RNA–Protein interactions for RNA: ENST00000516409.1

SCARNA15.2-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 127 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.2-201ENST00000516409 SORBS1Q9BX66 1292 aaKnown RBP3.88□□□□□ -1.79
SCARNA15.2-201ENST00000516409 TMEM120AQ9BXJ8 343 aa3.88□□□□□ -1.79
SCARNA15.2-201ENST00000516409 TRIM54Q9BYV2 358 aa3.88□□□□□ -1.79
SCARNA15.2-201ENST00000516409 OSBPL6Q9BZF3 934 aa3.88□□□□□ -1.79
SCARNA15.2-201ENST00000516409 MRPL46Q9H2W6 279 aaKnown RBP3.88□□□□□ -1.79
SCARNA15.2-201ENST00000516409 CNTD2Q9H8S5 307 aa3.88□□□□□ -1.79
SCARNA15.2-201ENST00000516409 BCO1Q9HAY6 547 aa3.88□□□□□ -1.79
SCARNA15.2-201ENST00000516409 SLAMF7Q9NQ25 335 aa3.88□□□□□ -1.79
SCARNA15.2-201ENST00000516409 VPS45Q9NRW7 570 aa3.88□□□□□ -1.79
SCARNA15.2-201ENST00000516409 DACT1Q9NYF0 836 aa3.88□□□□□ -1.79
SCARNA15.2-201ENST00000516409 MYO1AQ9UBC5 1043 aa3.88□□□□□ -1.79
SCARNA15.2-201ENST00000516409 Q9UFV3 132 aa3.88□□□□□ -1.79
SCARNA15.2-201ENST00000516409 SRRDQ9UH36 339 aa3.88□□□□□ -1.79
SCARNA15.2-201ENST00000516409 PGAP2Q9UHJ9 254 aa3.88□□□□□ -1.79
SCARNA15.2-201ENST00000516409 CROTQ9UKG9 612 aa3.88□□□□□ -1.79
SCARNA15.2-201ENST00000516409 ANGEL1Q9UNK9 670 aaKnown RBP3.88□□□□□ -1.79
SCARNA15.2-201ENST00000516409 RUVBL1Q9Y265 456 aaKnown RBP3.88□□□□□ -1.79
SCARNA15.2-201ENST00000516409 ACTL7AQ9Y615 435 aa3.88□□□□□ -1.79
SCARNA15.2-201ENST00000516409 RPS6KL1Q9Y6S9 549 aa3.88□□□□□ -1.79
SCARNA15.2-201ENST00000516409 TTBK1Q5TCY1 1321 aaPredicted RBP3.88□□□□□ -1.79
SCARNA15.2-201ENST00000516409 TRIM43BA6NCK2 446 aa3.87□□□□□ -1.79
SCARNA15.2-201ENST00000516409 OR14I1A6ND48 311 aa3.87□□□□□ -1.79
SCARNA15.2-201ENST00000516409 AQP12BA6NM10 295 aa3.87□□□□□ -1.79
SCARNA15.2-201ENST00000516409 J3KRW8 73 aa3.87□□□□□ -1.79
SCARNA15.2-201ENST00000516409 EIF3FO00303 357 aaPredicted RBP3.87□□□□□ -1.79
SCARNA15.2-201ENST00000516409 ACKR2O00590 384 aa3.87□□□□□ -1.79
SCARNA15.2-201ENST00000516409 ARHGAP6O43182 974 aa3.87□□□□□ -1.79
SCARNA15.2-201ENST00000516409 ITGA10O75578 1167 aa3.87□□□□□ -1.79
SCARNA15.2-201ENST00000516409 ALDH1A2O94788 518 aa3.87□□□□□ -1.79
SCARNA15.2-201ENST00000516409 LDHCP07864 332 aa3.87□□□□□ -1.79
SCARNA15.2-201ENST00000516409 CYP2C8P10632 490 aa3.87□□□□□ -1.79
SCARNA15.2-201ENST00000516409 FBLN1P23142 703 aa3.87□□□□□ -1.79
SCARNA15.2-201ENST00000516409 SSTR4P31391 388 aa3.87□□□□□ -1.79
SCARNA15.2-201ENST00000516409 PHKA1P46020 1223 aa3.87□□□□□ -1.79
SCARNA15.2-201ENST00000516409 KCNJ5P48544 419 aa3.87□□□□□ -1.79
SCARNA15.2-201ENST00000516409 PIK3CGP48736 1102 aa3.87□□□□□ -1.79
SCARNA15.2-201ENST00000516409 KCNQ1P51787 676 aa3.87□□□□□ -1.79
SCARNA15.2-201ENST00000516409 ITGA8P53708 1063 aa3.87□□□□□ -1.79
SCARNA15.2-201ENST00000516409 ITGA1P56199 1179 aa3.87□□□□□ -1.79
SCARNA15.2-201ENST00000516409 RASSF7Q02833 373 aa3.87□□□□□ -1.79
SCARNA15.2-201ENST00000516409 DDX10Q13206 875 aaKnown RBP3.87□□□□□ -1.79
SCARNA15.2-201ENST00000516409 TBX2Q13207 712 aaPredicted RBP3.87□□□□□ -1.79
SCARNA15.2-201ENST00000516409 MTM1Q13496 603 aa3.87□□□□□ -1.79
SCARNA15.2-201ENST00000516409 C19orf54Q5BKX5 351 aa3.87□□□□□ -1.79
SCARNA15.2-201ENST00000516409 PRSS36Q5K4E3 855 aa3.87□□□□□ -1.79
SCARNA15.2-201ENST00000516409 DACT2Q5SW24 774 aa3.87□□□□□ -1.79
SCARNA15.2-201ENST00000516409 GJC2Q5T442 439 aaPredicted RBP3.87□□□□□ -1.79
SCARNA15.2-201ENST00000516409 RRAGBQ5VZM2 374 aa3.87□□□□□ -1.79
SCARNA15.2-201ENST00000516409 MZT2AQ6P582 158 aa3.87□□□□□ -1.79
SCARNA15.2-201ENST00000516409 CYP26C1Q6V0L0 522 aa3.87□□□□□ -1.79
SCARNA15.2-201ENST00000516409 CXXC5Q7LFL8 322 aaKnown RBP3.87□□□□□ -1.79
SCARNA15.2-201ENST00000516409 TAS1R1Q7RTX1 841 aa3.87□□□□□ -1.79
SCARNA15.2-201ENST00000516409 DTX1Q86Y01 620 aa3.87□□□□□ -1.79
SCARNA15.2-201ENST00000516409 ANKRD18AQ8IVF6 992 aa3.87□□□□□ -1.79
SCARNA15.2-201ENST00000516409 TRMT2AQ8IZ69 625 aaKnown RBP3.87□□□□□ -1.79
SCARNA15.2-201ENST00000516409 PCSK9Q8NBP7 692 aaKnown RBP3.87□□□□□ -1.79
SCARNA15.2-201ENST00000516409 IL17REQ8NFR9 667 aa3.87□□□□□ -1.79
SCARNA15.2-201ENST00000516409 OR6B3Q8NGW1 331 aa3.87□□□□□ -1.79
SCARNA15.2-201ENST00000516409 SMARCC2Q8TAQ2 1214 aa3.87□□□□□ -1.79
SCARNA15.2-201ENST00000516409 IPO4Q8TEX9 1081 aaKnown RBP3.87□□□□□ -1.79
SCARNA15.2-201ENST00000516409 KBTBD7Q8WVZ9 684 aa3.87□□□□□ -1.79
SCARNA15.2-201ENST00000516409 TRIM43Q96BQ3 446 aaPredicted RBP3.87□□□□□ -1.79
SCARNA15.2-201ENST00000516409 NMD3Q96D46 503 aaKnown RBP3.87□□□□□ -1.79
SCARNA15.2-201ENST00000516409 CYFIP2Q96F07 1278 aa3.87□□□□□ -1.79
SCARNA15.2-201ENST00000516409 SNX22Q96L94 193 aa3.87□□□□□ -1.79
SCARNA15.2-201ENST00000516409 PAGR1Q9BTK6 254 aa3.87□□□□□ -1.79
SCARNA15.2-201ENST00000516409 TMEM140Q9NV12 185 aa3.87□□□□□ -1.79
SCARNA15.2-201ENST00000516409 SPATA6Q9NWH7 488 aaPredicted RBP3.87□□□□□ -1.79
SCARNA15.2-201ENST00000516409 ING3Q9NXR8 418 aa3.87□□□□□ -1.79
SCARNA15.2-201ENST00000516409 GPRC5DQ9NZD1 345 aa3.87□□□□□ -1.79
SCARNA15.2-201ENST00000516409 MAN2B2Q9Y2E5 1009 aa3.87□□□□□ -1.79
SCARNA15.2-201ENST00000516409 SCINQ9Y6U3 715 aa3.87□□□□□ -1.79
SCARNA15.2-201ENST00000516409 FAM181BA6NEQ2 426 aa3.86□□□□□ -1.79
SCARNA15.2-201ENST00000516409 GOLGA6L3A6NEY3 463 aa3.86□□□□□ -1.79
SCARNA15.2-201ENST00000516409 PRSS47A8MTI9 375 aa3.86□□□□□ -1.79
SCARNA15.2-201ENST00000516409 TMEM233B4DJY2 109 aa3.86□□□□□ -1.79
SCARNA15.2-201ENST00000516409 EYA2O00167 538 aa3.86□□□□□ -1.79
SCARNA15.2-201ENST00000516409 BTN3A1O00481 513 aa3.86□□□□□ -1.79
SCARNA15.2-201ENST00000516409 PODXLO00592 558 aa3.86□□□□□ -1.79
SCARNA15.2-201ENST00000516409 NPC1O15118 1278 aa3.86□□□□□ -1.79
SCARNA15.2-201ENST00000516409 TBC1D4O60343 1298 aa3.86□□□□□ -1.79
SCARNA15.2-201ENST00000516409 MATN4O95460 622 aa3.86□□□□□ -1.79
SCARNA15.2-201ENST00000516409 NDST3O95803 873 aa3.86□□□□□ -1.79
SCARNA15.2-201ENST00000516409 MT-ND5P03915 603 aa3.86□□□□□ -1.79
SCARNA15.2-201ENST00000516409 ANXA2P07355 339 aaKnown RBP3.86□□□□□ -1.79
SCARNA15.2-201ENST00000516409 SBK3P0C264 359 aa3.86□□□□□ -1.79
SCARNA15.2-201ENST00000516409 FTH1P19P0C7X4 201 aa3.86□□□□□ -1.79
SCARNA15.2-201ENST00000516409 MYL4P12829 197 aa3.86□□□□□ -1.79
SCARNA15.2-201ENST00000516409 SPINK2P20155 84 aa3.86□□□□□ -1.79
SCARNA15.2-201ENST00000516409 VIPR1P32241 457 aa3.86□□□□□ -1.79
SCARNA15.2-201ENST00000516409 GUCY1A2P33402 732 aa3.86□□□□□ -1.79
SCARNA15.2-201ENST00000516409 PTPN7P35236 360 aa3.86□□□□□ -1.79
SCARNA15.2-201ENST00000516409 GSK3AP49840 483 aa3.86□□□□□ -1.79
SCARNA15.2-201ENST00000516409 ARFIP2P53365 341 aa3.86□□□□□ -1.79
SCARNA15.2-201ENST00000516409 NCKAP1LP55160 1127 aa3.86□□□□□ -1.79
SCARNA15.2-201ENST00000516409 CTXN1P60606 82 aa3.86□□□□□ -1.79
SCARNA15.2-201ENST00000516409 YBX1P67809 324 aaKnown RBP3.86□□□□□ -1.79
SCARNA15.2-201ENST00000516409 TMEM62Q0P6H9 643 aa3.86□□□□□ -1.79
SCARNA15.2-201ENST00000516409 SLC13A2Q13183 592 aa3.86□□□□□ -1.79
SCARNA15.2-201ENST00000516409 TIGD6Q17RP2 521 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms