96
NPM1-204ENST00000517671 SPACA3Q8IXA5 215 aa9.04□□□□□ -0.96
NPM1-204ENST00000517671 FIBCD1Q8N539 461 aa9.04□□□□□ -0.96
NPM1-204ENST00000517671 AGBL5Q8NDL9 886 aa9.04□□□□□ -0.96
NPM1-204ENST00000517671 SYTL5Q8TDW5 730 aaPredicted RBP9.04□□□□□ -0.96
NPM1-204ENST00000517671 PPP1R13LQ8WUF5 828 aa9.04□□□□□ -0.96
NPM1-204ENST00000517671 TMEM40Q8WWA1 233 aa9.04□□□□□ -0.96
NPM1-204ENST00000517671 COPS5Q92905 334 aa9.04□□□□□ -0.96
NPM1-204ENST00000517671 TNPO1Q92973 898 aaKnown RBP9.04□□□□□ -0.96
NPM1-204ENST00000517671 ATP6V0A1Q93050 837 aa9.04□□□□□ -0.96
NPM1-204ENST00000517671 IL17RAQ96F46 866 aa9.04□□□□□ -0.96
NPM1-204ENST00000517671 CTAGE1Q96RT6 745 aa9.04□□□□□ -0.96
NPM1-204ENST00000517671 C17orf80Q9BSJ5 609 aa9.04□□□□□ -0.96
NPM1-204ENST00000517671 EFR3BQ9Y2G0 817 aa9.04□□□□□ -0.96
NPM1-204ENST00000517671 FRMPD2Q68DX3 1309 aaPredicted RBP9.03□□□□□ -0.96
NPM1-204ENST00000517671 PAX4O43316 350 aa9.03□□□□□ -0.96
NPM1-204ENST00000517671 GNL2Q13823 731 aaKnown RBP9.03□□□□□ -0.96
NPM1-204ENST00000517671 GNPTABQ3T906 1256 aa9.03□□□□□ -0.96
NPM1-204ENST00000517671 USH1GQ495M9 461 aa9.03□□□□□ -0.96
NPM1-204ENST00000517671 RRP12Q5JTH9 1297 aaKnown RBP9.03□□□□□ -0.96
NPM1-204ENST00000517671 CELF3Q5SZQ8 465 aaKnown RBP9.03□□□□□ -0.96
NPM1-204ENST00000517671 EP400NLQ6ZTU2 488 aa9.03□□□□□ -0.96
NPM1-204ENST00000517671 RSPH3Q86UC2 560 aa9.03□□□□□ -0.96
NPM1-204ENST00000517671 SUGP1Q8IWZ8 645 aaKnown RBP9.03□□□□□ -0.96
NPM1-204ENST00000517671 DHX38Q92620 1227 aaKnown RBP9.03□□□□□ -0.96
NPM1-204ENST00000517671 ANKS1AQ92625 1134 aa9.03□□□□□ -0.96
NPM1-204ENST00000517671 EDAQ92838 391 aa9.03□□□□□ -0.96
NPM1-204ENST00000517671 SNX27Q96L92 541 aa9.03□□□□□ -0.96
NPM1-204ENST00000517671 SPATA33Q96N06 139 aa9.03□□□□□ -0.96
NPM1-204ENST00000517671 TAAR1Q96RJ0 339 aa9.03□□□□□ -0.96
NPM1-204ENST00000517671 SEC62Q99442 399 aaKnown RBP9.03□□□□□ -0.96
NPM1-204ENST00000517671 ALG1Q9BT22 464 aa9.03□□□□□ -0.96
NPM1-204ENST00000517671 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.03□□□□□ -0.967e-10■■■■□ 21.4
NPM1-204ENST00000517671 KAT14Q9H8E8 782 aa9.03□□□□□ -0.96
NPM1-204ENST00000517671 CNNM2Q9H8M5 875 aa9.03□□□□□ -0.96
NPM1-204ENST00000517671 MLXIPQ9HAP2 919 aa9.03□□□□□ -0.96
NPM1-204ENST00000517671 CLDND1Q9NY35 253 aa9.03□□□□□ -0.96
NPM1-204ENST00000517671 RCAN3Q9UKA8 241 aa9.03□□□□□ -0.96
NPM1-204ENST00000517671 CAPN6Q9Y6Q1 641 aa9.03□□□□□ -0.96
NPM1-204ENST00000517671 DDX49Q9Y6V7 483 aaKnown RBP9.03□□□□□ -0.96
NPM1-204ENST00000517671 BAZ2AQ9UIF9 1905 aaKnown RBP9.02□□□□□ -0.96
NPM1-204ENST00000517671 H3BQ06 376 aaPredicted RBP9.02□□□□□ -0.97
NPM1-204ENST00000517671 NOP56O00567 594 aaKnown RBP9.02□□□□□ -0.97
NPM1-204ENST00000517671 ZNF213O14771 459 aa9.02□□□□□ -0.97
NPM1-204ENST00000517671 MX1P20591 662 aa9.02□□□□□ -0.97
NPM1-204ENST00000517671 BMPR1AP36894 532 aa9.02□□□□□ -0.97
NPM1-204ENST00000517671 GHRHRQ02643 423 aa9.02□□□□□ -0.97
NPM1-204ENST00000517671 RAD51AP2Q09MP3 1159 aa9.02□□□□□ -0.97
NPM1-204ENST00000517671 SMAD4Q13485 552 aaKnown RBP9.02□□□□□ -0.97
NPM1-204ENST00000517671 NEDD9Q14511 834 aa9.02□□□□□ -0.97
NPM1-204ENST00000517671 TCEAL5Q5H9L2 206 aa9.02□□□□□ -0.97
NPM1-204ENST00000517671 TAF2Q6P1X5 1199 aa9.02□□□□□ -0.97
NPM1-204ENST00000517671 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.02□□□□□ -0.976e-11■■■□□ 18.4
NPM1-204ENST00000517671 STOX1Q6ZVD7 989 aa9.02□□□□□ -0.97
NPM1-204ENST00000517671 RPAINQ86UA6 219 aa9.02□□□□□ -0.97
NPM1-204ENST00000517671 GIMAP8Q8ND71 665 aaPredicted RBP9.02□□□□□ -0.97
NPM1-204ENST00000517671 PIWIL2Q8TC59 973 aaKnown RBP9.02□□□□□ -0.97
NPM1-204ENST00000517671 PI4K2BQ8TCG2 481 aa9.02□□□□□ -0.97
NPM1-204ENST00000517671 RASGRP4Q8TDF6 673 aa9.02□□□□□ -0.97
NPM1-204ENST00000517671 RNF141Q8WVD5 230 aa9.02□□□□□ -0.97
NPM1-204ENST00000517671 CPLX3Q8WVH0 158 aa9.02□□□□□ -0.97
NPM1-204ENST00000517671 CHMP4CQ96CF2 233 aa9.02□□□□□ -0.97
NPM1-204ENST00000517671 HSPA12BQ96MM6 686 aa9.02□□□□□ -0.97
NPM1-204ENST00000517671 KREMEN1Q96MU8 473 aa9.02□□□□□ -0.97
NPM1-204ENST00000517671 AMNQ9BXJ7 453 aa9.02□□□□□ -0.97
NPM1-204ENST00000517671 IFIH1Q9BYX4 1025 aaKnown RBP9.02□□□□□ -0.97
NPM1-204ENST00000517671 PXMP2Q9NR77 195 aa9.02□□□□□ -0.97
NPM1-204ENST00000517671 ZNF215Q9UL58 517 aaPredicted RBP9.02□□□□□ -0.97
NPM1-204ENST00000517671 TCF20Q9UGU0 1960 aaKnown RBP9.01□□□□□ -0.97
NPM1-204ENST00000517671 SCN10AQ9Y5Y9 1956 aa9.01□□□□□ -0.97
NPM1-204ENST00000517671 MUC6Q6W4X9 2439 aa9.01□□□□□ -0.97
NPM1-204ENST00000517671 NRCAMQ92823 1304 aa9.01□□□□□ -0.97
NPM1-204ENST00000517671 PARP1P09874 1014 aaKnown RBP9.01□□□□□ -0.97
NPM1-204ENST00000517671 NME1P15531 152 aaKnown RBP9.01□□□□□ -0.97
NPM1-204ENST00000517671 CCND2P30279 289 aa9.01□□□□□ -0.97
NPM1-204ENST00000517671 HOXC8P31273 242 aa9.01□□□□□ -0.97
NPM1-204ENST00000517671 CCNFP41002 786 aa9.01□□□□□ -0.97
NPM1-204ENST00000517671 HSD17B4P51659 736 aa9.01□□□□□ -0.97
NPM1-204ENST00000517671 TNK2Q07912 1038 aa9.01□□□□□ -0.97
NPM1-204ENST00000517671 CDC37Q16543 378 aaPredicted RBP9.01□□□□□ -0.97
NPM1-204ENST00000517671 ADGRF4Q8IZF3 695 aa9.01□□□□□ -0.97
NPM1-204ENST00000517671 P2RX5Q93086 422 aa9.01□□□□□ -0.97
NPM1-204ENST00000517671 FTHL17Q9BXU8 183 aa9.01□□□□□ -0.97
NPM1-204ENST00000517671 CD207Q9UJ71 328 aa9.01□□□□□ -0.97
NPM1-204ENST00000517671 PPT2Q9UMR5 302 aa9.01□□□□□ -0.97
NPM1-204ENST00000517671 SQORQ9Y6N5 450 aa9.01□□□□□ -0.97
NPM1-204ENST00000517671 LRRC37A2A6NM11 1700 aa9□□□□□ -0.97
NPM1-204ENST00000517671 MEIS3P2A8K0S8 358 aa9□□□□□ -0.97
NPM1-204ENST00000517671 STXBP3O00186 592 aa9□□□□□ -0.97
NPM1-204ENST00000517671 MBTPS2O43462 519 aa9□□□□□ -0.97
NPM1-204ENST00000517671 DHX16O60231 1041 aaKnown RBP9□□□□□ -0.97
NPM1-204ENST00000517671 EYA4O95677 639 aa9□□□□□ -0.97
NPM1-204ENST00000517671 CFBP00751 764 aa9□□□□□ -0.97
NPM1-204ENST00000517671 XRRA1Q6P2D8 792 aa9□□□□□ -0.97
NPM1-204ENST00000517671 TMCO2Q7Z6W1 182 aaPredicted RBP9□□□□□ -0.97
NPM1-204ENST00000517671 C16orf70Q9BSU1 422 aa9□□□□□ -0.97
NPM1-204ENST00000517671 ASPNQ9BXN1 380 aa9□□□□□ -0.97
NPM1-204ENST00000517671 TRIT1Q9H3H1 467 aaKnown RBP9□□□□□ -0.97
NPM1-204ENST00000517671 INCENPQ9NQS7 918 aa9□□□□□ -0.97
NPM1-204ENST00000517671 CCDC171Q6TFL3 1326 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms