RNA–Protein interactions for RNA: ENST00000516329.1

SNORA40.12-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 111 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.12-201ENST00000516329 MANSC1Q9H8J5 431 aa4.33□□□□□ -1.72
SNORA40.12-201ENST00000516329 KLHL11Q9NVR0 708 aa4.33□□□□□ -1.72
SNORA40.12-201ENST00000516329 SLC23A1Q9UHI7 598 aa4.33□□□□□ -1.72
SNORA40.12-201ENST00000516329 ATP11BQ9Y2G3 1177 aa4.33□□□□□ -1.72
SNORA40.12-201ENST00000516329 DMRT1Q9Y5R6 373 aa4.33□□□□□ -1.72
SNORA40.12-201ENST00000516329 FPGT-TNNI3KV9GXZ4 949 aa4.33□□□□□ -1.72
SNORA40.12-201ENST00000516329 AATKQ6ZMQ8 1374 aa4.32□□□□□ -1.72
SNORA40.12-201ENST00000516329 MYBBP1AQ9BQG0 1328 aaKnown RBP4.32□□□□□ -1.72
SNORA40.12-201ENST00000516329 TCRBV7S2A1N4TA0A589 114 aa4.32□□□□□ -1.72
SNORA40.12-201ENST00000516329 GAGE12BA1L429 117 aa4.32□□□□□ -1.72
SNORA40.12-201ENST00000516329 GRID2IPA4D2P6 1211 aa4.32□□□□□ -1.72
SNORA40.12-201ENST00000516329 CDHR4A6H8M9 788 aa4.32□□□□□ -1.72
SNORA40.12-201ENST00000516329 GAGE12HA6NDE8 117 aa4.32□□□□□ -1.72
SNORA40.12-201ENST00000516329 TMEM200CA6NKL6 621 aa4.32□□□□□ -1.72
SNORA40.12-201ENST00000516329 KIAA0391O15091 583 aaKnown RBP4.32□□□□□ -1.72
SNORA40.12-201ENST00000516329 PCDHGA12O60330 932 aa4.32□□□□□ -1.72
SNORA40.12-201ENST00000516329 DDCP20711 480 aa4.32□□□□□ -1.72
SNORA40.12-201ENST00000516329 GUCY1B3Q02153 619 aa4.32□□□□□ -1.72
SNORA40.12-201ENST00000516329 RESTQ13127 1097 aa4.32□□□□□ -1.72
SNORA40.12-201ENST00000516329 TP53BP2Q13625 1128 aa4.32□□□□□ -1.72
SNORA40.12-201ENST00000516329 UBXN2BQ14CS0 331 aa4.32□□□□□ -1.72
SNORA40.12-201ENST00000516329 OTUD7BQ6GQQ9 843 aa4.32□□□□□ -1.72
SNORA40.12-201ENST00000516329 PCSK4Q6UW60 755 aa4.32□□□□□ -1.72
SNORA40.12-201ENST00000516329 CMTR2Q8IYT2 770 aaKnown RBP4.32□□□□□ -1.72
SNORA40.12-201ENST00000516329 BEND2Q8NDZ0 799 aa4.32□□□□□ -1.72
SNORA40.12-201ENST00000516329 CASKIN2Q8WXE0 1202 aa4.32□□□□□ -1.72
SNORA40.12-201ENST00000516329 FAXDC2Q96IV6 333 aa4.32□□□□□ -1.72
SNORA40.12-201ENST00000516329 ADAM2Q99965 735 aa4.32□□□□□ -1.72
SNORA40.12-201ENST00000516329 REXO4Q9GZR2 422 aaKnown RBP4.32□□□□□ -1.72
SNORA40.12-201ENST00000516329 SERHL2Q9H4I8 314 aa4.32□□□□□ -1.72
SNORA40.12-201ENST00000516329 CYP4F11Q9HBI6 524 aa4.32□□□□□ -1.72
SNORA40.12-201ENST00000516329 C11orf21Q9P2W6 132 aa4.32□□□□□ -1.72
SNORA40.12-201ENST00000516329 SAP30BPQ9UHR5 308 aaKnown RBP4.32□□□□□ -1.72
SNORA40.12-201ENST00000516329 PCDHGA9Q9Y5G4 932 aaKnown RBP4.32□□□□□ -1.72
SNORA40.12-201ENST00000516329 PCDHGA8Q9Y5G5 932 aa4.32□□□□□ -1.72
SNORA40.12-201ENST00000516329 PCDHGA7Q9Y5G6 932 aa4.32□□□□□ -1.72
SNORA40.12-201ENST00000516329 PCDHGA6Q9Y5G7 932 aa4.32□□□□□ -1.72
SNORA40.12-201ENST00000516329 PCDHGA3Q9Y5H0 932 aa4.32□□□□□ -1.72
SNORA40.12-201ENST00000516329 CCDC78A2IDD5 438 aa4.31□□□□□ -1.72
SNORA40.12-201ENST00000516329 KLHL33A6NCF5 533 aa4.31□□□□□ -1.72
SNORA40.12-201ENST00000516329 MARCH11A6NNE9 402 aa4.31□□□□□ -1.72
SNORA40.12-201ENST00000516329 GABRDO14764 452 aa4.31□□□□□ -1.72
SNORA40.12-201ENST00000516329 TEX33O43247 280 aa4.31□□□□□ -1.72
SNORA40.12-201ENST00000516329 B3GALT2O43825 422 aa4.31□□□□□ -1.72
SNORA40.12-201ENST00000516329 PRSS23O95084 383 aa4.31□□□□□ -1.72
SNORA40.12-201ENST00000516329 HLA-DOAP06340 250 aa4.31□□□□□ -1.72
SNORA40.12-201ENST00000516329 ELANEP08246 267 aa4.31□□□□□ -1.72
SNORA40.12-201ENST00000516329 ZEB1P37275 1124 aaPredicted RBP4.31□□□□□ -1.72
SNORA40.12-201ENST00000516329 SLC16A1P53985 500 aa4.31□□□□□ -1.72
SNORA40.12-201ENST00000516329 KIF23Q02241 960 aaPredicted RBP4.31□□□□□ -1.72
SNORA40.12-201ENST00000516329 CREMQ03060 361 aa4.31□□□□□ -1.72
SNORA40.12-201ENST00000516329 OCA2Q04671 838 aa4.31□□□□□ -1.72
SNORA40.12-201ENST00000516329 HECTD2Q5U5R9 776 aa4.31□□□□□ -1.72
SNORA40.12-201ENST00000516329 SEM1Q6ZVN7 128 aa4.31□□□□□ -1.72
SNORA40.12-201ENST00000516329 MIGA2Q7L4E1 593 aa4.31□□□□□ -1.72
SNORA40.12-201ENST00000516329 RSPH3Q86UC2 560 aa4.31□□□□□ -1.72
SNORA40.12-201ENST00000516329 PNMA8AQ86V59 439 aaPredicted RBP4.31□□□□□ -1.72
SNORA40.12-201ENST00000516329 MAPKAPK5Q8IW41 473 aa4.31□□□□□ -1.72
SNORA40.12-201ENST00000516329 ARHGEF19Q8IW93 802 aa4.31□□□□□ -1.72
SNORA40.12-201ENST00000516329 LCORLQ8N3X6 602 aa4.31□□□□□ -1.72
SNORA40.12-201ENST00000516329 GPR150Q8NGU9 434 aa4.31□□□□□ -1.72
SNORA40.12-201ENST00000516329 SSH1Q8WYL5 1049 aa4.31□□□□□ -1.72
SNORA40.12-201ENST00000516329 RNF31Q96EP0 1072 aa4.31□□□□□ -1.72
SNORA40.12-201ENST00000516329 CYFIP2Q96F07 1278 aa4.31□□□□□ -1.72
SNORA40.12-201ENST00000516329 TMX3Q96JJ7 454 aa4.31□□□□□ -1.72
SNORA40.12-201ENST00000516329 TEKT5Q96M29 485 aa4.31□□□□□ -1.72
SNORA40.12-201ENST00000516329 USP25Q9UHP3 1055 aa4.31□□□□□ -1.72
SNORA40.12-201ENST00000516329 PCDHA13Q9Y5I0 950 aa4.31□□□□□ -1.72
SNORA40.12-201ENST00000516329 COL4A3BPQ9Y5P4 624 aa4.31□□□□□ -1.72
SNORA40.12-201ENST00000516329 A0A1B0GTW7 788 aa4.3□□□□□ -1.72
SNORA40.12-201ENST00000516329 SHTN1A0MZ66 631 aa4.3□□□□□ -1.72
SNORA40.12-201ENST00000516329 FZD9O00144 591 aa4.3□□□□□ -1.72
SNORA40.12-201ENST00000516329 SPDEFO95238 335 aa4.3□□□□□ -1.72
SNORA40.12-201ENST00000516329 GCP02774 474 aa4.3□□□□□ -1.72
SNORA40.12-201ENST00000516329 CFIP05156 583 aa4.3□□□□□ -1.72
SNORA40.12-201ENST00000516329 FGFR4P22455 802 aa4.3□□□□□ -1.72
SNORA40.12-201ENST00000516329 BMPR1AP36894 532 aa4.3□□□□□ -1.72
SNORA40.12-201ENST00000516329 INHBEP58166 350 aa4.3□□□□□ -1.72
SNORA40.12-201ENST00000516329 HSD11B2P80365 405 aa4.3□□□□□ -1.72
SNORA40.12-201ENST00000516329 MXRA7P84157 204 aa4.3□□□□□ -1.72
SNORA40.12-201ENST00000516329 TARDBPQ13148 414 aaKnown RBP eCLIP4.3□□□□□ -1.72
SNORA40.12-201ENST00000516329 IL10RAQ13651 578 aa4.3□□□□□ -1.72
SNORA40.12-201ENST00000516329 PTPN21Q16825 1174 aa4.3□□□□□ -1.72
SNORA40.12-201ENST00000516329 KRTAP15-1Q3LI76 137 aa4.3□□□□□ -1.72
SNORA40.12-201ENST00000516329 C3orf36Q3SXR2 165 aa4.3□□□□□ -1.72
SNORA40.12-201ENST00000516329 Q6YL49 198 aa4.3□□□□□ -1.72
SNORA40.12-201ENST00000516329 DCBLD1Q8N8Z6 715 aa4.3□□□□□ -1.72
SNORA40.12-201ENST00000516329 TBC1D15Q8TC07 691 aa4.3□□□□□ -1.72
SNORA40.12-201ENST00000516329 ASB10Q8WXI3 467 aa4.3□□□□□ -1.72
SNORA40.12-201ENST00000516329 KAT5Q92993 513 aa4.3□□□□□ -1.72
SNORA40.12-201ENST00000516329 RNPEPQ9H4A4 650 aa4.3□□□□□ -1.72
SNORA40.12-201ENST00000516329 TDP1Q9NUW8 608 aa4.3□□□□□ -1.72
SNORA40.12-201ENST00000516329 MRFAP1Q9Y605 127 aa4.3□□□□□ -1.72
SNORA40.12-201ENST00000516329 CCDC154A6NI56 674 aa4.29□□□□□ -1.72
SNORA40.12-201ENST00000516329 CDKL5O76039 1030 aa4.29□□□□□ -1.72
SNORA40.12-201ENST00000516329 GPANK1O95872 356 aa4.29□□□□□ -1.72
SNORA40.12-201ENST00000516329 ITGAMP11215 1152 aa4.29□□□□□ -1.72
SNORA40.12-201ENST00000516329 ALAS1P13196 640 aa4.29□□□□□ -1.72
SNORA40.12-201ENST00000516329 PROZP22891 400 aa4.29□□□□□ -1.72
SNORA40.12-201ENST00000516329 GCSHP23434 173 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms