RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 STAMBPL1Q96FJ0 436 aa7.96□□□□□ -1.13
CLIP1-205ENST00000514271 CHMP6Q96FZ7 201 aa7.96□□□□□ -1.13
CLIP1-205ENST00000514271 MCOLN1Q9GZU1 580 aa7.96□□□□□ -1.13
CLIP1-205ENST00000514271 R3HDMLQ9H3Y0 253 aa7.96□□□□□ -1.13
CLIP1-205ENST00000514271 ODF2LQ9ULJ1 636 aa7.96□□□□□ -1.13
CLIP1-205ENST00000514271 ESYT3A0FGR9 886 aa7.96□□□□□ -1.14
CLIP1-205ENST00000514271 PMM2O15305 246 aa7.96□□□□□ -1.14
CLIP1-205ENST00000514271 IL1BP01584 269 aa7.96□□□□□ -1.14
CLIP1-205ENST00000514271 CYBAP13498 195 aa7.96□□□□□ -1.14
CLIP1-205ENST00000514271 TMOD1P28289 359 aa7.96□□□□□ -1.14
CLIP1-205ENST00000514271 ZNF131P52739 623 aa7.96□□□□□ -1.14
CLIP1-205ENST00000514271 SLC12A3P55017 1021 aa7.96□□□□□ -1.14
CLIP1-205ENST00000514271 EIF3BP55884 814 aaKnown RBP7.96□□□□□ -1.14
CLIP1-205ENST00000514271 REXO1Q8N1G1 1221 aaKnown RBP7.96□□□□□ -1.14
CLIP1-205ENST00000514271 RDM1Q8NG50 284 aa7.96□□□□□ -1.14
CLIP1-205ENST00000514271 CCDC26Q8TAB7 109 aa7.96□□□□□ -1.14
CLIP1-205ENST00000514271 SENP7Q9BQF6 1050 aa7.96□□□□□ -1.14
CLIP1-205ENST00000514271 LRMDAQ9H2I8 198 aa7.96□□□□□ -1.14
CLIP1-205ENST00000514271 PXMP2Q9NR77 195 aa7.96□□□□□ -1.14
CLIP1-205ENST00000514271 KLF15Q9UIH9 416 aa7.96□□□□□ -1.14
CLIP1-205ENST00000514271 DAAM1Q9Y4D1 1078 aa7.96□□□□□ -1.14
CLIP1-205ENST00000514271 PTCH2Q9Y6C5 1203 aa7.96□□□□□ -1.14
CLIP1-205ENST00000514271 BAZ2BQ9UIF8 2168 aaKnown RBP7.96□□□□□ -1.14
CLIP1-205ENST00000514271 COQ9O75208 318 aa7.95□□□□□ -1.14
CLIP1-205ENST00000514271 GJB1P08034 283 aa7.95□□□□□ -1.14
CLIP1-205ENST00000514271 SREBF1P36956 1147 aa7.95□□□□□ -1.14
CLIP1-205ENST00000514271 RPS6P62753 249 aaKnown RBP7.95□□□□□ -1.14
CLIP1-205ENST00000514271 PTPN11Q06124 597 aaPredicted RBP7.95□□□□□ -1.14
CLIP1-205ENST00000514271 HEATR3Q7Z4Q2 680 aa7.95□□□□□ -1.14
CLIP1-205ENST00000514271 MZB1Q8WU39 189 aa7.95□□□□□ -1.14
CLIP1-205ENST00000514271 RAD54LQ92698 747 aa7.95□□□□□ -1.14
CLIP1-205ENST00000514271 PABPC3Q9H361 631 aaKnown RBP7.95□□□□□ -1.14
CLIP1-205ENST00000514271 PAK6Q9NQU5 681 aaPredicted RBP7.95□□□□□ -1.14
CLIP1-205ENST00000514271 KANSL3Q9P2N6 904 aa7.95□□□□□ -1.14
CLIP1-205ENST00000514271 LNPEPQ9UIQ6 1025 aa7.95□□□□□ -1.14
CLIP1-205ENST00000514271 NAGPAQ9UK23 515 aa7.95□□□□□ -1.14
CLIP1-205ENST00000514271 SMAPO00193 183 aa7.95□□□□□ -1.14
CLIP1-205ENST00000514271 TBX3O15119 743 aa7.95□□□□□ -1.14
CLIP1-205ENST00000514271 CAND2O75155 1236 aa7.95□□□□□ -1.14
CLIP1-205ENST00000514271 DUSP11O75319 330 aaKnown RBP7.95□□□□□ -1.14
CLIP1-205ENST00000514271 ITGA4P13612 1032 aa7.95□□□□□ -1.14
CLIP1-205ENST00000514271 NQO1P15559 274 aaKnown RBP7.95□□□□□ -1.14
CLIP1-205ENST00000514271 CXCR5P32302 372 aa7.95□□□□□ -1.14
CLIP1-205ENST00000514271 CIITAP33076 1130 aa7.95□□□□□ -1.14
CLIP1-205ENST00000514271 AUHQ13825 339 aaKnown RBP7.95□□□□□ -1.14
CLIP1-205ENST00000514271 BAATQ14032 418 aaPredicted RBP7.95□□□□□ -1.14
CLIP1-205ENST00000514271 TTLL4Q14679 1199 aa7.95□□□□□ -1.14
CLIP1-205ENST00000514271 ARHGEF16Q5VV41 709 aa7.95□□□□□ -1.14
CLIP1-205ENST00000514271 TTC27Q6P3X3 843 aa7.95□□□□□ -1.14
CLIP1-205ENST00000514271 FAM114A1Q8IWE2 563 aa7.95□□□□□ -1.14
CLIP1-205ENST00000514271 CSGALNACT2Q8N6G5 542 aa7.95□□□□□ -1.14
CLIP1-205ENST00000514271 NOX5Q96PH1 765 aa7.95□□□□□ -1.14
CLIP1-205ENST00000514271 CRISPLD2Q9H0B8 497 aa7.95□□□□□ -1.14
CLIP1-205ENST00000514271 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.95□□□□□ -1.14
CLIP1-205ENST00000514271 COG5Q9UP83 839 aa7.95□□□□□ -1.14
CLIP1-205ENST00000514271 SMCO2A6NFE2 343 aa7.95□□□□□ -1.14
CLIP1-205ENST00000514271 DDX3XO00571 662 aaKnown RBP eCLIP7.95□□□□□ -1.14
CLIP1-205ENST00000514271 GABBR2O75899 941 aa7.95□□□□□ -1.14
CLIP1-205ENST00000514271 IFT88Q13099 833 aa7.95□□□□□ -1.14
CLIP1-205ENST00000514271 KCTD16Q68DU8 428 aa7.95□□□□□ -1.14
CLIP1-205ENST00000514271 NSMFQ6X4W1 530 aa7.95□□□□□ -1.14
CLIP1-205ENST00000514271 PIK3AP1Q6ZUJ8 805 aa7.95□□□□□ -1.14
CLIP1-205ENST00000514271 PCSK9Q8NBP7 692 aaKnown RBP7.95□□□□□ -1.14
CLIP1-205ENST00000514271 OR2W6PQ8NHA6 318 aa7.95□□□□□ -1.14
CLIP1-205ENST00000514271 SCFD1Q8WVM8 642 aa7.95□□□□□ -1.14
CLIP1-205ENST00000514271 GATA6Q92908 595 aa7.95□□□□□ -1.14
CLIP1-205ENST00000514271 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.95□□□□□ -1.14
CLIP1-205ENST00000514271 ARHGEF4Q9NR80 690 aa7.95□□□□□ -1.14
CLIP1-205ENST00000514271 DMAC2Q9NW81 257 aa7.95□□□□□ -1.14
CLIP1-205ENST00000514271 TCEAL9Q9UHQ7 104 aa7.95□□□□□ -1.14
CLIP1-205ENST00000514271 hCG_2014768A0A024R1R8 64 aa7.94□□□□□ -1.14
CLIP1-205ENST00000514271 MACROD2A1Z1Q3 448 aa7.94□□□□□ -1.14
CLIP1-205ENST00000514271 PSMA7O14818 248 aa7.94□□□□□ -1.14
CLIP1-205ENST00000514271 INHAP05111 366 aa7.94□□□□□ -1.14
CLIP1-205ENST00000514271 FAM200BP0CF97 657 aa7.94□□□□□ -1.14
CLIP1-205ENST00000514271 PRKAR2AP13861 404 aaKnown RBP7.94□□□□□ -1.14
CLIP1-205ENST00000514271 NLRP5P59047 1200 aa7.94□□□□□ -1.14
CLIP1-205ENST00000514271 KCNJ2P63252 427 aa7.94□□□□□ -1.14
CLIP1-205ENST00000514271 CEP85LQ5SZL2 805 aa7.94□□□□□ -1.14
CLIP1-205ENST00000514271 KLHL10Q6JEL2 608 aa7.94□□□□□ -1.14
CLIP1-205ENST00000514271 SH2D5Q6ZV89 423 aa7.94□□□□□ -1.14
CLIP1-205ENST00000514271 ARMCX2Q7L311 632 aa7.94□□□□□ -1.14
CLIP1-205ENST00000514271 FITM2Q8N6M3 262 aa7.94□□□□□ -1.14
CLIP1-205ENST00000514271 PSPC1Q8WXF1 523 aaKnown RBP7.94□□□□□ -1.14
CLIP1-205ENST00000514271 VAT1LQ9HCJ6 419 aa7.94□□□□□ -1.14
CLIP1-205ENST00000514271 ABCF3Q9NUQ8 709 aa7.94□□□□□ -1.14
CLIP1-205ENST00000514271 NKX1-2Q9UD57 310 aaPredicted RBP7.94□□□□□ -1.14
CLIP1-205ENST00000514271 NOC2LQ9Y3T9 749 aaKnown RBP7.94□□□□□ -1.14
CLIP1-205ENST00000514271 RIPK3Q9Y572 518 aa7.94□□□□□ -1.14
CLIP1-205ENST00000514271 TSC2P49815 1807 aa7.94□□□□□ -1.14
CLIP1-205ENST00000514271 ASTN1O14525 1302 aa7.94□□□□□ -1.14
CLIP1-205ENST00000514271 MOXD2PA6NHM9 499 aa7.94□□□□□ -1.14
CLIP1-205ENST00000514271 DKC1O60832 514 aaKnown RBP eCLIP7.94□□□□□ -1.14
CLIP1-205ENST00000514271 PPP1R11O60927 126 aaPredicted RBP7.94□□□□□ -1.14
CLIP1-205ENST00000514271 VIMP08670 466 aaKnown RBP7.94□□□□□ -1.14
CLIP1-205ENST00000514271 KRT16P08779 473 aa7.94□□□□□ -1.14
CLIP1-205ENST00000514271 CCND1P24385 295 aa7.94□□□□□ -1.14
CLIP1-205ENST00000514271 ATP1A2P50993 1020 aa7.94□□□□□ -1.14
CLIP1-205ENST00000514271 PTK2Q05397 1052 aa7.94□□□□□ -1.14
CLIP1-205ENST00000514271 C1QTNF12Q5T7M4 302 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms